Contig 002710:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF020H18Sequence559000133 (4)ref|XP_009757764.1|137PREDICTED: uncharacterized protein LOC104210539 [Nicotiana sylvestris]801002710 (5)ref|XP_009757764.1|296PREDICTED: uncharacterized protein LOC104210539 [Nicotiana sylvestris]
JMFF025B07Sequence565000133 (4)ref|XP_009757764.1|137PREDICTED: uncharacterized protein LOC104210539 [Nicotiana sylvestris]696002710 (5)ref|XP_009757764.1|282PREDICTED: uncharacterized protein LOC104210539 [Nicotiana sylvestris]
JMFF047L04Sequence535000133 (4)ref|XP_011074176.1|98.2PREDICTED: uncharacterized protein LOC105158952 [Sesamum indicum]481002710 (5)ref|XP_009757764.1|130PREDICTED: uncharacterized protein LOC104210539 [Nicotiana sylvestris]
JMFF049E01Sequence480000133 (4)ref|XP_011074176.1|86.7PREDICTED: uncharacterized protein LOC105158952 [Sesamum indicum]344002710 (5)
JMSF020B10Sequence641021042ref|XP_010275705.1|89.0PREDICTED: uncharacterized protein LOC104610671 [Nelumbo nucifera]812002710 (5)ref|XP_009757764.1|169PREDICTED: uncharacterized protein LOC104210539 [Nicotiana sylvestris]

Alignment

This contig is upended


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rJMSF020B10+                                              GCAAATGCTACTCCCAGCAACAAA
                      ____________________________________________________________
consensus                                                 GCAAATGCTACTCCCAGCAACAAA
 
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rJMSF020B10+          ACTGGACTGCGAATGTATCAGCAAGCTGTTGCTGGCATGAGCCAAATTTTCATTTGGTGA
rJMFF025B07+                                                                    GA
rJMFF020H18+                            CAGCAAGCTGTTGCTGGCATGAGCCCAAATTTCATTTGGTGA
                      ____________________________________________________________
consensus             ACTGGACTGCGAATGTATCAGCAAGCTGTTGCTGGCATGAGCCCAATTTTCATTTGGTGA
 
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rJMSF020B10+          AGATGAAGCTGTTTCACCGAAGAAGCCAACTTCACTGCCTGAAGTGGCAAAGCAGCGGGA
rJMFF025B07+          AGATGAAGCTGTTTCACCGAAGAAGCCAACTTCACTGCNTGAAGTGGCAAAGCAGCGGGA
rJMFF020H18+          AGATGAAGCTGTTTCACCGAAGAAGCCAACTTCACTGCCTGAAGTGGCAAAGCAGCGGGA
                      ____________________________________________________________
consensus             AGATGAAGCTGTTTCACCGAAGAAGCCAACTTCACTGCCTGAAGTGGCAAAGCAGCGGGA
 
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rJMSF020B10+          GCTAAGTGGAACACTAGAGAGTGAGGCAGATGCAAAGTTGAAGAAGCAACTTTCTGATGC
rJMFF025B07+          GCTAAGTGGAACACTAGAGAGTGAGGCAGATGCAAAGTTGAAGAAGCAACTTTCTGATGC
rJMFF020H18+          GCTAAGTGGAACACTAGAGAGTGAGGCAGATGCAAAGTTGAAGAAGCAACTTTCTGATGC
                      ____________________________________________________________
consensus             GCTAAGTGGAACACTAGAGAGTGAGGCAGATGCAAAGTTGAAGAAGCAACTTTCTGATGC
 
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rJMSF020B10+          AAAATGCAAAGAGCTTAGTGGGCATGACATCTTTGCCCCGCCACCTGAAATCAAGCCTCG
rJMFF025B07+          AAAATGCAAAGAGCTTAGTGGGCATGACATCTTTGCCCCGCCACCTGAAATCAAGCCTCG
rJMFF020H18+          AAAATGCAAAGAGCTTAGTGGGCATGACATCTTTGCCCCGCCACCTGAAATCAAGCCTCG
                      ____________________________________________________________
consensus             AAAATGCAAAGAGCTTAGTGGGCATGACATCTTTGCCCCGCCACCTGAAATCAAGCCTCG
 
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rJMSF020B10+          ACCATTAACTGCTCGGGCATTGGCATTAAGAGAAAGCATTACCATTGGAGAGCCTGCTCC
rJMFF025B07+          ACCATTAACTGCTCGGGCATTGGCATTAAGAGAAAGCATTACCATTGGAGAGCCTGCTCC
rJMFF020H18+          ACCATTAACTGCTCGGGCATTGGCATTAAGAGAAAGCATTACCATTGGAGAGCCTGCTCC
                      ____________________________________________________________
consensus             ACCATTAACTGCTCGGGCATTGGCATTAAGAGAAAGCATTACCATTGGAGAGCCTGCTCC
 
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rJMSF020B10+          CAATCACGATCCTGAAGCCAGTGAAGAAGTTGTCAAGACAGCAAAGAAAATTCCCAACCA
rJMFF025B07+          CAATCACGATCCTGAAGCCAGTGAAGAAGTTGTCAAGACAGCAAAGAAAATTCCCAACCA
rJMFF020H18+          CAATCACGATCCTGAAGCCAGTGAAGAAGTTGTCAAGACAGCAAAGAAAATTCCCAACCA
                      ____________________________________________________________
consensus             CAATCACGATCCTGAAGCCAGTGAAGAAGTTGTCAAGACAGCAAAGAAAATTCCCAACCA
 
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rJMSF020B10+          GAAGCTT-CAGAGCTGTCAGGAAATGACATTTTCAAGGGAGATACTCCCCCAGCACTGGC
rJMFF025B07+          GAAGCTTGCAGAGCTGTCAGGAAATGACATTTTCAAGGGAGATACTCCCCCAGCACTGGC
rJMFF020H18+          GAAGCTTGCAGAGCTGTCAGGAAATGACATTTTCAAGGGAGATACTCCCCCAGCACTGGC
rJMFF047L04+                  CAGAGCTGTCAGGAAATGACATTTTCAAGGGAGATACTCCCCCAGCACTGGC
                      ____________________________________________________________
consensus             GAAGCTTGCAGAGCTGTCAGGAAATGACATTTTCAAGGGAGATACTCCCCCAGCACTGGC
 
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rJMSF020B10+          AGAGAAGCACCTAAGCTCCGCAAAGCTGCGAGAAATGAGTGGTAGTAACATATTTGCAGA
rJMFF025B07+          AGAGAAGCACCTAAGCTCCGCAAAGCTGCGAGAAATGAGTGGTAGTAACATATTTGCAGA
rJMFF020H18+          AGAGAAGCACCTAAGCTCCGCAAAGCTGCGAGAAATGAGTGGTAGTAACATATTTGCAGA
rJMFF047L04+          AGAGAAGCACCTAAGCTCCGCAAAGCTGCGAGAAATGAGTGGTAGTAACATATTTGCAGA
                      ____________________________________________________________
consensus             AGAGAAGCACCTAAGCTCCGCAAAGCTGCGAGAAATGAGTGGTAGTAACATATTTGCAGA
 
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rJMSF020B10+          TGGAAAAGTAGAATCTCGGGACTTCTATGGTGGTGTCCGCAAGCCTCCTGGTGGTGAGAG
rJMFF025B07+          TGGAAAAGTAGAATCTCGGGACTTCTATGGTGGTGTCCGCAAGCCTCCTGGTGGTGAGAG
rJMFF020H18+          TGGAAAAGTAGAATCTCGGGACTTCTATGGTGGTGTCCGCAAGCCTCCTGGTGGTGAGAG
rJMFF049E01+                          CGGGACTTCTATGGTGGTGTCCGCAAGCCTCCTGGTGGTGAGAG
rJMFF047L04+          TGGAAAAGTAGAATCTCGGGACTTCTATGGTGGTGTCCGCAAGCCTCCTGGTGGTGAGAG
                      ____________________________________________________________
consensus             TGGAAAAGTAGAATCTCGGGACTTCTATGGTGGTGTCCGCAAGCCTCCTGGTGGTGAGAG
 
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rJMSF020B10+          CAGTATTGCGTTGGTGTAACTTGTTAGGTCTAACTCAAATCGGTTCATATCATCTTTCAC
rJMFF025B07+          CAGTATTGCGTTGGTGTAACTTGTTAGGTCTAACTCAAATCGGTTCATATCATCTTTCAC
rJMFF020H18+          CAGTATTGCGTTGGTGTAACTTGTTAGGTCTAACTCAAATCGGTTCATATCATCTTTCAC
rJMFF049E01+          CAGTATTGCGTTGGTGTAACTTGTTAGGTCTAACTCAAATCGGTTCATATCATCTTTCAC
rJMFF047L04+          CAGTATTGCGTTGGTGTAACTTGTTAGGTCTAACTCAAATCGGTTCATATCATCTTTCAC
                      ____________________________________________________________
consensus             CAGTATTGCGTTGGTGTAACTTGTTAGGTCTAACTCAAATCGGTTCATATCATCTTTCAC
 
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rJMSF020B10+          CATTTGTGTTTCCTTCTCTTATTTGTAGCAGGGGTCGTTTTTCTTGTGATGTGACCATGT
rJMFF025B07+          CATTTGTGTTTCCTTCTCTTATTTGTAGCAGGGGTCGTTTTTCTTGTGATGTGACCATGT
rJMFF020H18+          CATTTGTGTTTCCTTCTCTTATTTGTAGCAGGGGTCGTTTTTCTTGTGATGTGACCATGT
rJMFF049E01+          CATTTGTGTTTCCTTCTCTTATTTGTAGCAGGGGTCGTTTTTCTTGTGATGTGACCATGT
rJMFF047L04+          CATTTGTGTTTCCTTCTCTTATTTGTAGCAGGGGTCGTTTTTCTTGTGATGTGACCATGT
                      ____________________________________________________________
consensus             CATTTGTGTTTCCTTCTCTTATTTGTAGCAGGGGTCGTTTTTCTTGTGATGTGACCATGT
 
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rJMSF020B10+          GTTTTTTACCGGGTTTGTTGTGTGTTAGGCTTCATTAACAAGTCAACCAGAGCTATGAAC
rJMFF025B07+          GTTTTTTACCGGGTTTGTTGTGTGTTAGGCTTCATTAACAAGTCAACCAGAGCTATGAAC
rJMFF020H18+          GTTTTTTACCGGGTTTGTTGTGTGTTAGGCTTCATTAACAAGTCAACCAGAGCTATGAAC
rJMFF049E01+          GTTTTTTACCGGGTTTGTTGTGTGTTAGGCTTCATTAACAAGTCAACCAGAGCTATGAAC
rJMFF047L04+          GTTTTTTACCGGGTTTGTTGTGTGTTAGGCTTCATTAACAAGTCAACCAGAGGTATGAAC
                      ____________________________________________________________
consensus             GTTTTTTACCGGGTTTGTTGTGTGTTAGGCTTCATTAACAAGTCAACCAGAGCTATGAAC
 
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rJMSF020B10+          CATTTAGCTAATTGGGTTGTATTGTTCATAAATCTATGTTTTGGTTGTCC          
rJMFF025B07+          CATTTAGCTAATTGGGTTGTATTGTTCATAAATC                          
rJMFF020H18+          CATTTAGCTAATTGGGTTGTATTGTTCATAAATCTATGTTTTGGTTGTCCGTGTGTATGA
rJMFF049E01+          CATTTAGCTAATTGGGTTGTATTGTTCATAAATCTATGTTTTGGTTGTCCGTGTGTATGA
rJMFF047L04+          CATTTAGCTAATTGGGTTGTATTGTTCATAAATCTATGTTTTGGTTGTCCGTGTGTATGA
                      ____________________________________________________________
consensus             CATTTAGCTAATTGGGTTGTATTGTTCATAAATCTATGTTTTGGTTGTCCGTGTGTATGA
 
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rJMFF020H18+          AGATGGCTGTGCACTGGATTTAATTTACACTCAAAATGC                     
rJMFF049E01+          AGATGGCTGTGCACTGGATTTAATTTACACTCAAAATGCTTCTTGGTTTTGATTTTTCTT
rJMFF047L04+          AGATGGCTGTGCACTGGATTTAATTTACACTCAAAATGCTTCTTGGTTTTGATTTTTCTT
                      ____________________________________________________________
consensus             AGATGGCTGTGCACTGGATTTAATTTACACTCAAAATGCTTCTTGGTTTTGATTTTTCTT