Contig 002713:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF007A07Sequence558010157 (6)gb|KDP26595.1|9e-62hypothetical protein JCGZ_17753 [Jatropha curcas]709002713 (6)ref|XP_004297483.1|8e-66PREDICTED: probable nucleoredoxin 1 [Fragaria vesca subsp. vesca]
JMFF012F03Sequence443010157 (6)gb|KDP26595.1|1e-39hypothetical protein JCGZ_17753 [Jatropha curcas]777002713 (6)ref|XP_004297483.1|4e-85PREDICTED: probable nucleoredoxin 1 [Fragaria vesca subsp. vesca]
JMFF036O12Sequence530010157 (6)ref|XP_009762378.1|3e-72PREDICTED: probable nucleoredoxin 1 [Nicotiana sylvestris]710002713 (6)ref|XP_004297483.1|2e-68PREDICTED: probable nucleoredoxin 1 [Fragaria vesca subsp. vesca]
JMFF046P03Sequence645010157 (6)ref|XP_009762378.1|9e-85PREDICTED: probable nucleoredoxin 1 [Nicotiana sylvestris]514002713 (6)gb|KJB31218.1|1e-20hypothetical protein B456_005G181700 [Gossypium raimondii]
JMFF047P21Sequence632010157 (6)ref|XP_009762378.1|1e-78PREDICTED: probable nucleoredoxin 1 [Nicotiana sylvestris]612002713 (6)ref|XP_004297483.1|1e-29PREDICTED: probable nucleoredoxin 1 [Fragaria vesca subsp. vesca]
JMSF002D07Sequence256010157 (6)ref|XP_010023554.1|7e-16PREDICTED: probable nucleoredoxin 1 isoform X6 [Eucalyptus grandis] gb|KCW59848.721002713 (6)ref|XP_004297483.1|1e-75PREDICTED: probable nucleoredoxin 1 [Fragaria vesca subsp. vesca]

Alignment

This contig is upended


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rJMFF012F03+                                                         TTCTCTGCTCATT
                      ____________________________________________________________
consensus                                                            TTCTCTGCTCATT
 
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rJMSF002D07+                               TTCTACCAAAACTCATTGAGGCATACCACAATATCAAAG
rJMFF012F03+          GGTGTCCTCCTTGCCGTGCTTTTCTACCAAAACTCATTGAGGCATACCACAATATCAAAG
rJMFF007A07+                                                                 CAAAG
rJMFF036O12+                                                                 CAAAG
                      ____________________________________________________________
consensus             GGTGTCCTCCTTGCCGTGCTTTTCTACCAAAACTCATTGAGGCATACCACAATATCAAAG
 
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rJMSF002D07+          CAAAGGATGATGCATTTGAAGTGATTTTCATCTCCAGTGACAGAGATCAGTCCTCCTTTG
rJMFF012F03+          CAAAGGATGATGCATTTGAAGTGATTTTCATCTCCAGTGACAGAGATCAGTCCTCCTTTG
rJMFF007A07+          CAAAGGATGATGCATTTGAAGTGATTTTCATCTCCAGTGACAGAGATCAGTCCTCCTTTG
rJMFF036O12+          CAAAGGATGATGCATTTGAAGTGATTTTCATCTCCAGTGACAGAGATCAGTCCTCCTTTG
                      ____________________________________________________________
consensus             CAAAGGATGATGCATTTGAAGTGATTTTCATCTCCAGTGACAGAGATCAGTCCTCCTTTG
 
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rJMSF002D07+          ATGAATTCTTTTCTAAGATGCCATGGCTGGCTATTCCTTATGGCGATGATAGGAAGGGAT
rJMFF012F03+          ATGAATTCTTTTCTAAGATGCCATGGCTGGCTATTCCTTATGGCGATGATAGGAAGGGAT
rJMFF007A07+          ATGAATTCTTTTCTAAGATGCCATGGCTGGCTATTCTTTATGGCGATGATAGGAAGGGAT
rJMFF036O12+          ATGAATTCTTTTCTAAGATGCCATGGCTGGCTATTCCTTATGGCGATGATAGGAAGGGAT
rJMFF047P21+                                                         GATAGGAAGGGAT
                      ____________________________________________________________
consensus             ATGAATTCTTTTCTAAGATGCCATGGCTGGCTATTCCTTATGGCGATGATAGGAAGGGAT
 
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rJMSF002D07+          CTTTGAGTCGCCTATTCAAAGTTCGTGGAATCCCAATGTTAGTTGCCATTGGAAGAACAG
rJMFF012F03+          CTTTGAGTCGCCTATTCAAAGTTCGTGGAATCCCAATGTTAGTTGCCATTGGAAGAACAG
rJMFF007A07+          CTTTGAGTCGCCTATTCAAAGTTCGTGGAATCCCAATGTTAGTTGCCATTGGAAGAACAG
rJMFF036O12+          CTTTGAGTCGCCTATTCAAAGTTCGTGGAATCCCAATGTTAGTTGCCATTGGAAGAACAG
rJMFF047P21+          CTNTGAGTCGCCTATTCAAAGTTCGTGGAATCCCAATGTTAGTTGCCATNGGAAGAACAG
                      ____________________________________________________________
consensus             CTTTGAGTCGCCTATTCAAAGTTCGTGGAATCCCAATGTTAGTTGCCATTGGAAGAACAG
 
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rJMSF002D07+          GCCGAACTCTCACCACTGAAGCTAGAAATTTGGTGATGAGTCATGGTGCTGATGCTTATC
rJMFF012F03+          GCCGAACTCTCACCACTGAAGCTAGAAATTTGGTGATGAGTCATGGTGCTGATGCTTATC
rJMFF007A07+          GCCGAACTCTCACCACTGAAGCTAGAAATTTGGTGATGAGTCATGGTGCTGATGCTTATC
rJMFF036O12+          GCCGAACTCTCACCACTGAAGCTAGAAATTTGGTGATGAGTCATGGTGCTGATGCTTATC
rJMFF046P03+                            AAGCTAGAAATTGGGTGATGAGTCATGGTGCTGATGCTATCC
rJMFF047P21+          GCCGAACTCTCACCACTGAAGCTAGAAATTTGGTGNTGAGTCATGGTGCTGATGCTTATC
                      ____________________________________________________________
consensus             GCCGAACTCTCACCACTGAAGCTAGAAATTTGGTGATGAGTCATGGTGCTGATGCTTATC
 
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rJMSF002D07+          CCTTCACGGAAGAGCGTTTGAAGGAGCTTGAAGCTGAATATGAAGAGATGGCAAAGGGGT
rJMFF012F03+          CCTTCACGGAAGAGCGTTTGAAGGAGCTTGAAGCTGAATATGAAGAGATGGCAAAGTGGT
rJMFF007A07+          CCTTCACGGAAGAGCGTTTGAAGGAGCTTGAAGCTGAATATGAAGAGATGGCAAAGTGGT
rJMFF036O12+          CCTTCACGGAAGAGCGTTTGAAGGAGCTTGAAGCTGAATATGAAGAGATGGCAAAGGGGT
rJMFF046P03+          CCTTCACGGAAGAGCGTTGNAAGGAGCTTGAAGCTGAATATGAAGAGATGGCAAAGGGGT
rJMFF047P21+          CCTTCACGGAAGAGCGTTTGAAGGAGCTTGAAGCTGAATATGAAGAGATGGCAAAGGGGT
                      ____________________________________________________________
consensus             CCTTCACGGAAGAGCGTTTGAAGGAGCTTGAAGCTGAATATGAAGAGATGGCAAAGGGGT
 
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rJMSF002D07+          GGCCTGAGAAAATGAATCATGCCCTTCATGAAGAACATGAGCTTTTGCTTACAAGACGCC
rJMFF012F03+          GGCCTGAGAAAATGAATCATGCCCTTCATGAAGAACATGAGCTTTTGCTTACAAGACGCC
rJMFF007A07+          GGCCTGAGAAAATGAATCATGCCCTTCATGAAGAACATGAGCTTTTGCTTACAAGACGCC
rJMFF036O12+          GGCCTGAGAAAATGAATCATGCCCTTCATGAAGAACATGAGCTTTTGCTTACAAGACGCC
rJMFF046P03+          GGCCTGAGAAAATGAATCATGCCCTTCATGAAGAACATGAGCTTTTGCTTACAAGAC-CC
rJMFF047P21+          GGCCTGAGAAAATGAATCATGCCCTTCATGAAGAACATGAGCTTTTGCTTACAAGAC-CC
                      ____________________________________________________________
consensus             GGCCTGAGAAAATGAATCATGCCCTTCATGAAGAACATGAGCTTTTGCTTACAAGACGCC
 
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rJMSF002D07+          AGCATTATACTTGTGATGGATGCAATGAAGGGGGACAAGGTTGGTCATTCTATTGTGATG
rJMFF012F03+          AGCATTATACTTGTGATGGATGCAATGAAGGGGGACAAGGTTGGTCATTCTATTGTGATG
rJMFF007A07+          AGCATTATACTTGTGATGGATGCAATGAAGGGGGACAAGGTTGGTCATTCTATTGTGATG
rJMFF036O12+          AGCATTATACTTGTGATGGATGCAATGAAGGGGGACAAGGTTGGTCATTCTATTGTGATG
rJMFF046P03+          AGCATTATACTTGTGATGGATGCAATGAAGGGGGACAAGGTTGGTCATTCTATTGTGATG
rJMFF047P21+          AGCATTATACTTGTGATGGATGCAATGAAGGGGGACAAGGTTGGTCATTCTATTGTGATG
                      ____________________________________________________________
consensus             AGCATTATACTTGTGATGGATGCAATGAAGGGGGACAAGGTTGGTCATTCTATTGTGATG
 
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rJMSF002D07+          ATTGTGACTTTGACCTCCACCCAAAATGTGCTTTGGAAGAAAAAAAGGAAGAGCCCACAG
rJMFF012F03+          ATTGTGACTTTGACCTCCACCCAAAATGTGCTTTGGAAGAAAAAAAGGAAGAGCCCACAG
rJMFF007A07+          ATTGTGACTTTGACCTCCACCCAAAATGTGCTTTGGAAGAAAAAAAGGAAGAGCCCACAG
rJMFF036O12+          ATTGTGACTTTGACCTCCACCCAAAATGTGCTTTGGAAGAAAAAAAGGAAGAGCCCACAG
rJMFF046P03+          ATTGTGACTTTGACCTCCACCCAAAATGTGCTTTGGAAGAAAAAAAGGAAGAGCCCACAG
rJMFF047P21+          ATTGTGACTTTGACCTCCACCCAAAATGTGCTTTGGAAGAAAAAAAGGAAGAGCCCACAG
                      ____________________________________________________________
consensus             ATTGTGACTTTGACCTCCACCCAAAATGTGCTTTGGAAGAAAAAAAGGAAGAGCCCACAG
 
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rJMSF002D07+          AAGAGGAGAGCCAGAAAGATGATGAGAAAACAAAGGAGGGCTGGGTTTGTGATGGTGAAG
rJMFF012F03+          AAGAGGAGAGCCAGAAAGATGATGAGAAAACAAAGGAGGGCTGGGTTTGTGATGGTGAAG
rJMFF007A07+          AAGAGGAGAGCCAGAAAGATGATGAGAAAACAAAGGAGGGCTGGGTTTGTGATGGTGAAG
rJMFF036O12+          AAGAGGAGAGCCAGAAAGATGATGAGAAAACAAAGGAGGGCTGGGTTTGTGATGGTGAAG
rJMFF046P03+          AAGAGGAGAGCCAGAAAGATGATGAGAAAACAAAGGAGGGCTGGGTTTGTGATGGTGAAG
rJMFF047P21+          AAGAGGAGAGCCAGAAAGATGATGAGAAAACAAAGGAGGGCTGGGTTTGTGATGGTGAAG
                      ____________________________________________________________
consensus             AAGAGGAGAGCCAGAAAGATGATGAGAAAACAAAGGAGGGCTGGGTTTGTGATGGTGAAG
 
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rJMSF002D07+          TTTGTAAGAAAGCTTAAGAAGTTTTTCGAGGTCTGTGGATTGTTATTATTGCCATATTGC
rJMFF012F03+          TTTGTAAGAAAGCTTAAGAAGTTTTTCGAGGTCTGTGGATTGTTATTATTGCCATATTGC
rJMFF007A07+          TTTGTAAGAAAGCTTAAGAAGTTTTTCGAGGTCTGTGGATTGTTATTATTGCCATATTGC
rJMFF036O12+          TTTGTAAGAAAGCTTAAGAAGTTTTTCGAGGTCTGTGGATTGTTATTATTGCCATATTGC
rJMFF046P03+          TTTGTAAGAAAGCTTAAGAAGTTTTTCGAGGTCTGTGGATTGTTATTATTGCCATATTGC
rJMFF047P21+          TTTGTAAGAAAGCTTAAGAAGTTTTTCGAGGTCTGTGGATTGTTATTATTGCCATATTGC
                      ____________________________________________________________
consensus             TTTGTAAGAAAGCTTAAGAAGTTTTTCGAGGTCTGTGGATTGTTATTATTGCCATATTGC
 
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rJMSF002D07+          ATATGCTGAGCTGTTTAATTCTTATATCCATCATATACTCATATTTATTAC         
rJMFF012F03+          ATATGCTGAGCTGTTTAATTCTTATATCCATCATATACTCATATTTATTACGGAGTACTA
rJMFF007A07+          ATATGCTGAGCTGTTTAATTCTTATATCCATCATATACTCATATTTATTACGGAGTACTA
rJMFF036O12+          ATATGCTGAGCTGTTTAATTCTTATATCCATCATATACTCATATTTATTACGGAGTACTA
rJMFF046P03+          ATATGCTGAGCTGTTTAATTCTTATATCCATCATATACTCATATTTATTACGGAGTACTA
rJMFF047P21+          ATATGCTGAGCTGTTTAATTCTTATATCCATCATATACTCATATTTATTACGGAGTACTA
                      ____________________________________________________________
consensus             ATATGCTGAGCTGTTTAATTCTTATATCCATCATATACTCATATTTATTACGGAGTACTA
 
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rJMFF012F03+          GGTTAATGCTGTATCAACCCTTACTTTGTGTGATGTATCCCCAA                
rJMFF007A07+          GGTTAATGCTGTATCAACCCTTACTTTGTGTGATGTATCCCCAA                
rJMFF036O12+          GGTTAATGCTGTATCAACCCTTACTTTGTGTGATGTATCCCCAA                
rJMFF046P03+          GGTTAATGCTGTATCAACCCTTACTTTGTGTGATGTATCCCCAATAAAACTGG       
rJMFF047P21+          GGTTAATGCTGTATCAACCCTTACTTTGTGTGATGTATCCCCAATAAAACTGGTTTTCCG
                      ____________________________________________________________
consensus             GGTTAATGCTGTATCAACCCTTACTTTGTGTGATGTATCCCCAATAAAACTGGTTTTCCG