Contig 002711:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF019K21Sequence523018428gb|AGJ98225.1|1e-36BIN2-like protein PSK8 [Petunia x hybrida]719002711 (4)ref|XP_007211435.1|2e-72hypothetical protein PRUPE_ppa007161mg [Prunus persica] gb|EMJ12634.1| hypotheti
JMFF038J11Sequence515007482 (3)gb|KDO63405.1|8e-62hypothetical protein CISIN_1g014750mg [Citrus sinensis]719002711 (4)ref|XP_007211435.1|1e-74hypothetical protein PRUPE_ppa007161mg [Prunus persica] gb|EMJ12634.1| hypotheti
JMFF047L15Sequence620007482 (3)dbj|BAJ33892.1|1e-74unnamed protein product [Thellungiella halophila]550002711 (4)ref|XP_007048725.1|2e-09SHAGGY-related protein kinase dZeta isoform 1 [Theobroma cacao] gb|EOX92882.1| S
JMSF010G14Sequence405007482 (3)gb|AGJ98225.1|1e-26BIN2-like protein PSK8 [Petunia x hybrida]729002711 (4)ref|XP_007211435.1|1e-74hypothetical protein PRUPE_ppa007161mg [Prunus persica] gb|EMJ12634.1| hypotheti

Alignment

This contig is upended


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rJMFF038J11+                                           ACGAGAAGAAATTCGATGTATGAACCC
rJMFF019K21+                                                   AAATTCGATGTATGAACCC
rJMSF010G14+                                           ACGAGAAGAAATTCGATGTATGAACCC
                      ____________________________________________________________
consensus                                              ACGAGAAGAAATTCGATGTATGAACCC
 
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rJMFF038J11+          AAATTATACTGATTTTAGATTCCCACAAATCAAAGCTCATCCTTGGCATAAGGTTTTCCA
rJMFF019K21+          AAATTATACTGATTTTAGATTCCCACAAATCAAAGCTCATCCTTGGCATAAGGTTTTCCA
rJMSF010G14+          AAATTATACTGATTTTAGATTCCCACAAATCAAAGCTCATCCTTGGCATAAGGTTTTCCA
                      ____________________________________________________________
consensus             AAATTATACTGATTTTAGATTCCCACAAATCAAAGCTCATCCTTGGCATAAGGTTTTCCA
 
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rJMFF038J11+          CAAAAGAATGCCCCCTGAAGCAATTGATCTAGCTTCCCGGCTACTCCAATACTCACCAAG
rJMFF019K21+          CAAAAGAATGCCCCCTGAAGCAATTGATCTAGCTTCCCGGCTACTCCAATACTCACCAAG
rJMSF010G14+          CAAAAGAATGCCCCCTGAAGCAATTGATCTAGCTTCCCGGCTACTCCAATACTCACCAAG
                      ____________________________________________________________
consensus             CAAAAGAATGCCCCCTGAAGCAATTGATCTAGCTTCCCGGCTACTCCAATACTCACCAAG
 
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rJMFF038J11+          TCTCCGCTGTACTGCTCTAGAAGCATGTGCACATCCCTTCTTTGATGAGCTCCGGGAGCC
rJMFF019K21+          TCTCCGCTGTACTGCTCTAGAAGCATGTGCACATCCCTTCTTTGATGAGCTCCGGGAGCC
rJMSF010G14+          TCTCCGCTGTACTGCTCTAGAAGCATGTGCACATCCCTTCTTTGATGAGCTCCGGGAGCC
                      ____________________________________________________________
consensus             TCTCCGCTGTACTGCTCTAGAAGCATGTGCACATCCCTTCTTTGATGAGCTCCGGGAGCC
 
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rJMFF038J11+          CAATGCCCGCCTCCCAAATGGTCGCCCTTTCCCACCACTCTTCAACTTCAAGCAGGAATT
rJMFF019K21+          CAATGCCCGCCTCCCAAATGGTCGCCCTTTCCCACCACTCTTCAACTTCAAGCAGGAATT
rJMSF010G14+          CAATGCCCGCCTCCCAAATGGTCGCCCTTTCCCACCACTCTTCAACTTCAAGCAGGAATT
rJMFF047L15+                                                            AGCAGGAATT
                      ____________________________________________________________
consensus             CAATGCCCGCCTCCCAAATGGTCGCCCTTTCCCACCACTCTTCAACTTCAAGCAGGAATT
 
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rJMFF038J11+          AGCTGGAGCTTCACCTGAGTTGATCAACCGGTTGATACCAGAGCATGTCCGACGGCAGAT
rJMFF019K21+          AGCTGGAGCTTCACCTGAGTTGATCAACCGGTTGATACCAGAGCATGTCCGACGGCAGAT
rJMSF010G14+          AGCTGGAGCTTCACCTGAGTTGATCAACCGGTTGATACCAGAGCATGTCCGACGGCAGAT
rJMFF047L15+          AGCTGGAGCTTCACCTGAGTTGATCAACCGGTTGATACCAGAGCATGTCCGACGGCAGAT
                      ____________________________________________________________
consensus             AGCTGGAGCTTCACCTGAGTTGATCAACCGGTTGATACCAGAGCATGTCCGACGGCAGAT
 
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rJMFF038J11+          GGGTTTGAACTTTCCCCATCCTGGTGGACCCTAATCACATTAGTGAAGAATATGAAGTAC
rJMFF019K21+          GGGTTTGAACTTTCCCCATCCTGGTGGACCCTAATCACATTAGTGAAGAATATGAAGTAC
rJMSF010G14+          GGGTTTGAACTTTCCCCATCCTGGTGGACCCTAATCACATTAGTGAAGAATATGAAGTAC
rJMFF047L15+          GGGTTTGAACTTTCCCCATCCTGGTGGACCCTAATCCCATTAGTGAAGAATATGAAGTCC
                      ____________________________________________________________
consensus             GGGTTTGAACTTTCCCCATCCTGGTGGACCCTAATCACATTAGTGAAGAATATGAAGTAC
 
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rJMFF038J11+          CTGTTCCAGAGGATGGATGTGAAATTATAGCAAGCAATGTTTGTTAATGTAACGGAACGG
rJMFF019K21+          CTGTTCCAGAGGATGGATGTGAAATTATAGCAAGCAATGTTTGTTAATGTAACGGAACGG
rJMSF010G14+          CTGTTCCAGAGGATGGATGTGAAATTATAGCAAGCAATGTTTGTTAATGTAACGGAACGG
rJMFF047L15+          CTGTTCCAGAGGATGGATGTGAAATTATAGCAAGCAATGTTTGTTAATGTAACGGAACGG
                      ____________________________________________________________
consensus             CTGTTCCAGAGGATGGATGTGAAATTATAGCAAGCAATGTTTGTTAATGTAACGGAACGG
 
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rJMFF038J11+          AATGGAGGTGTTTTGGCCCAACCCACGGTTATATACACCCGTAAAAGTTGTATGCTTGTA
rJMFF019K21+          AATGGAGGTGTTTTGGCCCAACCCACGGTTATATACACCCGTAAAAGTTGTATGCTTGTA
rJMSF010G14+          AATGGAGGTGTTTTGGCCCAACCCACGGTTATATACACCCGTAAAAGTTGTATGCTTGTA
rJMFF047L15+          AATGGAGGTGTTTTGGCCCAACCCCCGGTTATATACACCCGTAAAAGTTGTATGCTTGTA
                      ____________________________________________________________
consensus             AATGGAGGTGTTTTGGCCCAACCCACGGTTATATACACCCGTAAAAGTTGTATGCTTGTA
 
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rJMFF038J11+          CTGGCTCTTCAGCCTTCAGTGTTCAGCTCCACTGGGAAAATTTGTGGTGCTGTGTACTAT
rJMFF019K21+          CTGGCTCTTCAGCCTTCAGTGTTCAGCTCCACTGGGAAAATTTGTGGTGCTGTGTACTAT
rJMSF010G14+          CTGGCTCTTCAGCCTTCAGTGTTCAGCTCCACTGGGAAAATTTGTGGTGCTGTGTACTAT
rJMFF047L15+          CTGGCTCTTCAGCCTTCAGTGTTCAGCTCCACTGGGAAAATTTGTGGTGCTGTGTACTAT
                      ____________________________________________________________
consensus             CTGGCTCTTCAGCCTTCAGTGTTCAGCTCCACTGGGAAAATTTGTGGTGCTGTGTACTAT
 
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rJMFF038J11+          ATGTGGTTTTAGCCAAGGAAACCTATTACCTCGCCTGTACATTGTTTTGGTCAAGGGACT
rJMFF019K21+          ATGTGGTTTTAGCCAAGGAAACCTATTACCTCGCCTGTACATTGTTTTGGTCAAGGGACT
rJMSF010G14+          ATGTGGTTTTAGCCAAGGAAACCTATTACCTCGCCTGTACATTGTTTTGGTCAAGGGACT
rJMFF047L15+          ATGTGGTTTTAGCCAAGGAAACCTATTACCTCGCCTGTACATTGTTTTGGTCAAGGGACT
                      ____________________________________________________________
consensus             ATGTGGTTTTAGCCAAGGAAACCTATTACCTCGCCTGTACATTGTTTTGGTCAAGGGACT
 
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rJMFF038J11+          TTAGAGATTTAGGAGTACCAAAAGACAGCTGCTATTCGTGTCTAGTTAGGCAGATTTGCT
rJMFF019K21+          TTAGAGATTTAGGAGTACCAAAAGACAGCTGCTATTCGTGTCTAGTTAGGCAGATTTGCT
rJMSF010G14+          TTAGAGATTTAGGAGTACCAAAAGACAGCTGCTATTCGTGTCTAGTTAGGCAGATTTGCT
rJMFF047L15+          TTAGAGATTTAGGAGTACCAAAAGACAGCTGCTATTCGTGTTTAGTTAGGCAGATTTGCT
                      ____________________________________________________________
consensus             TTAGAGATTTAGGAGTACCAAAAGACAGCTGCTATTCGTGTCTAGTTAGGCAGATTTGCT
 
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rJMFF038J11+          TCAGAGACAATTAGCGCACCAAGAGGCTTAT                             
rJMFF019K21+          TCAGAGACAATTAGCGCACCAAGAGGCTTAT                             
rJMSF010G14+          TCAGAGACAATTAGCGCACCAAGAGGCTTAT                             
rJMFF047L15+          TCAGAGACAATTAGCGCCCCAAGAGGCTTATTGTAGCTTGGTTTGTGTTTTATTTAAATG
                      ____________________________________________________________
consensus             TCAGAGACAATTAGCGCACCAAGAGGCTTATTGTAGCTTGGTTTGTGTTTTATTTAAATG
 
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rJMFF047L15+          CCATTGTTCCTAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCTCTCCAGGGT
                      ____________________________________________________________
consensus             CCATTGTTCCTAGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCTCCAGGGT