Contig 002701:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF046O08Sequence549013570 (4)ref|XP_009767909.1|6e-68PREDICTED: uncharacterized protein LOC104218977 isoform X1 [Nicotiana sylvestri396002701 (5)ref|XP_009767910.1|3e-19PREDICTED: uncharacterized protein LOC104218977 isoform X2 [Nicotiana sylvestri
JMSF019N06Sequence532002701 (5)ref|XP_009767910.1|5e-92PREDICTED: uncharacterized protein LOC104218977 isoform X2 [Nicotiana sylvestri738002701 (5)ref|XP_009767910.1|4e-89PREDICTED: uncharacterized protein LOC104218977 isoform X2 [Nicotiana sylvestri
JMSF040B21Sequence577013570 (4)ref|XP_009767909.1|2e-69PREDICTED: uncharacterized protein LOC104218977 isoform X1 [Nicotiana sylvestri813002701 (5)ref|XP_009767910.1|5e-107PREDICTED: uncharacterized protein LOC104218977 isoform X2 [Nicotiana sylvestri
JMSF050K03Sequence702013570 (4)ref|XP_009767909.1|3e-86PREDICTED: uncharacterized protein LOC104218977 isoform X1 [Nicotiana sylvestri769002701 (5)ref|XP_009767910.1|2e-88PREDICTED: uncharacterized protein LOC104218977 isoform X2 [Nicotiana sylvestri

Alignment

This contig is upended


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JMSF019N06-                GGTGGCTTGTGCTACACAGATTCAGCTGGGGTTAATTTGCAGAATTTGAAAATGG
rJMSF040B21+                                               TAATTTGCAGAATTTGAAAATGG
                      ____________________________________________________________
consensus                  GGTGGCTTGTGCTACACAGATTCAGCTGGGGTTAATTTGCAGAATTTGAAAATGG
 
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JMSF019N06-           AGGCATCTCATTTCAGGGATGAACTGTGGACAGGAATTCGTGATCTTAGTAAGAAAACTG
rJMSF040B21+          AGGCATCTCATTTCAGGGATGAACTGTGGACAGGAATTCGTGATCTTAGTAAGAAAACTG
rJMSF019N06+                                                               AAAACTG
rJMSF050K03+                                                               AAAACTG
                      ____________________________________________________________
consensus             AGGCATCTCATTTCAGGGATGAACTGTGGACAGGAATTCGTGATCTTAGTAAGAAAACTG
 
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JMSF019N06-           ATTTGATTGTTCTTGTTCATAACTTGTCTCACCGAATACCTAGATACAGTGAATCAACTG
rJMSF040B21+          ATTTGATTGTTCTTGTTCATAACTTGTCTCACCGAATACCTAGATACAGTGAATCAACTG
rJMSF019N06+          ATTTGATTGTTCTTGTTCATAACTTGTCTCACCGAATACCTAGATACAGTGAATCAACTG
rJMSF050K03+          ATTNGATTGTTCTTGTTCATAACTTGTCTCACCGAATACCTAGATACAGTGAATCAACTG
                      ____________________________________________________________
consensus             ATTTGATTGTTCTTGTTCATAACTTGTCTCACCGAATACCTAGATACAGTGAATCAACTG
 
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JMSF019N06-           CAACACAGCCGAAACCAGCTCTATCGCTTCTCTTGGACGAGGCTAAATCTCTTGGAATTC
rJMSF040B21+          CAACACAGCCGAAACCAGCTCTATCGCTTCTCTTGGACGAGGCTAAATCTCTTGGAATTC
rJMSF019N06+          CAACACAGCCGAAACCAGCTCTATCGCTTCTCTTGGACGAGGCTAAATCTCTTGGAATTC
rJMSF050K03+          CAACACAGCCGAAACCAGCTCTATCGCTTCTCTTGGACGAGGCTAAATCTCTTGGAATTC
                      ____________________________________________________________
consensus             CAACACAGCCGAAACCAGCTCTATCGCTTCTCTTGGACGAGGCTAAATCTCTTGGAATTC
 
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JMSF019N06-           CTTGGGTGCTTGCTATTACAAACAAATTTTCTGTTAGCGCACATCAGCAAAAGGCAGCTA
rJMSF040B21+          CTTGGGTGCTTGCTATTACAAACAAATTTTCTGTTAGCGCACATCAGCAAAAGGCAGCTA
rJMSF019N06+          CTTGGGTGCTTGCTATTACAAACAAATTTTCTGTTAGCGCACATCAGCAAAAGGCAGCTA
rJMSF050K03+          CTTGGGTGCTTGCTATTACAAACAAATTTTCTGTTAGCGCACATCAGCAAAAGGCAGCTA
                      ____________________________________________________________
consensus             CTTGGGTGCTTGCTATTACAAACAAATTTTCTGTTAGCGCACATCAGCAAAAGGCAGCTA
 
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JMSF019N06-           TAGATTCTGTTCTTCATGCATATCAAGCGTCTCCTAGCACAACCGAGGTTATCAATTCGT
rJMSF040B21+          TAGATTCTGTTCTTCATGCATATCAAGCGTCTCCTAGCACAACCGAGGTTATCAATTCGT
rJMSF019N06+          TAGATTCTGTTCTTCATGCATATCAAGCGTCTCCTAGCACAACCGAGGTTATCAATTCGT
rJMSF050K03+          TAGATTCTGTTCTTCATGCATATCAAGCGTCTCCTAGCACAACCGAGGTTATCAATTCGT
                      ____________________________________________________________
consensus             TAGATTCTGTTCTTCATGCATATCAAGCGTCTCCTAGCACAACCGAGGTTATCAATTCGT
 
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JMSF019N06-           GTCCCTATGTTCTGCCCAGTGCATCAGGCGCTCCTCTATCTTGGAAAACAGAGGGGGTAG
rJMSF040B21+          GTCCCTATGTTCTGCCCAGTGCATCAGGCGCTCCTCTATCTTGGAAAACAGAGGGGGTAG
rJMSF019N06+          GTCCCTATGTTCTGCCCAGTGCATCAGGCGCTCCTCTATCTTGGAAAACAGAGGGGGTAG
rJMSF050K03+          GTCCCTATGTTCTGCCCAGTGCATCAGGCGCTCCTCTATCTTGGAAAACAGAGGGGGTAG
                      ____________________________________________________________
consensus             GTCCCTATGTTCTGCCCAGTGCATCAGGCGCTCCTCTATCTTGGAAAACAGAGGGGGTAG
 
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JMSF019N06-           GTCCGAAAGAAATAATAGGTGCTCATAAGCTGATCTTCGCTCCACTTGAACTCGTAACAA
rJMSF040B21+          GTCCGAAAGAAATAATAGGTGCTCATAAGCTGATCTTCGCTCCACTTGAACTCGTAACAA
rJMSF019N06+          GTCCGAAAGAAATAATAGGTGCTCATAAGCTGATCTTCGCTCCACTTGAACTCGTAACAA
rJMSF050K03+          GTCCGAAAGAAATAATAGGTGCTCATAAGCTGATCTTCGCTCCACTTGAACTCGTAACAA
                      ____________________________________________________________
consensus             GTCCGAAAGAAATAATAGGTGCTCATAAGCTGATCTTCGCTCCACTTGAACTCGTAACAA
 
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JMSF019N06-           GACCTTTTCGTAAGAAAGCTTCTGTTTTCCCAGTAGAGGGTGTATCTACTCTTCGTG   
rJMSF040B21+          GACCTTTTCGTAAGAAAGCTTCTGTTTTCCCAGTAGAGGGTGTATCTACTCTTCGTGAAG
rJMSF019N06+          GACCTTTTCGTAAGAAAGCTTCTGTTTTCCCAGTAGAGGGTGTATCTACTCTTCGTGAAG
rJMSF050K03+          GACCTTTTCGTAAGAAAGCTTCTGTTTTCCCAGTAGAGGGTGTATCTACTCTTCGTGAAG
                      ____________________________________________________________
consensus             GACCTTTTCGTAAGAAAGCTTCTGTTTTCCCAGTAGAGGGTGTATCTACTCTTCGTGAAG
 
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rJMSF040B21+          TTATACACCGTGTGCTCCGTAGCTATGAGGAAGCCGCCTTGCAGGAGTTTGCGAAAGACA
rJMSF019N06+          TTATACACCGTGTGCTCCGTAGCTATGAGGAAGCCGCCTTGCAGGAGTTTGCGAAAGACA
rJMSF050K03+          TTATACACCGTGTGCTCCGTAGCTATGAGGAAGCCGCCTTGCAGGAGTTTGCGAAAGACA
rJMFF046O08+                                  ATGAGGAAGCCGCCTTGCAGGAGTTTGCGAAAGACA
                      ____________________________________________________________
consensus             TTATACACCGTGTGCTCCGTAGCTATGAGGAAGCCGCCTTGCAGGAGTTTGCGAAAGACA
 
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rJMSF040B21+          GACTATTCTTAGAACTGGTAAAGGAGCATGCAGTCGCTGCAAATGCAAGTAGAGAGGCAA
rJMSF019N06+          GACTATTCTTAGAACTGGTAAAGGAGCATGCAGTCGCTGCAAATGCAAGTAGAGAGGCAA
rJMSF050K03+          GACTATTCTTAGAACTGGTAAAGGAGCATGCAGTCGCTGCAAATGCAAGTAGAGAGGCAA
rJMFF046O08+          GACTATTTTTAGAACTGGTAAAGGAGCATGCAGTCGCTGCAAATGCAAGTAGAGAGGCAA
                      ____________________________________________________________
consensus             GACTATTCTTAGAACTGGTAAAGGAGCATGCAGTCGCTGCAAATGCAAGTAGAGAGGCAA
 
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rJMSF040B21+          AGGCCAAGGAAAACGCTCTTTCTTCCGCCACTGTTGGAGCATCCCTTGGCGCCGGTCTTG
rJMSF019N06+          AGGCCAAGGAAAACGCTCTTTCTTCCGCCACTGTTGGAGCATCCCTTGGCGCCGGTCTTG
rJMSF050K03+          AGGCCAAGGAAAACGCTCTTTCTTCCGCCACTGTTGGAGCATCCCTTGGCGCCGGTCTTG
rJMFF046O08+          AGGCCAAGGAAAACGCTTTTTTTTCCGCCACTGTTGGAGCATCCCTTGGCGCCGGTTTTG
                      ____________________________________________________________
consensus             AGGCCAAGGAAAACGCTCTTTCTTCCGCCACTGTTGGAGCATCCCTTGGCGCCGGTCTTG
 
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rJMSF040B21+          GCCTTGTGTTGGCAGTAGTAATGGGTGCAGGATCTGCTTGGAGAAAGCCTTGAAAATTTT
rJMSF019N06+          GCCTTGTGTTGGCAGTAGTAATGGGTGCAGGATCTGCTTGGAGAAAGCCTTGAAAATTTT
rJMSF050K03+          GCCTTGTGTTGGCAGTAGTAATGGGTGCAGGATCTGCTTGGAGAAAGCCTTGAAAATTTT
rJMFF046O08+          GCCTTGTGTTGGCAGTAGTAATGGGTGCAGGATTTGCTTGGAGAAAGCCTTGAAAATTTT
                      ____________________________________________________________
consensus             GCCTTGTGTTGGCAGTAGTAATGGGTGCAGGATCTGCTTGGAGAAAGCCTTGAAAATTTT
 
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rJMSF040B21+          GACATGTTTTTAGGCCCGCATTGAAATGGTTAGGTTTTGCATTCAAATGTGAATACAC  
rJMSF019N06+          GACATGTTTTTAGGCCCGCATTGAAATGGTTAGGTTTTGCATTCAAATGTGAATACAC  
rJMSF050K03+          GACATGTTTTTAGGCCCGCATTGAAATGGTTAGGTTTTGCATTCAAATGTGAATACACAT
rJMFF046O08+          GACATGTTTTTAGGCCCGCATTGAAATGGTTAGGTTTTGCATTCAAATGTGAATACACAT
                      ____________________________________________________________
consensus             GACATGTTTTTAGGCCCGCATTGAAATGGTTAGGTTTTGCATTCAAATGTGAATACACAT
 
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rJMSF050K03+          GTACAATAGTGTTCTGATTAGGCGAGAAAAATGG                          
rJMFF046O08+          GTACAATAGTGTTTTGATTAGGCGAGAAAAATGGTATAAACTATTTATTTTTTTACCCAG
                      ____________________________________________________________
consensus             GTACAATAGTGTTTTGATTAGGCGAGAAAAATGGTATAAACTATTTATTTTTTTACCCAG
 
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rJMFF046O08+          TAATTGTTTTGACTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAAAAAAAAAAAAAAAA
                      ____________________________________________________________
consensus             TAATTGTTTTGACTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAAAAAAAAAAAAAAA