Contig 002701:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF046O08Sequence549013570 (4)ref|XP_009767909.1|6e-68PREDICTED: uncharacterized protein LOC104218977 isoform X1 [Nicotiana sylvestri396002701 (5)ref|XP_009767910.1|3e-19PREDICTED: uncharacterized protein LOC104218977 isoform X2 [Nicotiana sylvestri
JMSF019N06Sequence532002701 (5)ref|XP_009767910.1|5e-92PREDICTED: uncharacterized protein LOC104218977 isoform X2 [Nicotiana sylvestri738002701 (5)ref|XP_009767910.1|4e-89PREDICTED: uncharacterized protein LOC104218977 isoform X2 [Nicotiana sylvestri
JMSF040B21Sequence577013570 (4)ref|XP_009767909.1|2e-69PREDICTED: uncharacterized protein LOC104218977 isoform X1 [Nicotiana sylvestri813002701 (5)ref|XP_009767910.1|5e-107PREDICTED: uncharacterized protein LOC104218977 isoform X2 [Nicotiana sylvestri
JMSF050K03Sequence702013570 (4)ref|XP_009767909.1|3e-86PREDICTED: uncharacterized protein LOC104218977 isoform X1 [Nicotiana sylvestri769002701 (5)ref|XP_009767910.1|2e-88PREDICTED: uncharacterized protein LOC104218977 isoform X2 [Nicotiana sylvestri

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF019N06- GGTGGCTTGTGCTACACAGATTCAGCTGGGGTTAATTTGCAGAATTTGAAAATGG
rJMSF040B21+ TAATTTGCAGAATTTGAAAATGG
                      ____________________________________________________________
consensus GGTGGCTTGTGCTACACAGATTCAGCTGGGGTTAATTTGCAGAATTTGAAAATGG
 
. : . : . : . : . : . :
JMSF019N06- AGGCATCTCATTTCAGGGATGAACTGTGGACAGGAATTCGTGATCTTAGTAAGAAAACTG
rJMSF040B21+ AGGCATCTCATTTCAGGGATGAACTGTGGACAGGAATTCGTGATCTTAGTAAGAAAACTG
rJMSF019N06+ AAAACTG
rJMSF050K03+ AAAACTG
                      ____________________________________________________________
consensus AGGCATCTCATTTCAGGGATGAACTGTGGACAGGAATTCGTGATCTTAGTAAGAAAACTG
 
. : . : . : . : . : . :
JMSF019N06- ATTTGATTGTTCTTGTTCATAACTTGTCTCACCGAATACCTAGATACAGTGAATCAACTG
rJMSF040B21+ ATTTGATTGTTCTTGTTCATAACTTGTCTCACCGAATACCTAGATACAGTGAATCAACTG
rJMSF019N06+ ATTTGATTGTTCTTGTTCATAACTTGTCTCACCGAATACCTAGATACAGTGAATCAACTG
rJMSF050K03+ ATTNGATTGTTCTTGTTCATAACTTGTCTCACCGAATACCTAGATACAGTGAATCAACTG
                      ____________________________________________________________
consensus ATTTGATTGTTCTTGTTCATAACTTGTCTCACCGAATACCTAGATACAGTGAATCAACTG
 
. : . : . : . : . : . :
JMSF019N06- CAACACAGCCGAAACCAGCTCTATCGCTTCTCTTGGACGAGGCTAAATCTCTTGGAATTC
rJMSF040B21+ CAACACAGCCGAAACCAGCTCTATCGCTTCTCTTGGACGAGGCTAAATCTCTTGGAATTC
rJMSF019N06+ CAACACAGCCGAAACCAGCTCTATCGCTTCTCTTGGACGAGGCTAAATCTCTTGGAATTC
rJMSF050K03+ CAACACAGCCGAAACCAGCTCTATCGCTTCTCTTGGACGAGGCTAAATCTCTTGGAATTC
                      ____________________________________________________________
consensus CAACACAGCCGAAACCAGCTCTATCGCTTCTCTTGGACGAGGCTAAATCTCTTGGAATTC
 
. : . : . : . : . : . :
JMSF019N06- CTTGGGTGCTTGCTATTACAAACAAATTTTCTGTTAGCGCACATCAGCAAAAGGCAGCTA
rJMSF040B21+ CTTGGGTGCTTGCTATTACAAACAAATTTTCTGTTAGCGCACATCAGCAAAAGGCAGCTA
rJMSF019N06+ CTTGGGTGCTTGCTATTACAAACAAATTTTCTGTTAGCGCACATCAGCAAAAGGCAGCTA
rJMSF050K03+ CTTGGGTGCTTGCTATTACAAACAAATTTTCTGTTAGCGCACATCAGCAAAAGGCAGCTA
                      ____________________________________________________________
consensus CTTGGGTGCTTGCTATTACAAACAAATTTTCTGTTAGCGCACATCAGCAAAAGGCAGCTA
 
. : . : . : . : . : . :
JMSF019N06- TAGATTCTGTTCTTCATGCATATCAAGCGTCTCCTAGCACAACCGAGGTTATCAATTCGT
rJMSF040B21+ TAGATTCTGTTCTTCATGCATATCAAGCGTCTCCTAGCACAACCGAGGTTATCAATTCGT
rJMSF019N06+ TAGATTCTGTTCTTCATGCATATCAAGCGTCTCCTAGCACAACCGAGGTTATCAATTCGT
rJMSF050K03+ TAGATTCTGTTCTTCATGCATATCAAGCGTCTCCTAGCACAACCGAGGTTATCAATTCGT
                      ____________________________________________________________
consensus TAGATTCTGTTCTTCATGCATATCAAGCGTCTCCTAGCACAACCGAGGTTATCAATTCGT
 
. : . : . : . : . : . :
JMSF019N06- GTCCCTATGTTCTGCCCAGTGCATCAGGCGCTCCTCTATCTTGGAAAACAGAGGGGGTAG
rJMSF040B21+ GTCCCTATGTTCTGCCCAGTGCATCAGGCGCTCCTCTATCTTGGAAAACAGAGGGGGTAG
rJMSF019N06+ GTCCCTATGTTCTGCCCAGTGCATCAGGCGCTCCTCTATCTTGGAAAACAGAGGGGGTAG
rJMSF050K03+ GTCCCTATGTTCTGCCCAGTGCATCAGGCGCTCCTCTATCTTGGAAAACAGAGGGGGTAG
                      ____________________________________________________________
consensus GTCCCTATGTTCTGCCCAGTGCATCAGGCGCTCCTCTATCTTGGAAAACAGAGGGGGTAG
 
. : . : . : . : . : . :
JMSF019N06- GTCCGAAAGAAATAATAGGTGCTCATAAGCTGATCTTCGCTCCACTTGAACTCGTAACAA
rJMSF040B21+ GTCCGAAAGAAATAATAGGTGCTCATAAGCTGATCTTCGCTCCACTTGAACTCGTAACAA
rJMSF019N06+ GTCCGAAAGAAATAATAGGTGCTCATAAGCTGATCTTCGCTCCACTTGAACTCGTAACAA
rJMSF050K03+ GTCCGAAAGAAATAATAGGTGCTCATAAGCTGATCTTCGCTCCACTTGAACTCGTAACAA
                      ____________________________________________________________
consensus GTCCGAAAGAAATAATAGGTGCTCATAAGCTGATCTTCGCTCCACTTGAACTCGTAACAA
 
. : . : . : . : . : . :
JMSF019N06- GACCTTTTCGTAAGAAAGCTTCTGTTTTCCCAGTAGAGGGTGTATCTACTCTTCGTG
rJMSF040B21+ GACCTTTTCGTAAGAAAGCTTCTGTTTTCCCAGTAGAGGGTGTATCTACTCTTCGTGAAG
rJMSF019N06+ GACCTTTTCGTAAGAAAGCTTCTGTTTTCCCAGTAGAGGGTGTATCTACTCTTCGTGAAG
rJMSF050K03+ GACCTTTTCGTAAGAAAGCTTCTGTTTTCCCAGTAGAGGGTGTATCTACTCTTCGTGAAG
                      ____________________________________________________________
consensus GACCTTTTCGTAAGAAAGCTTCTGTTTTCCCAGTAGAGGGTGTATCTACTCTTCGTGAAG
 
. : . : . : . : . : . :
rJMSF040B21+ TTATACACCGTGTGCTCCGTAGCTATGAGGAAGCCGCCTTGCAGGAGTTTGCGAAAGACA
rJMSF019N06+ TTATACACCGTGTGCTCCGTAGCTATGAGGAAGCCGCCTTGCAGGAGTTTGCGAAAGACA
rJMSF050K03+ TTATACACCGTGTGCTCCGTAGCTATGAGGAAGCCGCCTTGCAGGAGTTTGCGAAAGACA
rJMFF046O08+ ATGAGGAAGCCGCCTTGCAGGAGTTTGCGAAAGACA
                      ____________________________________________________________
consensus TTATACACCGTGTGCTCCGTAGCTATGAGGAAGCCGCCTTGCAGGAGTTTGCGAAAGACA
 
. : . : . : . : . : . :
rJMSF040B21+ GACTATTCTTAGAACTGGTAAAGGAGCATGCAGTCGCTGCAAATGCAAGTAGAGAGGCAA
rJMSF019N06+ GACTATTCTTAGAACTGGTAAAGGAGCATGCAGTCGCTGCAAATGCAAGTAGAGAGGCAA
rJMSF050K03+ GACTATTCTTAGAACTGGTAAAGGAGCATGCAGTCGCTGCAAATGCAAGTAGAGAGGCAA
rJMFF046O08+ GACTATTTTTAGAACTGGTAAAGGAGCATGCAGTCGCTGCAAATGCAAGTAGAGAGGCAA
                      ____________________________________________________________
consensus GACTATTCTTAGAACTGGTAAAGGAGCATGCAGTCGCTGCAAATGCAAGTAGAGAGGCAA
 
. : . : . : . : . : . :
rJMSF040B21+ AGGCCAAGGAAAACGCTCTTTCTTCCGCCACTGTTGGAGCATCCCTTGGCGCCGGTCTTG
rJMSF019N06+ AGGCCAAGGAAAACGCTCTTTCTTCCGCCACTGTTGGAGCATCCCTTGGCGCCGGTCTTG
rJMSF050K03+ AGGCCAAGGAAAACGCTCTTTCTTCCGCCACTGTTGGAGCATCCCTTGGCGCCGGTCTTG
rJMFF046O08+ AGGCCAAGGAAAACGCTTTTTTTTCCGCCACTGTTGGAGCATCCCTTGGCGCCGGTTTTG
                      ____________________________________________________________
consensus AGGCCAAGGAAAACGCTCTTTCTTCCGCCACTGTTGGAGCATCCCTTGGCGCCGGTCTTG
 
. : . : . : . : . : . :
rJMSF040B21+ GCCTTGTGTTGGCAGTAGTAATGGGTGCAGGATCTGCTTGGAGAAAGCCTTGAAAATTTT
rJMSF019N06+ GCCTTGTGTTGGCAGTAGTAATGGGTGCAGGATCTGCTTGGAGAAAGCCTTGAAAATTTT
rJMSF050K03+ GCCTTGTGTTGGCAGTAGTAATGGGTGCAGGATCTGCTTGGAGAAAGCCTTGAAAATTTT
rJMFF046O08+ GCCTTGTGTTGGCAGTAGTAATGGGTGCAGGATTTGCTTGGAGAAAGCCTTGAAAATTTT
                      ____________________________________________________________
consensus GCCTTGTGTTGGCAGTAGTAATGGGTGCAGGATCTGCTTGGAGAAAGCCTTGAAAATTTT
 
. : . : . : . : . : . :
rJMSF040B21+ GACATGTTTTTAGGCCCGCATTGAAATGGTTAGGTTTTGCATTCAAATGTGAATACAC
rJMSF019N06+ GACATGTTTTTAGGCCCGCATTGAAATGGTTAGGTTTTGCATTCAAATGTGAATACAC
rJMSF050K03+ GACATGTTTTTAGGCCCGCATTGAAATGGTTAGGTTTTGCATTCAAATGTGAATACACAT
rJMFF046O08+ GACATGTTTTTAGGCCCGCATTGAAATGGTTAGGTTTTGCATTCAAATGTGAATACACAT
                      ____________________________________________________________
consensus GACATGTTTTTAGGCCCGCATTGAAATGGTTAGGTTTTGCATTCAAATGTGAATACACAT
 
. : . : . : . : . : . :
rJMSF050K03+ GTACAATAGTGTTCTGATTAGGCGAGAAAAATGG
rJMFF046O08+ GTACAATAGTGTTTTGATTAGGCGAGAAAAATGGTATAAACTATTTATTTTTTTACCCAG
                      ____________________________________________________________
consensus GTACAATAGTGTTTTGATTAGGCGAGAAAAATGGTATAAACTATTTATTTTTTTACCCAG
 
. : . : . : . : . : . :
rJMFF046O08+ TAATTGTTTTGACTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAAAAAAAAAAAAAAAA
                      ____________________________________________________________
consensus TAATTGTTTTGACTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAAAAAAAAAAAAAAA