Contig 002708:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF047I07Sequence553008881 (3)sp|P48395.1|CHSA_IPONI2e-85RecName: Full=Chalcone synthase A; AltName: Full=Naringenin-chalcone synthase A422002708 (3)sp|P48398.1|CHSB_IPOPU9e-37RecName: Full=Chalcone synthase B; AltName: Full=Naringenin-chalcone synthase B
JMFF047I10Sequence449008881 (3)gb|AAB02620.1|9e-68chalcone synthase A [Ipomoea purpurea] gb|AAB62591.1| chalcone synthase-A [Ipomo446002708 (3)gb|AAB62589.1|3e-48chalcone synthase-A [Ipomoea purpurea]
JMSF009M09Sequence270008881 (3)sp|P48395.1|CHSA_IPONI6e-41RecName: Full=Chalcone synthase A; AltName: Full=Naringenin-chalcone synthase A704002708 (3)gb|AAB62589.1|5e-146chalcone synthase-A [Ipomoea purpurea]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF009M09+                                      GGCTAGCCAAAGATCTCGCCGAGAATAATAAA
                      ____________________________________________________________
consensus                                         GGCTAGCCAAAGATCTCGCCGAGAATAATAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF009M09+          GGTGGTCGCGTTCTGGTGGTGTGCTCGGAAGTTATGTTAAATGTATTTCGTGGGCCAAGT
                      ____________________________________________________________
consensus             GGTGGTCGCGTTCTGGTGGTGTGCTCGGAAGTTATGTTAAATGTATTTCGTGGGCCAAGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF009M09+          CTAGAACAAGAAGATAATCTTTTGGCGCAATGTTTATTCGGCGATGGCTCGGCCGCCGTG
                      ____________________________________________________________
consensus             CTAGAACAAGAAGATAATCTTTTGGCGCAATGTTTATTCGGCGATGGCTCGGCCGCCGTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF009M09+          ATTGTTGGGACAGAGCCGAGGCCCGGTCTTGAAACTCCATTGTTTGAGTTGGTCTCTGCC
                      ____________________________________________________________
consensus             ATTGTTGGGACAGAGCCGAGGCCCGGTCTTGAAACTCCATTGTTTGAGTTGGTCTCTGCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF009M09+          GCACAAACAACCATTCCCGACACTGATTCTCACCTTAAACTGCACTTGCGAGAGATGGGG
                      ____________________________________________________________
consensus             GCACAAACAACCATTCCCGACACTGATTCTCACCTTAAACTGCACTTGCGAGAGATGGGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF009M09+          CTTACATTCCATTGTAGCAAGGCTGTCCCTTCTCTCATTACCCAAAATGTGGAGGATTGT
                      ____________________________________________________________
consensus             CTTACATTCCATTGTAGCAAGGCTGTCCCTTCTCTCATTACCCAAAATGTGGAGGATTGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF009M09+          TTGGTGAAGGCGTTCGAGCCGTTTGGAATCTCGGATTGGAATTCAATTTTCTGGATTTTG
                      ____________________________________________________________
consensus             TTGGTGAAGGCGTTCGAGCCGTTTGGAATCTCGGATTGGAATTCAATTTTCTGGATTTTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF009M09+          CACCCTGGTGGCATTGCCATTCTGGATCGCGTGGAAGAGAAATTAGGGCTGGAGCCCGAG
rJMFF047I10+                   GGCAATGCCATTCTGGATGGCGTTGAAGAGAAATTAGGGCTCGATCCCGAG
rJMFF047I07+                                                                CCCGAG
                      ____________________________________________________________
consensus             CACCCTGGTGGCATTGCCATTCTGGATGGCGTTGAAGAGAAATTAGGGCTGGATCCCGAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF009M09+          AAGTTGCGAGCGTCAAAGGACGTTCTTTCGGAGTATGGGAATTTAACAAGCGCATGTGTG
rJMFF047I10+          AAGTTGCGAGCGTCAAGGGACGTTCTTTCCCAGTATGGGAATTTAACAAGCGCATGTGTG
rJMFF047I07+          AAGTTGCGAGCGTCAAAGGACGTTCTTTCGGAGTATGGGAATTTAACAAGCGCATGTGTG
                      ____________________________________________________________
consensus             AAGTTGCGAGCGTCAAAGGACGTTCTTTCGGAGTATGGGAATTTAACAAGCGCATGTGTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF009M09+          TTGTTCATATTAGATGAGATGAGAAAGAAATCCAAGAAAGATGAAGAGATGACTACTGGG
rJMFF047I10+          TTGTTCATATTAGATGAGGTGAGAAAGAAATCCAAGAAACAGCAGCAAATGACTACTGGG
rJMFF047I07+          TTGTTCATATTAGATGAGATGAGAAAGAAATCCAAGAAAGATGAAGAGATGACTACTGGG
                      ____________________________________________________________
consensus             TTGTTCATATTAGATGAGATGAGAAAGAAATCCAAGAAAGATGAAGAGATGACTACTGGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF009M09+          GAGGGATTGGAATGGGGCGTGGTTTTCGGGTTTGGACCTGGACTTACCATTGATACTGTT
rJMFF047I10+          GAGGGCTTGGGATGGGGCGTGCTTTTTGGCTTTGGACCTGGACTTACCATCGATACTGTT
rJMFF047I07+          GAGGGATTGGAATGGGGCGTGGTTTTCGGGTTTGGACCTGGACTTACCATTGATACTGTT
                      ____________________________________________________________
consensus             GAGGGATTGGAATGGGGCGTGGTTTTCGGGTTTGGACCTGGACTTACCATTGATACTGTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF009M09+          GTCATTCGTAGTGTGCCCACAAATTAGCT                               
rJMFF047I10+          GTCATTCGTAGTGTGCCCATAAATTAGCTGGC---TTAGTTCGGATCGGAGTAATTTTTA
rJMFF047I07+          GTCATTCGTAGTGTGCCCACAAATTAGCTAGCTAGTAATTAAGGATCGGAGTAATTT---
                      ____________________________________________________________
consensus             GTCATTCGTAGTGTGCCCACAAATTAGCTGGCTAGTTATTTCGGATCGGAGTAATTTTTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF047I10+          TTTTTAAACAATTCATGCATACAATTAAACATTATTAAGATTGTTGTTTAATTGTCATTA
rJMFF047I07+          ---TTAAACAATTCATGCATACAATAAAACATTATTAAGAGTGTTGTTTAATTGTCATTA
                      ____________________________________________________________
consensus             TTTTTAAACAATTCATGCATACAATTAAACATTATTAAGATTGTTGTTTAATTGTCATTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF047I10+          TATTAGAGGAAATCCAGCCTACT                                     
rJMFF047I07+          TATTAGAGGAAATCCGGCCTACTGTTTACCATGTATGTTCTATTGTTACTACATGCATGT
                      ____________________________________________________________
consensus             TATTAGAGGAAATCCGGCCTACTGTTTACCATGTATGTTCTATTGTTACTACATGCATGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF047I07+          TATCTACTATAAATATAAATTATGCTTTCTATCAATAAAAATTGTGAAATGTGAGAAAAG
                      ____________________________________________________________
consensus             TATCTACTATAAATATAAATTATGCTTTCTATCAATAAAAATTGTGAAATGTGAGAAAAG