| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF016M10 | Sequence | 596 | 009333 (7) | 779 | 002698 (5) | ref|XP_004241498.1| | 6e-81 | PREDICTED: probable boron transporter 2 [Solanum lycopersicum] | |||
| JMFF046H16 | Sequence | 463 | 011758 (8) | ref|XP_008351827.1| | 2e-47 | PREDICTED: probable boron transporter 2 [Malus domestica] | 422 | 002698 (5) | ref|XP_004241498.1| | 5e-15 | PREDICTED: probable boron transporter 2 [Solanum lycopersicum] |
| JMFF046H24 | Sequence | 465 | 011758 (8) | ref|XP_008351827.1| | 4e-48 | PREDICTED: probable boron transporter 2 [Malus domestica] | 421 | 002698 (5) | ref|XP_004241498.1| | 9e-16 | PREDICTED: probable boron transporter 2 [Solanum lycopersicum] |
| JMSF016M17 | Sequence | 709 | 002698 (5) | ref|XP_004241498.1| | 2e-80 | PREDICTED: probable boron transporter 2 [Solanum lycopersicum] | |||||
| JMSF024E11 | Sequence | 708 | 009333 (7) | 783 | 002698 (5) | ref|XP_004241498.1| | 2e-95 | PREDICTED: probable boron transporter 2 [Solanum lycopersicum] | |||
This contig is upended
. : . : . : . : . : . :
rJMSF024E11+ AAAGCTTGCCCGGGAA
____________________________________________________________
consensus AAAGCTTGCCCGGGAA
. : . : . : . : . : . :
rJMSF024E11+ TCAGTTTTGGGAGAGGATATTATTGCNTTTTACAGCCCCAAGTCGAAGATACAAGGTCCT
rJMSF016M17+ ATACAAGGTCCT
rJMFF016M10+ ATACAAGGTCCT
____________________________________________________________
consensus TCAGTTTTGGGAGAGGATATTATTGCNTTTTACAGCCCCAAGTCGAAGATACAAGGTCCT
. : . : . : . : . : . :
rJMSF024E11+ GGAGGATAATCATGCAGTATTTGTGGAGACAGTACCTTTCAAAACAATTGCGGGCTTCAC
rJMSF016M17+ GGAGGATAATCATGCAGTATTTGTGGAGACAGTACCTTTCAAAACAATTGCGGGCTTCAC
rJMFF016M10+ GGAGGATAATCATGCAGTATTTGTGGAGACAGTACCTTTCAAAACAATTGCGGGCTTCAC
____________________________________________________________
consensus GGAGGATAATCATGCAGTATTTGTGGAGACAGTACCTTTCAAAACAATTGCGGGCTTCAC
. : . : . : . : . : . :
rJMSF024E11+ CTTGTTTCAGACGGTTTATCTGCTTCTATGCTTTGGAATAACATGGATTCCAATTGCGGG
rJMSF016M17+ CTTGTTTCAGACGGTTTATCTGCTTCTATGCTTTGGAATAACATGGATTCCAATTGCGGG
rJMFF016M10+ CTTGTTTCAGACGGTTTATCTGCTTCTATGCTTTGGAATAACATGGATTCCAATTGCGGG
____________________________________________________________
consensus CTTGTTTCAGACGGTTTATCTGCTTCTATGCTTTGGAATAACATGGATTCCAATTGCGGG
. : . : . : . : . : . :
rJMSF024E11+ TGTCCTTTTCCCGTTATTGATCATGCTTCTCGTCCCAGTGCGCCAGTACTTCCTTCCTAG
rJMSF016M17+ TGTCCTTTTCCCGTTATTGATCATGCTTCTCGTCCCAGTGCGCCAGTACTTCCTTCCTAG
rJMFF016M10+ TGTCCTTTTCCCGTTATTGATCATGCTTCTCGTCCCAGTGCGCCAGTACTTCCTTCCTAG
____________________________________________________________
consensus TGTCCTTTTCCCGTTATTGATCATGCTTCTCGTCCCAGTGCGCCAGTACTTCCTTCCTAG
. : . : . : . : . : . :
rJMSF024E11+ GTTCTTCAAAGGAGCCCATCTACACGATCTCGATGCTGCTGAATATGAAGAAGCCCCTCC
rJMSF016M17+ GTTCTTCAAAGGAGCCCATCTACACGATCTCGATGCTGCTGAATATGAAGAAGCCCCTCC
rJMFF016M10+ GTTCTTCAAAGGAGCCCATCTACACGATCTCGATGCTGCTGAATATGAAGAAGCCCCTCC
____________________________________________________________
consensus GTTCTTCAAAGGAGCCCATCTACACGATCTCGATGCTGCTGAATATGAAGAAGCCCCTCC
. : . : . : . : . : . :
rJMSF024E11+ AATTACCTACAATATGTCCTTGGATGATCAAGATGGTCAGAGGCCTATTGATAGCGGTGA
rJMSF016M17+ AATTACCTACAATATGTCCTTGGATGATCAAGATGGTCAGAGGCCTATTGATAGCGGTGA
rJMFF016M10+ AATTACCTACAATATGTCCTTGGATGATCAAGATGGTCAGAGGCCTATTGATAGCGGTGA
____________________________________________________________
consensus AATTACCTACAATATGTCCTTGGATGATCAAGATGGTCAGAGGCCTATTGATAGCGGTGA
. : . : . : . : . : . :
rJMSF024E11+ GTTGCTGGACCAGATGATCACGAGAAGCCATGGTGAGATCCGACATATATCCAGTCCGAA
rJMSF016M17+ GTTGCTGGACCAGATGATCACGAGAAGCCATGGTGAGATCCGACATATATCCAGTCCGAA
rJMFF016M10+ GTTGCTGGACCAGATGATCACGAGAAGCCATGGTGAGATCCGACATATATCCAGTCCGAA
rJMFF046H24+ CCGAA
rJMFF046H16+ GAA
____________________________________________________________
consensus GTTGCTGGACCAGATGATCACGAGAAGCCATGGTGAGATCCGACATATATCCAGTCCGAA
. : . : . : . : . : . :
rJMSF024E11+ GATAACCAGTTCAACCCCTACTTCAGTGGACGAAATAAAATCTGAGCACAGCCCGCATTT
rJMSF016M17+ GATAACCAGTTCAACCCCTACTTCAGTGGACGAAATAAAATCTGAGCACAGCCCGCATTT
rJMFF016M10+ GATAACCAGTTCAACCCCTACTTCAGTGGACGAAATAAAATCTGAGCACAGCCCGCATTT
rJMFF046H24+ GATAACCAGTTCAACCCCTACTTCAGTGGACGAAATAAAATCTGAGCACAGCCCGCATTT
rJMFF046H16+ GATAACCAGTTCAACCCCTACTTCAGTGGACGAAATAAAATCTGAGCACAGCCCGCATTT
____________________________________________________________
consensus GATAACCAGTTCAACCCCTACTTCAGTGGACGAAATAAAATCTGAGCACAGCCCGCATTT
. : . : . : . : . : . :
rJMSF024E11+ AACACACAGGGCATACAGCCCCAGAGTGAAAGGGCTGAGAGGCGAGAGGAGCCCGAGCCT
rJMSF016M17+ AACACACAGGGCATACAGCCCCAGAGTGAAAGGGCTGAGAGGCGAGAGGAGCCCGAGCCT
rJMFF016M10+ AACACACAGGGCATACAGCCCCAGAGTGAAAGGGCTGAGAGGCGAGAGGAGCCCGAGCCT
rJMFF046H24+ AACACACAGGGCATACAGCCCCAGAGTGAAAGGGCTGAGAGGCGAGAGGAGCCCGAGCCT
rJMFF046H16+ AACACACAGGGCATACAGCCCCAGAGTGAAAGGGCTGAGAGGCGAGAGGAGCCCGAGCCT
____________________________________________________________
consensus AACACACAGGGCATACAGCCCCAGAGTGAAAGGGCTGAGAGGCGAGAGGAGCCCGAGCCT
. : . : . : . : . : . :
rJMSF024E11+ CGAAACAAAGCGAACTCCCAGCCCCGGGCCATCTAAGCTCGGGGGTCGTAAGAGCAGCCA
rJMSF016M17+ CGAAACAAAGCGAACTCCCAGCCCCGGGCCATCTAAGCTCGGGGGTCGTAAGAGCAGCCA
rJMFF016M10+ CGAAACAAAGCGAACTCCCAGCCCCGGGCCATCTAAGCTCGGGGGTCGTAAGAGCAGCCA
rJMFF046H24+ CGAAACAAAGCGAACTCCCAGCCCCGGGCCATCTAAGCTCGGGGGTCGTAAGAGCAGCCA
rJMFF046H16+ CGAAACAAAGCGAACTCCCAGCCCCGGGCCATCTAAGCTCGGGGGTCGTAAGAGCAGCCA
____________________________________________________________
consensus CGAAACAAAGCGAACTCCCAGCCCCGGGCCATCTAAGCTCGGGGGTCGTAAGAGCAGCCA
. : . : . : . : . : . :
rJMSF024E11+ TGGTTCCCCTTCTACCTAGGTCAGCTGTTGTTGTGCTTGAGAGGTCAGTTAGAGTTGTTT
rJMSF016M17+ TGGTTCCCCTTCTACCTAGGTCAGCTGTTGNTGTGCTTGAGAGGTCAGTTAGAGNTGNNT
rJMFF016M10+ TGGTTCCCCTTCTACCTAGGTCAGCTGTTGTTGTGCTTGAGAGGTCAGTTAGAGTTGTTT
rJMFF046H24+ TGGTTCCCCTTCTACCTAGGTCAGCTGTTGTTGTGCTTGAGAGGTCAGTNAGAGTTGTTT
rJMFF046H16+ TGGTTCCCCTTCTACCTAGGTCAGCTGTTGTTGTGCTTGAGAGGTCAGTTAGAGTTGTTT
____________________________________________________________
consensus TGGTTCCCCTTCTACCTAGGTCAGCTGTTGTTGTGCTTGAGAGGTCAGTTAGAGTTGTTT
. : . : . : . : . : . :
rJMSF024E11+ ATGGTTCTTGAGAGGCCGTGTATGT-GTGTTTTATATATGTTTCTAACAGCTGTCAAATC
rJMSF016M17+ ATGGTTCTTGAGAGGCCGNGTANGTCGTGTTTTATATATGTTTCTAACAGCTGTCAAATC
rJMFF016M10+ ATGGTTCTTGAGAGGCCGTGTATGT-GTGTTTTATATATGTTTCTAACAGCTGTCAAATC
rJMFF046H24+ ATGGTTCTTGAGAGGCCGTGTATGT-GTGTTTTATATATGTTTCTAACAGCTGTCAAATC
rJMFF046H16+ ATGGTTCTTGAGAGGCCGTGTATGT-GTGTTTTATATATGTTTCTAACAGCTGTCAAATC
____________________________________________________________
consensus ATGGTTCTTGAGAGGCCGTGTATGT-GTGTTTTATATATGTTTCTAACAGCTGTCAAATC
. : . : . : . : . : . :
rJMSF024E11+ TTTAAGTGTTGTTTTTATGTGTTACTCCATTGTATATTGTTTCTGTT
rJMSF016M17+ TTTAAGTGTNGTTTNNATGTGTTNCTCCATTGTATAT
rJMFF016M10+ TTTAAGTGTTGTTTTTATGTGTTACTCCATTGTATATTGTTTCTGTTTGTATGGGCAGAA
rJMFF046H24+ TTTAAGTGTTGTTTTTATGTGTTACTCCATTGTATATTGTTTCTGTTTGTATGGGCAGAA
rJMFF046H16+ TTTAAGTGTTGTTTTTATGTGTTACTCCATTGTATATTGTTTCTGTTTGTATGGGCAGAA
____________________________________________________________
consensus TTTAAGTGTTGTTTTTATGTGTTACTCCATTGTATATTGTTTCTGTTTGTATGGGCAGAA
. : . : . : . : . : . :
rJMFF016M10+ GACAAATCATTTATCAGTCAGCTAAATGTTCAGAAA
rJMFF046H24+ GACAAATCATTTATCAGTCAGCTAAATGTTCAGAAAAAAAAAAAAAAAACTCTCCAG
rJMFF046H16+ GACAAATCATTTATCAGTCAGCTAAATGTTCAGAAAAAAAAAAAAAAAACTCTCCAGGGT
____________________________________________________________
consensus GACAAATCATTTATCAGTCAGCTAAATGTTCAGAAAAAAAAAAAAAAAACTCTCCAGGGT