| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF023H07 | Sequence | 395 | 010225 (5) | gb|ACJ05392.1| | 5e-29 | peroxisome biogenesis factor 14 [Nicotiana tabacum] | 611 | 002697 (4) | ref|XP_009800698.1| | 1e-34 | PREDICTED: peroxisomal membrane protein PEX14-like [Nicotiana sylvestris] |
| JMFF046E24 | Sequence | 551 | 010225 (5) | gb|ACJ05392.1| | 1e-39 | peroxisome biogenesis factor 14 [Nicotiana tabacum] | 512 | 002697 (4) | ref|XP_009627986.1| | 8e-13 | PREDICTED: peroxisomal membrane protein PEX14 isoform X2 [Nicotiana tomentosifo |
| JMSF004P24 | Sequence | 318 | 010225 (5) | gb|ACJ05392.1| | 8e-12 | peroxisome biogenesis factor 14 [Nicotiana tabacum] | 403 | 002697 (4) | ref|XP_009627986.1| | 6e-10 | PREDICTED: peroxisomal membrane protein PEX14 isoform X2 [Nicotiana tomentosifo |
| JMSF032J16 | Sequence | 676 | 010225 (5) | ref|XP_006347456.1| | 1e-59 | PREDICTED: peroxisomal membrane protein PEX14-like isoform X1 [Solanum tuberosu | 791 | 002697 (4) | ref|XP_009627985.1| | 2e-52 | PREDICTED: peroxisomal membrane protein PEX14 isoform X1 [Nicotiana tomentosifo |
This contig is upended
. : . : . : . : . : . :
rJMSF032J16+ GTTCACAGCCATCACAGCAATTNTATGCAAATGGCNAA
____________________________________________________________
consensus GTTCACAGCCATCACAGCAATTNTATGCAAATGGCNAA
. : . : . : . : . : . :
rJMSF032J16+ GTGGATACTGATGCACGCTCAGTAAGATCTTCATCGCCACCCACATCTGTGGAACCCCCT
____________________________________________________________
consensus GTGGATACTGATGCACGCTCAGTAAGATCTTCATCGCCACCCACATCTGTGGAACCCCCT
. : . : . : . : . : . :
rJMSF032J16+ CCACATCCAAAATCTTACATGGAGATAATGGAAATGGTTCAAAGAGGGGAGAGACCTCCC
____________________________________________________________
consensus CCACATCCAAAATCTTACATGGAGATAATGGAAATGGTTCAAAGAGGGGAGAGACCTCCC
. : . : . : . : . : . :
rJMSF032J16+ AACATGAGAGACATTAATGATCAACCACCGAATCCTAATCAACCCATACCTGAACCTCTA
rJMFF023H07+ TA
____________________________________________________________
consensus AACATGAGAGACATTAATGATCAACCACCGAATCCTAATCAACCCATACCTGAACCTCTA
. : . : . : . : . : . :
rJMSF032J16+ GTAGCACCAAAGCCTAAGCCTTGGGAAGTCGGTCAAACTCAGAACAGTTCAAGCAATTTC
rJMFF023H07+ GTAGCACCAAAGCCTAAGCCTTGGGAAGTCGGTCAAACTCAGAACAGTTCAAGCAATTTC
____________________________________________________________
consensus GTAGCACCAAAGCCTAAGCCTTGGGAAGTCGGTCAAACTCAGAACAGTTCAAGCAATTTC
. : . : . : . : . : . :
rJMSF032J16+ ATTCAATCTCAAGGCAGCGGTGATGCCTCGGGTTTCGGTTTCCAAGATAATAATCAGTTC
rJMFF023H07+ ATTCAATCTCAAGGCAGCGGTGATGCCTCGGGTTTCGGTTTCCAAGATAATAATCAGTTC
____________________________________________________________
consensus ATTCAATCTCAAGGCAGCGGTGATGCCTCGGGTTTCGGTTTCCAAGATAATAATCAGTTC
. : . : . : . : . : . :
rJMSF032J16+ AATGGAAGCAGTTCAACCCCTTGGTGGCAACGCAAAAATGCTAGAATTACAGAAATCGAA
rJMFF023H07+ AATGGAAGCAGTTCAACCCCTTGGTGGCAACGCAAAAATGCTAGAATTACAGAAATCGAA
rJMFF046E24+ GCAACGCAAAAATGCTAGAATTACAGAAATCGAA
____________________________________________________________
consensus AATGGAAGCAGTTCAACCCCTTGGTGGCAACGCAAAAATGCTAGAATTACAGAAATCGAA
. : . : . : . : . : . :
rJMSF032J16+ TCTGAAGATGAACAGAAGTTCGGGGGGCCTTCTGGTGTGCCAACCAACGAAAGACCTCCC
rJMFF023H07+ TCTGAAGATGAACAGAAGTTCGGGGGGCCTTCTGGTGTGCCAACCAACGAAAGACCTCCC
rJMSF004P24+ GCCAACCAACGAAAGACCTCCC
rJMFF046E24+ TCTGAAGATGAACAGAAGTTCGGGGGGCCTTCTGGTGTGCCAACCAACGAAAGACCTCCC
____________________________________________________________
consensus TCTGAAGATGAACAGAAGTTCGGGGGGCCTTCTGGTGTGCCAACCAACGAAAGACCTCCC
. : . : . : . : . : . :
rJMSF032J16+ CCACGGTCCTGGGTTCCTCCCCAGCCACCTCCAGTTGCAATGGCCGAAGCAGCAGCAGCG
rJMFF023H07+ CCACGGTCCTGGGTTCCTCCCCAGCCACCTCCAGTTGCAATGGCCGAAGCAGCAGCAGCG
rJMSF004P24+ CCACGGTCCTGGGTTCCTCCCCAGCCACCTCCAGTTGCAATGGCCGAAGCAGCAGCAGCG
rJMFF046E24+ CCACGGTCCTGGGTTCCTCCCCAGCCACCTCCAGTTGCAATGGCCGAAGCAGCAGCAGCG
____________________________________________________________
consensus CCACGGTCCTGGGTTCCTCCCCAGCCACCTCCAGTTGCAATGGCCGAAGCAGCAGCAGCG
. : . : . : . : . : . :
rJMSF032J16+ ATCCGACAACCTAAAAAGTCTTCGTTGCCGAAAGATCAGCTGACAGACGACCAGTTGCTG
rJMFF023H07+ ATCCGACAACCTA--AAGTCTTCGTTGCCGAAAGATCAGCTGACAGACGACCAGTTGCTG
rJMSF004P24+ ATCCGACAACCTAAAAAGTCTTCGTTGCCGAAAGATCAGCTGACAGACGACCAGTTGCTG
rJMFF046E24+ ATCCGACAACCTA--AAGTCTTCGTTGCCGAAAGATCAGCTGACAGACGACCAGTTGCTG
____________________________________________________________
consensus ATCCGACAACCTAAAAAGTCTTCGTTGCCGAAAGATCAGCTGACAGACGACCAGTTGCTG
. : . : . : . : . : . :
rJMSF032J16+ GGGCGCTCATCGGAAATTTCTGATGACTTAGAGAGGATTACGAAGATCTCTGAATCAGGT
rJMFF023H07+ GGGCGCTCATCGGAAATTTCTGATGACTTAGAGAGGATTACAAAGATCTCTGAATCAGGT
rJMSF004P24+ GGGCGCTCATCGGAAATTTCTGATGACCTAGAGAGGATTACAAAGATCTCTGAATCAGGT
rJMFF046E24+ GGGCGCTCATCGGAAATTTCTGATGACTTAGAGAGGATTACAAAGATCTCTGAATCAGGT
____________________________________________________________
consensus GGGCGCTCATCGGAAATTTCTGATGACTTAGAGAGGATTACAAAGATCTCTGAATCAGGT
. : . : . : . : . : . :
rJMSF032J16+ GGTTTTGGAGAAGCCAATGGTGTGACTCAGACACCATTAGCAAATGATGTGCCAGCTTTG
rJMFF023H07+ GGTTTTGGAGAAGCCAATGGTGTGACTCAGACACCATTAGCAAATGATGTGCCAGCTTTG
rJMSF004P24+ GGTTTTGGAGAAGCCAATGGTGTGACTCAGACACCATTAGCAAATGATGTGCCAGCTTTG
rJMFF046E24+ GGTTTTGGAGAAGCCAATGGTGTGACTCAGACACCATTAGCAAATGATGTGCCAGCTTTG
____________________________________________________________
consensus GGTTTTGGAGAAGCCAATGGTGTGACTCAGACACCATTAGCAAATGATGTGCCAGCTTTG
. : . : . : . : . : . :
rJMSF032J16+ GAATAAACTAAGAAATCATATATGTTTCATTTTACTTCTTCTTCCCCCTCCCCAGGAACT
rJMFF023H07+ GAATAAACTAAGAAATCATATATGTTTCATTTTACTTCTTCTTCCCCCTCCCCAGGAACT
rJMSF004P24+ GAATAAACTAAGAAATCATATATGTTTCATTTTACTTCTTCTTCCCCCTCCCCAGGAACT
rJMFF046E24+ GAATAAACTAAGAAATCATATATGTTTCATTTTACTTCTTCTTCCCCCTCCCCAGGAACT
____________________________________________________________
consensus GAATAAACTAAGAAATCATATATGTTTCATTTTACTTCTTCTTCCCCCTCCCCAGGAACT
. : . : . : . : . : . :
rJMSF032J16+ CAACCTCATCTTCTGCTTGTTCTGCAATTCATT
rJMFF023H07+ CAACCTCATCTTCTGCTTGTTCTGCAATTCATTATTATGGTCAATACTTGATATCATAGT
rJMSF004P24+ CAACCTCATCTTCTGCTTGTTCTGCAATTCATTATTATGGTCAATACTTGATATCATAGT
rJMFF046E24+ CAACCTCATCTTCTGCTTGTTCTGCAATTCATTATTATGGTCAATACTTGATATCATAGT
____________________________________________________________
consensus CAACCTCATCTTCTGCTTGTTCTGCAATTCATTATTATGGTCAATACTTGATATCATAGT
. : . : . : . : . : . :
rJMFF023H07+ GTAATAATT
rJMSF004P24+ GTAATAATT
rJMFF046E24+ GTAATAATTTCCAGGTCTTCTGCCTTTTGTGGATTATATAATACCATATCTCATTTCTGG
____________________________________________________________
consensus GTAATAATTTCCAGGTCTTCTGCCTTTTGTGGATTATATAATACCATATCTCATTTCTGG