Contig 002713:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF007A07Sequence558010157 (6)gb|KDP26595.1|9e-62hypothetical protein JCGZ_17753 [Jatropha curcas]709002713 (6)ref|XP_004297483.1|8e-66PREDICTED: probable nucleoredoxin 1 [Fragaria vesca subsp. vesca]
JMFF012F03Sequence443010157 (6)gb|KDP26595.1|1e-39hypothetical protein JCGZ_17753 [Jatropha curcas]777002713 (6)ref|XP_004297483.1|4e-85PREDICTED: probable nucleoredoxin 1 [Fragaria vesca subsp. vesca]
JMFF036O12Sequence530010157 (6)ref|XP_009762378.1|3e-72PREDICTED: probable nucleoredoxin 1 [Nicotiana sylvestris]710002713 (6)ref|XP_004297483.1|2e-68PREDICTED: probable nucleoredoxin 1 [Fragaria vesca subsp. vesca]
JMFF046P03Sequence645010157 (6)ref|XP_009762378.1|9e-85PREDICTED: probable nucleoredoxin 1 [Nicotiana sylvestris]514002713 (6)gb|KJB31218.1|1e-20hypothetical protein B456_005G181700 [Gossypium raimondii]
JMFF047P21Sequence632010157 (6)ref|XP_009762378.1|1e-78PREDICTED: probable nucleoredoxin 1 [Nicotiana sylvestris]612002713 (6)ref|XP_004297483.1|1e-29PREDICTED: probable nucleoredoxin 1 [Fragaria vesca subsp. vesca]
JMSF002D07Sequence256010157 (6)ref|XP_010023554.1|7e-16PREDICTED: probable nucleoredoxin 1 isoform X6 [Eucalyptus grandis] gb|KCW59848.721002713 (6)ref|XP_004297483.1|1e-75PREDICTED: probable nucleoredoxin 1 [Fragaria vesca subsp. vesca]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF012F03+ TTCTCTGCTCATT
                      ____________________________________________________________
consensus TTCTCTGCTCATT
 
. : . : . : . : . : . :
rJMSF002D07+ TTCTACCAAAACTCATTGAGGCATACCACAATATCAAAG
rJMFF012F03+ GGTGTCCTCCTTGCCGTGCTTTTCTACCAAAACTCATTGAGGCATACCACAATATCAAAG
rJMFF007A07+ CAAAG
rJMFF036O12+ CAAAG
                      ____________________________________________________________
consensus GGTGTCCTCCTTGCCGTGCTTTTCTACCAAAACTCATTGAGGCATACCACAATATCAAAG
 
. : . : . : . : . : . :
rJMSF002D07+ CAAAGGATGATGCATTTGAAGTGATTTTCATCTCCAGTGACAGAGATCAGTCCTCCTTTG
rJMFF012F03+ CAAAGGATGATGCATTTGAAGTGATTTTCATCTCCAGTGACAGAGATCAGTCCTCCTTTG
rJMFF007A07+ CAAAGGATGATGCATTTGAAGTGATTTTCATCTCCAGTGACAGAGATCAGTCCTCCTTTG
rJMFF036O12+ CAAAGGATGATGCATTTGAAGTGATTTTCATCTCCAGTGACAGAGATCAGTCCTCCTTTG
                      ____________________________________________________________
consensus CAAAGGATGATGCATTTGAAGTGATTTTCATCTCCAGTGACAGAGATCAGTCCTCCTTTG
 
. : . : . : . : . : . :
rJMSF002D07+ ATGAATTCTTTTCTAAGATGCCATGGCTGGCTATTCCTTATGGCGATGATAGGAAGGGAT
rJMFF012F03+ ATGAATTCTTTTCTAAGATGCCATGGCTGGCTATTCCTTATGGCGATGATAGGAAGGGAT
rJMFF007A07+ ATGAATTCTTTTCTAAGATGCCATGGCTGGCTATTCTTTATGGCGATGATAGGAAGGGAT
rJMFF036O12+ ATGAATTCTTTTCTAAGATGCCATGGCTGGCTATTCCTTATGGCGATGATAGGAAGGGAT
rJMFF047P21+ GATAGGAAGGGAT
                      ____________________________________________________________
consensus ATGAATTCTTTTCTAAGATGCCATGGCTGGCTATTCCTTATGGCGATGATAGGAAGGGAT
 
. : . : . : . : . : . :
rJMSF002D07+ CTTTGAGTCGCCTATTCAAAGTTCGTGGAATCCCAATGTTAGTTGCCATTGGAAGAACAG
rJMFF012F03+ CTTTGAGTCGCCTATTCAAAGTTCGTGGAATCCCAATGTTAGTTGCCATTGGAAGAACAG
rJMFF007A07+ CTTTGAGTCGCCTATTCAAAGTTCGTGGAATCCCAATGTTAGTTGCCATTGGAAGAACAG
rJMFF036O12+ CTTTGAGTCGCCTATTCAAAGTTCGTGGAATCCCAATGTTAGTTGCCATTGGAAGAACAG
rJMFF047P21+ CTNTGAGTCGCCTATTCAAAGTTCGTGGAATCCCAATGTTAGTTGCCATNGGAAGAACAG
                      ____________________________________________________________
consensus CTTTGAGTCGCCTATTCAAAGTTCGTGGAATCCCAATGTTAGTTGCCATTGGAAGAACAG
 
. : . : . : . : . : . :
rJMSF002D07+ GCCGAACTCTCACCACTGAAGCTAGAAATTTGGTGATGAGTCATGGTGCTGATGCTTATC
rJMFF012F03+ GCCGAACTCTCACCACTGAAGCTAGAAATTTGGTGATGAGTCATGGTGCTGATGCTTATC
rJMFF007A07+ GCCGAACTCTCACCACTGAAGCTAGAAATTTGGTGATGAGTCATGGTGCTGATGCTTATC
rJMFF036O12+ GCCGAACTCTCACCACTGAAGCTAGAAATTTGGTGATGAGTCATGGTGCTGATGCTTATC
rJMFF046P03+ AAGCTAGAAATTGGGTGATGAGTCATGGTGCTGATGCTATCC
rJMFF047P21+ GCCGAACTCTCACCACTGAAGCTAGAAATTTGGTGNTGAGTCATGGTGCTGATGCTTATC
                      ____________________________________________________________
consensus GCCGAACTCTCACCACTGAAGCTAGAAATTTGGTGATGAGTCATGGTGCTGATGCTTATC
 
. : . : . : . : . : . :
rJMSF002D07+ CCTTCACGGAAGAGCGTTTGAAGGAGCTTGAAGCTGAATATGAAGAGATGGCAAAGGGGT
rJMFF012F03+ CCTTCACGGAAGAGCGTTTGAAGGAGCTTGAAGCTGAATATGAAGAGATGGCAAAGTGGT
rJMFF007A07+ CCTTCACGGAAGAGCGTTTGAAGGAGCTTGAAGCTGAATATGAAGAGATGGCAAAGTGGT
rJMFF036O12+ CCTTCACGGAAGAGCGTTTGAAGGAGCTTGAAGCTGAATATGAAGAGATGGCAAAGGGGT
rJMFF046P03+ CCTTCACGGAAGAGCGTTGNAAGGAGCTTGAAGCTGAATATGAAGAGATGGCAAAGGGGT
rJMFF047P21+ CCTTCACGGAAGAGCGTTTGAAGGAGCTTGAAGCTGAATATGAAGAGATGGCAAAGGGGT
                      ____________________________________________________________
consensus CCTTCACGGAAGAGCGTTTGAAGGAGCTTGAAGCTGAATATGAAGAGATGGCAAAGGGGT
 
. : . : . : . : . : . :
rJMSF002D07+ GGCCTGAGAAAATGAATCATGCCCTTCATGAAGAACATGAGCTTTTGCTTACAAGACGCC
rJMFF012F03+ GGCCTGAGAAAATGAATCATGCCCTTCATGAAGAACATGAGCTTTTGCTTACAAGACGCC
rJMFF007A07+ GGCCTGAGAAAATGAATCATGCCCTTCATGAAGAACATGAGCTTTTGCTTACAAGACGCC
rJMFF036O12+ GGCCTGAGAAAATGAATCATGCCCTTCATGAAGAACATGAGCTTTTGCTTACAAGACGCC
rJMFF046P03+ GGCCTGAGAAAATGAATCATGCCCTTCATGAAGAACATGAGCTTTTGCTTACAAGAC-CC
rJMFF047P21+ GGCCTGAGAAAATGAATCATGCCCTTCATGAAGAACATGAGCTTTTGCTTACAAGAC-CC
                      ____________________________________________________________
consensus GGCCTGAGAAAATGAATCATGCCCTTCATGAAGAACATGAGCTTTTGCTTACAAGACGCC
 
. : . : . : . : . : . :
rJMSF002D07+ AGCATTATACTTGTGATGGATGCAATGAAGGGGGACAAGGTTGGTCATTCTATTGTGATG
rJMFF012F03+ AGCATTATACTTGTGATGGATGCAATGAAGGGGGACAAGGTTGGTCATTCTATTGTGATG
rJMFF007A07+ AGCATTATACTTGTGATGGATGCAATGAAGGGGGACAAGGTTGGTCATTCTATTGTGATG
rJMFF036O12+ AGCATTATACTTGTGATGGATGCAATGAAGGGGGACAAGGTTGGTCATTCTATTGTGATG
rJMFF046P03+ AGCATTATACTTGTGATGGATGCAATGAAGGGGGACAAGGTTGGTCATTCTATTGTGATG
rJMFF047P21+ AGCATTATACTTGTGATGGATGCAATGAAGGGGGACAAGGTTGGTCATTCTATTGTGATG
                      ____________________________________________________________
consensus AGCATTATACTTGTGATGGATGCAATGAAGGGGGACAAGGTTGGTCATTCTATTGTGATG
 
. : . : . : . : . : . :
rJMSF002D07+ ATTGTGACTTTGACCTCCACCCAAAATGTGCTTTGGAAGAAAAAAAGGAAGAGCCCACAG
rJMFF012F03+ ATTGTGACTTTGACCTCCACCCAAAATGTGCTTTGGAAGAAAAAAAGGAAGAGCCCACAG
rJMFF007A07+ ATTGTGACTTTGACCTCCACCCAAAATGTGCTTTGGAAGAAAAAAAGGAAGAGCCCACAG
rJMFF036O12+ ATTGTGACTTTGACCTCCACCCAAAATGTGCTTTGGAAGAAAAAAAGGAAGAGCCCACAG
rJMFF046P03+ ATTGTGACTTTGACCTCCACCCAAAATGTGCTTTGGAAGAAAAAAAGGAAGAGCCCACAG
rJMFF047P21+ ATTGTGACTTTGACCTCCACCCAAAATGTGCTTTGGAAGAAAAAAAGGAAGAGCCCACAG
                      ____________________________________________________________
consensus ATTGTGACTTTGACCTCCACCCAAAATGTGCTTTGGAAGAAAAAAAGGAAGAGCCCACAG
 
. : . : . : . : . : . :
rJMSF002D07+ AAGAGGAGAGCCAGAAAGATGATGAGAAAACAAAGGAGGGCTGGGTTTGTGATGGTGAAG
rJMFF012F03+ AAGAGGAGAGCCAGAAAGATGATGAGAAAACAAAGGAGGGCTGGGTTTGTGATGGTGAAG
rJMFF007A07+ AAGAGGAGAGCCAGAAAGATGATGAGAAAACAAAGGAGGGCTGGGTTTGTGATGGTGAAG
rJMFF036O12+ AAGAGGAGAGCCAGAAAGATGATGAGAAAACAAAGGAGGGCTGGGTTTGTGATGGTGAAG
rJMFF046P03+ AAGAGGAGAGCCAGAAAGATGATGAGAAAACAAAGGAGGGCTGGGTTTGTGATGGTGAAG
rJMFF047P21+ AAGAGGAGAGCCAGAAAGATGATGAGAAAACAAAGGAGGGCTGGGTTTGTGATGGTGAAG
                      ____________________________________________________________
consensus AAGAGGAGAGCCAGAAAGATGATGAGAAAACAAAGGAGGGCTGGGTTTGTGATGGTGAAG
 
. : . : . : . : . : . :
rJMSF002D07+ TTTGTAAGAAAGCTTAAGAAGTTTTTCGAGGTCTGTGGATTGTTATTATTGCCATATTGC
rJMFF012F03+ TTTGTAAGAAAGCTTAAGAAGTTTTTCGAGGTCTGTGGATTGTTATTATTGCCATATTGC
rJMFF007A07+ TTTGTAAGAAAGCTTAAGAAGTTTTTCGAGGTCTGTGGATTGTTATTATTGCCATATTGC
rJMFF036O12+ TTTGTAAGAAAGCTTAAGAAGTTTTTCGAGGTCTGTGGATTGTTATTATTGCCATATTGC
rJMFF046P03+ TTTGTAAGAAAGCTTAAGAAGTTTTTCGAGGTCTGTGGATTGTTATTATTGCCATATTGC
rJMFF047P21+ TTTGTAAGAAAGCTTAAGAAGTTTTTCGAGGTCTGTGGATTGTTATTATTGCCATATTGC
                      ____________________________________________________________
consensus TTTGTAAGAAAGCTTAAGAAGTTTTTCGAGGTCTGTGGATTGTTATTATTGCCATATTGC
 
. : . : . : . : . : . :
rJMSF002D07+ ATATGCTGAGCTGTTTAATTCTTATATCCATCATATACTCATATTTATTAC
rJMFF012F03+ ATATGCTGAGCTGTTTAATTCTTATATCCATCATATACTCATATTTATTACGGAGTACTA
rJMFF007A07+ ATATGCTGAGCTGTTTAATTCTTATATCCATCATATACTCATATTTATTACGGAGTACTA
rJMFF036O12+ ATATGCTGAGCTGTTTAATTCTTATATCCATCATATACTCATATTTATTACGGAGTACTA
rJMFF046P03+ ATATGCTGAGCTGTTTAATTCTTATATCCATCATATACTCATATTTATTACGGAGTACTA
rJMFF047P21+ ATATGCTGAGCTGTTTAATTCTTATATCCATCATATACTCATATTTATTACGGAGTACTA
                      ____________________________________________________________
consensus ATATGCTGAGCTGTTTAATTCTTATATCCATCATATACTCATATTTATTACGGAGTACTA
 
. : . : . : . : . : . :
rJMFF012F03+ GGTTAATGCTGTATCAACCCTTACTTTGTGTGATGTATCCCCAA
rJMFF007A07+ GGTTAATGCTGTATCAACCCTTACTTTGTGTGATGTATCCCCAA
rJMFF036O12+ GGTTAATGCTGTATCAACCCTTACTTTGTGTGATGTATCCCCAA
rJMFF046P03+ GGTTAATGCTGTATCAACCCTTACTTTGTGTGATGTATCCCCAATAAAACTGG
rJMFF047P21+ GGTTAATGCTGTATCAACCCTTACTTTGTGTGATGTATCCCCAATAAAACTGGTTTTCCG
                      ____________________________________________________________
consensus GGTTAATGCTGTATCAACCCTTACTTTGTGTGATGTATCCCCAATAAAACTGGTTTTCCG