| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF004F10 | Sequence | 510 | 011629 (27) | ref|XP_009627792.1| | 5e-67 | PREDICTED: calnexin homolog 1-like [Nicotiana tomentosiformis] | 746 | 002695 (21) | ref|XP_009796698.1| | 1e-46 | PREDICTED: calnexin homolog 1-like [Nicotiana sylvestris] |
| JMFF006P21 | Sequence | 491 | 011629 (27) | ref|XP_009627792.1| | 9e-52 | PREDICTED: calnexin homolog 1-like [Nicotiana tomentosiformis] | 722 | 002695 (21) | ref|XP_009792195.1| | 2e-37 | PREDICTED: calnexin homolog 1-like [Nicotiana sylvestris] |
| JMFF007F04 | Sequence | 600 | 011629 (27) | ref|XP_009627792.1| | 5e-90 | PREDICTED: calnexin homolog 1-like [Nicotiana tomentosiformis] | 744 | 002695 (21) | ref|XP_009796698.1| | 2e-48 | PREDICTED: calnexin homolog 1-like [Nicotiana sylvestris] |
| JMFF012G23 | Sequence | 497 | 011629 (27) | ref|XP_009627792.1| | 1e-64 | PREDICTED: calnexin homolog 1-like [Nicotiana tomentosiformis] | 720 | 002695 (21) | ref|XP_006366280.1| | 3e-34 | PREDICTED: calnexin homolog [Solanum tuberosum] |
| JMFF014N16 | Sequence | 601 | 011629 (27) | gb|KCW87020.1| | 3e-57 | hypothetical protein EUGRSUZ_B03570 [Eucalyptus grandis] | 742 | 002695 (21) | ref|XP_009796698.1| | 1e-46 | PREDICTED: calnexin homolog 1-like [Nicotiana sylvestris] |
| JMFF015D14 | Sequence | 602 | 011629 (27) | emb|CDO98285.1| | 5e-64 | unnamed protein product [Coffea canephora] | 319 | 002695 (21) | |||
| JMFF015G12 | Sequence | 555 | 011629 (27) | gb|KJB38820.1| | 5e-105 | hypothetical protein B456_006G273500 [Gossypium raimondii] | 639 | 002695 (21) | ref|XP_006366280.1| | 1e-14 | PREDICTED: calnexin homolog [Solanum tuberosum] |
| JMFF016D22 | Sequence | 572 | 011629 (27) | emb|CDO98285.1| | 7e-58 | unnamed protein product [Coffea canephora] | 662 | 002695 (21) | ref|XP_006366280.1| | 2e-33 | PREDICTED: calnexin homolog [Solanum tuberosum] |
| JMFF024O24 | Sequence | 475 | 011629 (27) | ref|NP_001234129.1| | 6e-57 | calnexin-like protein precursor [Solanum lycopersicum] dbj|BAD99512.1| calnexin- | 735 | 002695 (21) | ref|XP_009796698.1| | 8e-61 | PREDICTED: calnexin homolog 1-like [Nicotiana sylvestris] |
| JMFF026B12 | Sequence | 358 | 011629 (27) | ref|XP_009627792.1| | 4e-28 | PREDICTED: calnexin homolog 1-like [Nicotiana tomentosiformis] | 748 | 002695 (21) | ref|XP_009796698.1| | 6e-48 | PREDICTED: calnexin homolog 1-like [Nicotiana sylvestris] |
| JMFF028C09 | Sequence | 565 | 011629 (27) | ref|XP_009627792.1| | 6e-81 | PREDICTED: calnexin homolog 1-like [Nicotiana tomentosiformis] | 656 | 002695 (21) | ref|XP_009796698.1| | 6e-49 | PREDICTED: calnexin homolog 1-like [Nicotiana sylvestris] |
| JMFF035M17 | Sequence | 583 | 011629 (27) | ref|XP_009627792.1| | 7e-86 | PREDICTED: calnexin homolog 1-like [Nicotiana tomentosiformis] | 644 | 002695 (21) | ref|XP_006366280.1| | 2e-26 | PREDICTED: calnexin homolog [Solanum tuberosum] |
| JMFF043L06 | Sequence | 628 | 011629 (27) | ref|XP_009627792.1| | 1e-93 | PREDICTED: calnexin homolog 1-like [Nicotiana tomentosiformis] | 587 | 002695 (21) | ref|XP_006366280.1| | 5e-07 | PREDICTED: calnexin homolog [Solanum tuberosum] |
| JMFF046A18 | Sequence | 581 | 011629 (27) | ref|XP_009627792.1| | 1e-78 | PREDICTED: calnexin homolog 1-like [Nicotiana tomentosiformis] | 433 | 002695 (21) | |||
| JMFF046N04 | Sequence | 559 | 011629 (27) | ref|XP_009627792.1| | 3e-76 | PREDICTED: calnexin homolog 1-like [Nicotiana tomentosiformis] | 428 | 002695 (21) | |||
| JMFF047M12 | Sequence | 439 | 011629 (27) | ref|XP_009796698.1| | 5e-46 | PREDICTED: calnexin homolog 1-like [Nicotiana sylvestris] | 422 | 002695 (21) | |||
| JMFN015A18 | Sequence | 620 | 002695 (21) | ref|XP_009796698.1| | 2e-53 | PREDICTED: calnexin homolog 1-like [Nicotiana sylvestris] | |||||
| JMSF008H02 | Sequence | 389 | 011629 (27) | ref|XP_009627792.1| | 6e-39 | PREDICTED: calnexin homolog 1-like [Nicotiana tomentosiformis] | 759 | 002695 (21) | ref|XP_009796698.1| | 2e-54 | PREDICTED: calnexin homolog 1-like [Nicotiana sylvestris] |
| JMSF013F06 | Sequence | 545 | 011629 (27) | ref|XP_009627792.1| | 1e-74 | PREDICTED: calnexin homolog 1-like [Nicotiana tomentosiformis] | 716 | 002695 (21) | ref|XP_009796698.1| | 2e-75 | PREDICTED: calnexin homolog 1-like [Nicotiana sylvestris] |
| JMSF044B04 | Sequence | 128 | 011629 (27) | 573 | 002695 (21) | ref|NP_001234129.1| | 1e-10 | calnexin-like protein precursor [Solanum lycopersicum] dbj|BAD99512.1| calnexin- | |||
| JMSF045O04 | Sequence | 731 | 011629 (27) | ref|XP_009627792.1| | 3e-120 | PREDICTED: calnexin homolog 1-like [Nicotiana tomentosiformis] | 687 | 002695 (21) | ref|XP_009796698.1| | 3e-52 | PREDICTED: calnexin homolog 1-like [Nicotiana sylvestris] |
This contig is upended
. : . : . : . : . : . :
rJMSF013F06+ AAAATGGCACGCTCCCCTCATTGACA
____________________________________________________________
consensus AAAATGGCACGCTCCCCTCATTGACA
. : . : . : . : . : . :
rJMSF013F06+ ACCCCAGTTACAAGGGCATTTGGAAGCCTAGAGAGATCCCNAACCCTGATTACTTTGAAC
rJMFF024O24+ GGAAGCCTAGAGAGATCCCAAACCCTGATTACTTTGAAC
rJMSF008H02+ CCCTGATTACTTTGAAC
____________________________________________________________
consensus ACCCCAGTTACAAGGGCATTTGGAAGCCTAGAGAGATCCCAAACCCTGATTACTTTGAAC
. : . : . : . : . : . :
rJMSF013F06+ TTGACAAA-CCCAACTTTGAGCCTATTGCCGCAGTTGGAATTGAGATCTGGACAATGCAA
rJMFF024O24+ TTGACAAA-CCCAACTTTGAGCCTATTGCCGCAGTTGGAATTGAGATNTGGACAATGCAA
rJMFF028C09+ GCCGCAGTTGGAATTGAGATCTGGACAATGCAA
rJMSF045O04+ ACTTTGAGCCTATTGCCGCAGTTGGAATTGAGATCTGGACAATGCAA
JMFN015A18- CAACTTTGAGCCTATTGCCGCAGTTGGAATTGAGATCTGGACAATGCAA
rJMSF008H02+ TTGACAAACCCCAACTTTGAGCCTATTGCCGCAGTTGGAATTGAGATCTGGACAATGCAA
rJMFF007F04+ GCCGCAGTTGGAATTGAGATNTGGACAATGCAA
rJMFF026B12+ TTGCCGCAGTTGGAATTGAGATNTGGACAATGCAA
rJMFF012G23+ ATGCAA
rJMFF014N16+ CAGTTGGAATTGAGATNTGGACAATGCAA
rJMFF004F10+ GCCGCAGTTGGAATTGAGATNTGGACAATGCAA
rJMFF006P21+ ACAATGCAA
____________________________________________________________
consensus TTGACAAA-CCCAACTTTGAGCCTATTGCCGCAGTTGGAATTGAGATCTGGACAATGCAA
. : . : . : . : . : . :
rJMSF013F06+ GATGGCATCCTGTTTGACAACATCCTCATA-GCTACTGATGAAAAAGTTGCAGAATCTTA
rJMFF024O24+ GATGGCATCCTGTTTGACAACATCCTCATA-GCTACTGATGAAAAAGTTGCAGAATNTTA
rJMFF028C09+ GATGGCATCCTGTTTGACAACATCCTCATA-GCTACTGATGAAAAAGTTGCAGAATNTTA
rJMSF045O04+ GATGGCATCCTGTTTGACAACATCCTCATA-GCTACTGATGAAAAAGTTGCAGAATCTTA
JMFN015A18- GATGGCATCCTGTTTGACAACATCCTCATA-GCTACTGATGAAAAAGTTGCAGAATCTTA
rJMSF008H02+ GATGGCATCCTGTTTGACAACATCCTCATA-GCTACTGATGAAAAAGTTGCAGAATCTTA
rJMFF007F04+ GATGGCATCCTGTTTGACAACATCCTCATA-GCTACTGATGAAAAAGTTGCAGAATCTTA
rJMFF026B12+ GATGGCATCCTGTTTGACAACATCCTCATA-GCTACTGATGAAAAAGTTGCAGAATNTTA
rJMFF012G23+ GATGGCATCCTGTTTGACAACATCCTCATAGGCTACTGATGAAAAAGTTGCAGAATCTTA
rJMFF016D22+ TGATGAAAAAGTTGCAGAATNTTA
rJMFF014N16+ GATGGCATCCTGTTTGACAACATCCTCATA-GCTACTGATGAAAAAGTTGCAGAATNTTA
rJMFF004F10+ GATGGCATCCTGTTTGACAACATCCTCATA-GCTACTGATGAAAAAGTTGCAGAATNTTA
rJMFF006P21+ GATGGCATCCTGTTTGACAACATCCTCATA-GCTACTGATGAAAAAGTTGCAGAATCTTA
____________________________________________________________
consensus GATGGCATCCTGTTTGACAACATCCTCATA-GCTACTGATGAAAAAGTTGCAGAATCTTA
. : . : . : . : . : . :
rJMSF013F06+ TAGACAGACTGCATGGAAGCCTAAGTTTGATGTCGAGAAAGAGAAACAGAAGGCTGAGGA
rJMFF024O24+ TAGACAGACTGCATGGAAGCCTAAGTTTGATGTCGAGAAAGAGAAACAGAAGGCTGAGGA
rJMFF028C09+ TAGACAGACTGCATGGAAGCCTAAGTTTGATGTCGAGAAAGAGAAACAGAAGGCTGAGGA
rJMSF045O04+ TAGACAGACTGCATGGAAGCCTAAGTTTGATGTCGAGAAAGAGAAACAGAAGGCTGAGGA
JMFN015A18- TAGACAGACTGCATGGAAGCCTAAGTTTGATGTCGAGAAAGAGAAACAGAAGGCTGAGGA
rJMSF044B04+ CTGAGGA
rJMSF008H02+ TAGACAGACTGCATGGAAGCCTAAGTTTGATGTCGAGAAAGAGAAACAGAAGGCTGAGGA
rJMFF007F04+ TAGACAGACTGCATGGAAGCCTAAGTTTGATGTCGAGAAAGAGAAACAGAAGGCTGAGGA
rJMFF026B12+ TAGACAGACTGCATGGAAGCCTAAGTTTGATGTCGAGAAAGAGAAACAGAAGGCTGAGGA
rJMFF012G23+ TAGACAGACTGCATGGAAGCCTAAGTTTGATGTCGAGAAAGAGAAACAGAAGGCTGAGGA
rJMFF016D22+ TAGACAGACTGCATGGAAGCCTAAGTTTGATGTCGAGAAAGAGAAACAGAAGGCTGAGGA
rJMFF014N16+ TAGACAGACTGCATGGAAGCCTAAGTTTGATGTCGAGAAAGAGAAACAGAAGGCTGAGGA
rJMFF004F10+ TAGACAGACTGCATGGAAGCCTAAGTTTGATGTCGAGAAAGAGAAACAGAAGGCTGAGGA
rJMFF006P21+ TAGACAGACTGCATGGAAGCCTAAGTTTGATGTCGAGAAAGAGAAACAGAAGGCTGAGGA
rJMFF015G12+ AAGCCTAAGTTTGATGTCGAGAAAGAGAAACAGAAGGCTGAGGA
rJMFF035M17+ GCATGGAAGCCTAAGTTTGATGTCGAGAAAGAGAAACAGAAGGCTGAGGA
____________________________________________________________
consensus TAGACAGACTGCATGGAAGCCTAAGTTTGATGTCGAGAAAGAGAAACAGAAGGCTGAGGA
. : . : . : . : . : . :
rJMSF013F06+ AGTCACAGATTCCGATGGCCTCAAAGGCTACCAG-AAAGTGGTATTCGACCAGCTATATA
rJMFF024O24+ AGTCACAGATTCCGATGGCCTCAAAGGCTACCAG-AAAGTGGTATTCGACCAGCTATATA
rJMFF028C09+ AGTCACAGATTCCGATGGCCTCAAAGGCTACCAG-AAAGTGGTATTCGACCAGCTATATA
rJMSF045O04+ AGTCACAGATTCCGATGGCCTCAAAGGCTACCAG-AAAGTGGTATTCGACCAGCTATATA
JMFN015A18- AGTCACAGATTCCGATGGCCTCAAAGGCTACCAG-AAAGTGGTATTCGACCAGCTATATA
rJMSF044B04+ AGTCCCAGATTCCGATGGCCTCAAAGGCTACCAGNAAAGTGGTATTCGACCAGCTATATA
rJMSF008H02+ AGTCACAGATTCCGATGGCCTCAAAGGCTACCAG-AAAGTGGTATTCGACCAGCTATATA
rJMFF007F04+ AGTCACAGATTCCGATGGCCTCAAAGGCTACCAG-AAAGTGGTATTCGACCAGCTATATA
rJMFF026B12+ AGTCACAGATTCCGATGGCCTCAAAGGCTACCAG-AAAGTGGTATTCGACCAGCTATATA
rJMFF012G23+ AGTCACAGATTCCGATGGCCTCAAAGGCTACCAG-AAAGTGGTATTCGACCAGCTATATA
rJMFF016D22+ AGTCACAGATTCCGATGGCCTCAAAGGCTACCAG-AAAGTGGTATTCGACCAGCTATATA
rJMFF014N16+ AGTCACAGATTCCGATGGCCTCAAAGGCTACCAG-AAAGTGGTATTCGACCAGCTATATA
rJMFF004F10+ AGTCACAGATTCCGATGGCCTCAAAGGCTACCAG-AAAGTGGTATTNGACCAGCTATATA
rJMFF006P21+ AGTCNCAGATTCCGATGGCCTCAAAGGCTACCAG-AAAGTGGTATTCGACCAGCTATATA
rJMFF015G12+ AGTCNCAGATTCCGATGGCCTCAAAGGCTACCAG-AAAGTGGTATTCGACCAGCTATATA
rJMFF035M17+ AGTCACAGATTCCGATGGCCTCAAAGGCTACCAG-AAAGTGGTATTCGACCAGCTATATA
rJMFF043L06+ TATATA
____________________________________________________________
consensus AGTCACAGATTCCGATGGCCTCAAAGGCTACCAG-AAAGTGGTATTCGACCAGCTATATA
. : . : . : . : . : . :
rJMSF013F06+ AGATTGCCGACCTCCCCTTNTTGGGTGAACNCAAGGGCAAAATACTGGATCTACTCGAGA
rJMFF024O24+ AGATTGCCGACCTCCCCTTNTTGGGTGAACNCAAGGGCAAAATNCTGGATNTACTCGAGA
rJMFF028C09+ AGATTGCCGACCTCCCCTTNTTGGGTGAACACAAGGGCAAAATACTGGATNTACTCGAGA
rJMSF045O04+ AGATTGCCGACCTCCCCTTCTTGGGTGAACACAAGGGCAAAATACTGGATCTACTCGAGA
JMFN015A18- AGATTGCCGACCTCCCCTTCTTGGGTGAACACAAGGGCAAAATACTGGATCTACTCGAGA
rJMFF046N04+ CGAGA
rJMSF044B04+ AGATTGCCGACCTCCCCTTCTTGGGTGAACACAAGGGCAAAATACTGGATCTACTCGAGA
rJMSF008H02+ AGATTGCCGACCTCCCCTTCTTGGGTGAACACAAGGGCAAAATACTGGATCTACTCGAGA
rJMFF007F04+ AGATTGCCGACCTCCCCTTNTTGGGTGAACACAAGGGCAAAATACTGGATNTACTCGAGA
rJMFF026B12+ AGATTGCCGACCTCCCCTTCTTGGGTGAACACAAGGGCAAAATACTGGATNTACTCGAGA
rJMFF012G23+ AGATTGCCGACCTCCCCTTCTTGGGTGAACNCAAGGGCAAAATACTGGATNTACTCGAGA
rJMFF016D22+ AGATTGCCGACCTCCCCTTCTTGGGTGAACACAAGGGCAAAATACTGGATNTACACGAGA
rJMFF014N16+ AGATTGCCGACCTCCCCTTCTTGGGTGAACACAAGGGCAAAATACTGGATNTACTCGAGA
rJMFF004F10+ AGATTGCCGACCTCCCCTTCTTGGGTGAACACAAGGGCAAAATACTGGATNTACTCGAGA
rJMFF006P21+ AGATTGCCGACCTCCCCTTNTTGGGTGAACACAAGGGCAAAATACTGGATTTACTCGAGA
rJMFF015G12+ AGATTGCCGACCTCCCCTTCTTGGGTGAACNCAAGGGCAAAATNCTGGATTTNCTNGAGA
rJMFF035M17+ AGATTGCCGACCTCCCCTTCTTGGGTGAACNCAAGGGCAAAATACTGGATTTACTNGAGA
rJMFF043L06+ AGATTGCCGACCTCCCCTTCTTGGGTGAACACAAGGGCAAAATATTGGATCTACTCGAGA
____________________________________________________________
consensus AGATTGCCGACCTCCCCTTCTTGGGTGAACACAAGGGCAAAATACTGGATCTACTCGAGA
. : . : . : . : . : . :
rJMSF013F06+ AGGCTGAGAAACAACCAAACATCACAATTGGAGTTATTGTCTCTGTCATAGTCGTTGTCC
rJMFF024O24+ AGGCTGAGAAACAACCAAACATCACAATTGGAGTTATTGTNTCTGTCATAGTCGTTGTCC
rJMFF028C09+ AGGCTGAGAAACAACCAAACATCACAATTGGAGTTATTGTCTCTGTCATAGTCGTTGTCC
rJMSF045O04+ AGGCTGAGAAACAACCAAACATCACAATTGGAGTTATTGTCTCTGTCATAGTCGTTGTCC
JMFN015A18- AGGCTGAGAAACAACCAAACATCACAATTGGAGTTATTGTCTCTGTCATAGTCGTTGTCC
rJMFF046N04+ AGGCTGAGAAACAACCAAACATCACAATTGGAGTTATTGTCTCTGTCATAGTCGTTGTCC
rJMFF047M12+ CTGTCATAGTCGTTGTCC
rJMSF044B04+ AGGCTGAGAAACAACCAAACATCACAATTGGAGTTATTGTCTCTGTCATAGTCGTTGTCC
rJMSF008H02+ AGGCTGAGAAACAACCAAACATCACAATTGGAGTTATTGTCTCTGTCATAGTCGTTGTCC
rJMFF007F04+ AGGCTGAGAAACAACCAAACATCACAATTGGAGTTATTGTCTCTGTCATAGTCGTTGTCC
rJMFF026B12+ AGGCTGAGAAACAACCAAACATCACAATTGGAGTTATTGTCTCTGTCATAGTCGTTGTCC
rJMFF012G23+ AGGCTGAGAAACAACCAAACATCNCAATTGGAGTTATTGTCTCTGTCATAGTCGTTGTCC
rJMFF016D22+ AGGCTGAGAAACAACCAAACATCACAATTGGAGTTATTGTCTCTGTCATAGTCGTTGTCC
rJMFF014N16+ AGGCTGAGAAACAACCAAACATCACAATTGGAGTTATTGTCTCTGTCATAGTCGTTGTCC
rJMFF004F10+ AGGCTGAGAAACAACCAAACATCACAATTGGAGTTATTGTCTCTGTCATAGTCGTTGTCC
rJMFF006P21+ AGGCTGAGAAACAACCAAACATCNCAATTGGAGTTATTGTCTCTGTCATAGTCGTTGTCC
rJMFF015G12+ AGGNTGAGAAACAACCAAACATCNCAATTGGAGTTATTGTNTNTGTCATAGTCGTTGTCC
rJMFF035M17+ AGGCTGAGAAACAACCAAACATCACAATTGGAGTTATTGTCTCTGTCATAGTCGTTGTCC
rJMFF043L06+ AGGCTGAGAAACAACCAAACATCACAATTGGAGTTATTGTCTCTGTCATAGTCGTTGTCC
____________________________________________________________
consensus AGGCTGAGAAACAACCAAACATCACAATTGGAGTTATTGTCTCTGTCATAGTCGTTGTCC
. : . : . : . : . : . :
rJMSF013F06+ TTACAATATTAGTCAAGCTTCTNTTCGGCGGAAAGAAGCAAATACCTGCTAGACCTGTTG
rJMFF024O24+ TTACAATATTAGTCAAGCTTNTNTTCGGCGGAAAGAAGCAAATACCTGCTAGACCTGTTG
rJMFF028C09+ TTACAATATTAGTCAAGCTTNTNTTCGGCGGAAAGAAGCAAATACCTGCTAGACCTGTTG
rJMSF045O04+ TTACAATATTAGTCAAGCTTCTNTTCGGCGGAAAGAAGCAAATACCTGCTAGACCTGTTG
JMFN015A18- TTACAATATTAGTCAAGCTTCTCTTCGGCGGAAAGAAGCAAATACCTGCTAGACCTGTTG
rJMFF046N04+ TTACAATATTAGTCAAGCTTCTCTTCGGCGGAAAGAAGCAAATACCTGCTAGACCTGTTG
rJMFF047M12+ TTACAATATTAGTCAAGCTTCTCTTCGGCGGAAAGAAGCAAATACCTGCTAGACCTGTTG
rJMSF044B04+ TTACAATATTAGTCAAGCTTCTCTTCGGCGGAAAGAAGCAAATACCTGCTAGACCTGTTG
rJMSF008H02+ TTACAATATTAGTCAAGCTTCTCTTCGGCGGAAAGAAGCAAATACCTGCTAGACCTGTTG
rJMFF007F04+ TTACAATATTAGTCAAGCTTNTNTTCGGCGGAAAGAAGCAAATACCTGCTAGACCTGTTG
rJMFF026B12+ TTACAATATTAGTCAAGCTTNTNTTCGGCGGAAAGAAGCAAATACCTGCTAGACCTGTTG
rJMFF012G23+ TTACAATATTAGTCAAGCTTNTNTTCGGCGGAAAGAAGCAAATACCTGCTAGACCTGTTG
rJMFF016D22+ TTACAATATTAGTCAAGCTTNTNTTCGGCGGAAAGAAGCAAATACCTGCTAGACCTGTTG
rJMFF014N16+ TTACAATATTAGTCAAGCTTNTNTTCGGCGGAAAGAAGCAAATACCTGCTAGACCTGTTG
rJMFF004F10+ TTACAATATTAGTCAAGCTTNTNTTCGGCGGAAAGAAGCAAATACCTGCTAGACCTGTTG
rJMFF006P21+ TTACAATATTAGTCAAGCTTNTNTTCGGCGGAAAGAAGCAAATACCTGCTAGACCTGTTG
rJMFF015G12+ TTACAATATTAGTCAAGCTTTTTTTNGGNGGAAAGAAGCAAATNCCTGCTAGACCTGTTG
rJMFF035M17+ TTACAATATTAGTCAAGCTTNTNTTCGGCGGAAAGAAGCAAATACCTGCTAGACCTGTTG
rJMFF043L06+ TTACAATATTAGTCAAGCTTCTCTTCGGCCGAAAGAAGCAAATACCTGCTAGACCTGTTG
rJMFF015D14+ CCTGTTG
rJMFF046A18+ CCTGCTAGACCTGTTG
____________________________________________________________
consensus TTACAATATTAGTCAAGCTTCTCTTCGGCGGAAAGAAGCAAATACCTGCTAGACCTGTTG
. : . : . : . : . : . :
rJMSF013F06+ AAGAATCCAAGAAGAGCGAAGCTGCAGAGAGTTCAAACAGCCAAGAAGCGTCTGACGAGA
rJMFF024O24+ AAGAATCCAAGAAGAGCGAAGCTGCAGAGAGTTCAAACAGCCAAGAAGCGTNTGACGAGA
rJMFF028C09+ AAGAATCCAAGAAGAGCGAAGCTGCAGAGAGTTCAAACAGCCAAGAAGCGTNTGACGAGA
rJMSF045O04+ AAGAATCCAAGAAGAGCGAAGCTGCAGAGAGTTCAAACAGCCAAGAAGCGTCTGACGAGA
JMFN015A18- AAGAATCCAAGAAGAGCGAAGCTGCAGAGAGTTCAAACAGCCAAGAAGCGTCTGACGAGA
rJMFF046N04+ AAGAATCCAAGAAGAGCGAAGCTGCAGAGAGTTCAAACAGCCAAGAAGCGTCTGACGAGA
rJMFF047M12+ AAGAATCCAAGAAGAGCGAAGCTGCAGAGAGTTCAAACAGCCAAGAAGCGTCTGACGAGA
rJMSF044B04+ AAGAATCCAAGAAGAGCGAAGCTGCAGAGAGTTCAAACAGCCAAGAAGCGTCTGACGAGA
rJMSF008H02+ AAGAATCCAAGAAGAGCGAAGCTGCAGAGAGTTCAAACAGCCAAGAAGCGTCTGACGAGA
rJMFF007F04+ AAGAATCCAAGAAGAGCGAAGCTGCAGAGAGTTCAAACAGCCAAGAAGCGTNTGACGAGA
rJMFF026B12+ AAGAATCCAAGAAGAGCGAAGCTGCAGAGAGTTCAAACAGCCAAGAAGCGTNTGACGAGA
rJMFF012G23+ AAGAATCCAAGAAGAGCGAAGCTGCAGAGAGTTCAAACAGCCAAGAAGCGTNTGACGAGA
rJMFF016D22+ AAGAATCCAAGAAGAGCGAAGCTGCAGAGAGTTCAAACAGCCAAGAAGCGTNTGACGAGA
rJMFF014N16+ AAGAATCCAAGAAGAGCGAAGCTGCAGAGAGTTCAAACAGCCAAGAAGCGTNTGACGAGA
rJMFF004F10+ AAGAATCCAAGAAGAGCGAAGCTGCAGAGAGTTCAAACAGCCAAGAAGCGTNTGACGAGA
rJMFF006P21+ AAGAATCCAAGAAGAGCGAAGCTGCAGAGAGTTCAAACAGCCAAGAAGCGTNTGACGAGA
rJMFF015G12+ AAGAATCCAAGAAGAGNGAAGCTGCAGAGAGTTCAAACAGCCAAGAAGCGTTTGACGAGA
rJMFF035M17+ AAGAATCCAAGAAGAGCGAAGCTGCAGAGAGTTCAAACAGCCAAGAAGCGTNTGACGAGA
rJMFF043L06+ AAGAATCCAAGAAGAGCGAAGCTGCAGAGAGTTCAAACAGCCAAGAAGCGTCTGACGAGA
rJMFF015D14+ AAGAATCCAAGAAGAGNGAANCTGCAGAGAGTTNAAACANCCNAGAAGNGTTTGNCGAGA
rJMFF046A18+ AAGAATCCAAGAAGAGCGAAGCTGCAGAGAGTTCAAACAGCCAAGAAGCGTTTGTCGAGA
____________________________________________________________
consensus AAGAATCCAAGAAGAGCGAAGCTGCAGAGAGTTCAAACAGCCAAGAAGCGTCTGACGAGA
. : . : . : . : . : . :
rJMSF013F06+ AGGAAGAGAAGGAAGAAGAGCATAATGAGGATGGCGCTGCNCCTGCTAGGCGGAGGACTA
rJMFF024O24+ AGGAAGAGAAGGAAGAAGAGCATAATGAGGATGGCGCTGCNCCTGCTAGGCGGAGGACTA
rJMFF028C09+ AGGAAGAGAAGGAAGAAGAGCATAATGAGGATGGCGCTGCNCCTGCTAGGCGGAGGACTA
rJMSF045O04+ AGGAAGAGAAGGAAGAAGAGCATAATGAGGATGGCGCTGCACCTGCTAGGCGGAGGACTA
JMFN015A18- AGGAAGAGAAGGAAGAAGAGCATAATGAGGATGGCGCTGCACCTGCTAGGCGGAGGACTA
rJMFF046N04+ AGGAAGAGAAGGAAGAAGAGCATAATGAGGATGGCGCTGCACCTGCTAGGCGGAGGACTA
rJMFF047M12+ AGGAAGAGAAGGAAGAAGAGCATAATGAGGATGGCGCTGCACCTGCTAGGCGGAGGACTA
rJMSF044B04+ AGGAAGAGAAGGAAGAAGAGCATAATGAGGATGGCGCTGCACCTGCTAGGCGGAGGACTA
rJMSF008H02+ AGGAAGAGAAGGAAGAAGAGCATAATGAGGATGGCGCTGCACCTGCTAGGCGGAGGACTA
rJMFF007F04+ AGGAAGAGAAGGAAGAAGAGCATAATGAGGATGGCGCTGCACCTGCTAGGCGGAGGACTA
rJMFF026B12+ AGGAAGAGAAGGAAGAAGAGCATAATGAGGATGGCGCTGCNCCTGCTAGGCGGAGGACTA
rJMFF012G23+ AGGAAGAGAAGGAAGAAGAGCATAATGAGGATGGCGCTGCNCCTGCTAGGCGGAGGACTA
rJMFF016D22+ AGGAAGAGAAGGAAGAAGAGCATAATGAGGATGGCGCTGCNCCTGCTAGGCGGAGGACTA
rJMFF014N16+ AGGAAGAGAAGGAAGAAGAGCATAATGAGGATGGCGCTGCNCCTGCTAGGCGGAGGACTA
rJMFF004F10+ AGGAAGAGAAGGAAGAAGAGCATAATGAGGATGGCGCTGCNCCTGCTAGGCGGAGGACTA
rJMFF006P21+ AGGAAGAGAAGGAAGAAGAGCATAATGAGGATGGCGCTGCNCCTGCTAGGCGGAGGACTA
rJMFF015G12+ AGGAAGAGAAGGAAGAAGAGCATAATGAGGATGGCGCTGCNCCTGCTAGGCGGAGGACTA
rJMFF035M17+ AGGAAGAGAAGGAAGAAGAGCATAATGAGGATGGCGCTGCNCCTGCTAGGCGGAGGACTA
rJMFF043L06+ AGGAAGAGAAGGAAGAAGAGCATAATGAGGATGGCGCTGCACCTGCTAGGCGGAGGACTA
rJMFF015D14+ AGGAAGAGAAGGAAGAAGAGCATAATGAGGATGGCGCTGCCCCTGNTAGGNGGAGGNCTA
rJMFF046A18+ AGGAAGAGAAGGAAGAAGAGCATAATGAGGATGGCGCTGCCCCTGCTAGGCGGAGGACTA
____________________________________________________________
consensus AGGAAGAGAAGGAAGAAGAGCATAATGAGGATGGCGCTGCACCTGCTAGGCGGAGGACTA
. : . : . : . : . : . :
rJMSF013F06+ GGCGTGATAACTAGGAATAGGGGATGAAAAAGCNCTAGTACATCTTTTTGACATTTTTGA
rJMFF024O24+ GGCGTGATAACTAGGAATAGGGGATG-AAAAGCACTAGTACATNTTTTTGACATTTTTGA
rJMFF028C09+ GGCGTGATAACTAGGAATAGGGGATG-AAAAGCACTAGTACATCTTTTTGACATTTTTGA
rJMSF045O04+ GGCGTGATAACTAGGAATAGGGGATG-AAAAGCNCTAGTACATCTTTTTGACATTTTTGA
JMFN015A18- GGCGTGATAACTAGGAATAGGGGATG-AAAAGCACTAGTACATCTTTNTGACATTTTTGA
rJMFF046N04+ GGCGTGATAACTAGGAATAGGGGATG-AAAAGCACTAGTACATCTTTTTGACATTTTTGA
rJMFF047M12+ GGCGTGATAACTAGGAATAGGGGATG-AAAAGCACTAGTACATCTTTTTGACATTTTTGA
rJMSF044B04+ GGCGTGATAACTAGGAATAGGGGATG-AAAAGCACTAGTACATCTTTTTGACATTTTTGA
rJMSF008H02+ GGCGTGATAACTAGGAATAGGGGATG-AAAAGCACTAGTACATCTTTTTGACATTTTTGA
rJMFF007F04+ GGCGTGATAACTAGGAATAGGGGATG-AAAAGCACTAGTACATNTTTTTGACATTTTTGA
rJMFF026B12+ GGCGTGATAACTAGGAATAGGGGATG-AAAAGCACTAGTACATNTTTTTGACATTTTTGA
rJMFF012G23+ GGCGTGATAACTAGGAATAGGGGATG-AAAAGCACTAGTACATNTTTTTGACATTTTTGA
rJMFF016D22+ GGCGTGATAACTAGGAATAGGGGATG-AAAAGCACTAGTACATCTTTTTGACATTTTTGA
rJMFF014N16+ GGCGTGATAACTAGGAATAGGGGATG-AAAAGCACTAGTACATNTTTTTGACATTTTTGA
rJMFF004F10+ GGCGTGATAACTAGGAATAGGGGATG-AAAAGCACTAGTACATNTTTTTGACATTTTTGA
rJMFF006P21+ GGCGTGATAACTAGGAATAGGGGATG-AAAAGCACTAGTACATNTTTTTGACATTTTTGA
rJMFF015G12+ GGCGTGATAACTAGGAATAGGGGATG-AAAAGCNCTAGTACATNTTTTTGACATTTTTGA
rJMFF035M17+ GGCGTGATAACTAGGAATAGGGGATG-AAAAGCACTAGTACATNTTTTTGACATTTTTGA
rJMFF043L06+ GGCGTGATAACTAGGGATAGGGGATG-AAAAGCACTAGTACATCTTTTTGACATTTTTGA
rJMFF015D14+ GGNGNGATAACTNGGAATAGGGGANG-AAAAGCCCTAGTACATNTTTTTGACATTTTTGA
rJMFF046A18+ GGCGTGATAACTAGGAATAGGGGATG-AAAAGCCCTAGTACATCTTTTTGACATTTTTGA
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consensus GGCGTGATAACTAGGAATAGGGGATG-AAAAGCACTAGTACATCTTTTTGACATTTTTGA
. : . : . : . : . : . :
rJMSF013F06+ AATTGTAG-TTTTTTTTTTCC
rJMFF024O24+ AATTGTAG--TTTTTTTTTTCCGTGTATGCGATTCTGTGCTCTACAAGGTGTGTTTTCAA
rJMFF028C09+ AATTGTAG--TTTTTTTTTTCCGTGTATGCGATTCTGTGCTCTACAAGGTGTGTTTTCAA
rJMSF045O04+ AATTGTAG--TTTTTTTTTTCCGTGTATGCGATTCTGTGCTCTACAAGGTGTGTTTTCAA
JMFN015A18- AATTGTAG--TTTTTTTTTTCCGTGTATGCGATTCT
rJMFF046N04+ AATTGTAG--TTTTTTTTTTCCGTGTATGCGATTCTGTGCTCTACAAGGTGTGTTTTCAA
rJMFF047M12+ AATTGTAG--TTTTTTTTTTCCGTGTATGCGATTCTGTGCTCTACAAGGTGTGTTTTCAA
rJMSF044B04+ AATTGTAG--TTTTTTTTTTCCGTGTATGCGATTCTGTGCTCTACAAGGTGTGTTTTCAA
rJMSF008H02+ AATTGTAG---TTTTTTTTTCCGTGTATGCGATTCTGTGCTCTACAAGGTGTGTTTTCAA
rJMFF007F04+ AATTGTAG--TTTTTTTTTTCCGTGTATGCGATTCTGTGCTCTACAAGGTGTGTTTTCAA
rJMFF026B12+ AATTGTAG--TTTTTTTTTTCCGTGTATGCGATTCTGTGCTCTACAAGGTGTGTTTTCAA
rJMFF012G23+ AATTGTAG--TTTTTTTTTTCCGTGTATGCGATTCTGTGCTCTACAAGGTGTGTTTTCAA
rJMFF016D22+ AATTGTAG--TTTTTTTTTTCCGTGTATGCGATTCTGTGCTCTACAAGGTGTGTTTTCAA
rJMFF014N16+ AATTGTAG--TTTTTTTTTTCCGTGTATGCGATTCTGTGCTCTACAAGGTGTGTTTTCAA
rJMFF004F10+ AATTGTAG--TTTTTTTTTTCCGTGTATGCGATTCTGTGCTCTACAAGGTGTGTTTTCAA
rJMFF006P21+ AATTGTAG--TTTTTTTTTTCCGTGTATGCGATTCTGTGCTCTACAAGGTGTGTTTTCAA
rJMFF015G12+ AATTGTAG-TTTTTTTTTTTCCGTGTATGCGATTCTGTGCTCTACAAGGTGTGTTTTCAA
rJMFF035M17+ AATTGTAG--TTTTTTTTTTCCGTGTATGCGATTCTGTGCTCTACAAGGTGTGTTTTCAA
rJMFF043L06+ AATTGTAG--TTTTTTTTTTCCGTGTATGCGATTCTGTGCTCTACAAGGTGTGTTTTCAA
rJMFF015D14+ AATTGTAGTTTTTTTTTTTTCCGTGTATGCGATTCTGTGCTCTACAAGGTGTGTTTTCAA
rJMFF046A18+ AATTGTAG--TTTTTTTTTTCCGTGTATGCGATTCTGTGCTCTACAAGGTGTGTTTTCAA
____________________________________________________________
consensus AATTGTAG--TTTTTTTTTTCCGTGTATGCGATTCTGTGCTCTACAAGGTGTGTTTTCAA
. : . : . : . : . : . :
rJMFF024O24+ AACGATAGTGTATATTAGACTCATCTGCTTGGCGTATCATTG
rJMFF028C09+ AACGATAGTGTATATTAGACTCATCTGC
rJMSF045O04+ AACGATAGTGTATATTAGACTCATCTGCTTGGCGTATCAT
rJMFF046N04+ AACGATAGTGTATATTAGACTCATCTGCTTGGCGTATCATTGGCGGCTTAATTTTGGCCT
rJMFF047M12+ AACGATAGTGTATATTAGACTCATCTGCTTGGCGTATCATTGGCGGCTTAATTTTGGCCT
rJMSF044B04+ AACGATAGTGTATATTAGACTCATCTGCTTGGCGTATCATTGGCGGCTTAATTTTGGCCT
rJMSF008H02+ AACGATAGTGTATATTAGACTCATCTGCTTGGCGTATCATTGGCGGCTTAATTTTGGCCT
rJMFF007F04+ AACGATAGTGTATATTAGACTCATCTGCTTGGCGTATCATTGGCGGCTTAATTTTGGCCT
rJMFF026B12+ AACGATAGTGTATATTAGACTCATCTGCTTGGCGTATCATTGGCGGCTTAATTTTGGCCT
rJMFF012G23+ AACGATAGTGTATATTAGACTCATCTGCTTGGCGTATCATTGGCGGCTTAATTTTGGCCT
rJMFF016D22+ AACGATAGTGTATATTAGACTCATCTGCTTGGCGTATCATTGGCGGCTTAATTTTGGCCT
rJMFF014N16+ AACGATAGTGTATATTAGACTCATCTGCTTGGCGTATCATTGGCGGCTTAATTTTGGCCT
rJMFF004F10+ AACGATAGTGTATATTAGACTCATCTGCTTGGCGTATCATTGGCGGCTTAATTTTGGCCT
rJMFF006P21+ AACGATAGTGTATATTAGACTCATCTGCTTGGCGTATCATTGGCGGCTTAATTTTGGCCT
rJMFF015G12+ AACGATAGTGTATATTAGACTCATCTGCTTGGCGTATCATTGGCGGCTTAATTTTGGCCT
rJMFF035M17+ AACGATAGTGTATATTAGACTCATCTGCTTGGCGTATCATTGGCGGCTTAATTTTGGCCT
rJMFF043L06+ AACGATAGTGTATATTAGACTCATCTGCTTGGCGTATCATTGGCGGCTTAATTTTGGCCT
rJMFF015D14+ AACGATAGTGTATATTAGACTCATCTGCTTGGCGTATCATTGGCGGCTTAATTTTGGCCT
rJMFF046A18+ AACGATAGTGTATATTAGACTCATCTGCTTGGCGTATCATTGGCGGCTTAATTTTGGCCT
____________________________________________________________
consensus AACGATAGTGTATATTAGACTCATCTGCTTGGCGTATCATTGGCGGCTTAATTTTGGCCT
. : . : . : . : . : . :
rJMFF046N04+ CTATAG
rJMFF047M12+ CTATAGAA
rJMSF044B04+ CTATAGAAC
rJMSF008H02+ CTATAGAACATTTGTGTAAC
rJMFF007F04+ CTATAGAACATTTGTGTAACGGATATTTTCTACTCTTCTAGTATTATT
rJMFF026B12+ CTATAGAACATTTGTGTAACGGATATTTTCTACTCTTCTAGTATTATTTAAGAACGAA
rJMFF012G23+ CTATAGAACATTTGTGTAACGGATATTTTCTACTCTTCTAGTATTATTTAAGAACGAA
rJMFF016D22+ CTATAGAACATTTGTGTAACGGATATTTTCTACTCTTCTAGT
rJMFF014N16+ CTATAGAACATTTGTGTAACGGATATTTTCTACTCTTCTAGTATTATTTAAGAACGAA
rJMFF004F10+ CTATAGAACATTTGTGTAACGGATATTTTCTACTCTTCTAGTATTATTTAAGAACGAA
rJMFF006P21+ CTATAGAACATTTGTGTAACGGATATTTTCTACTCTTCTAGTATTATTTAAGAACGAA
rJMFF015G12+ CTATAGAACATTTGTGTAACGGATATTTTCTACTCTTCTAGTATTATTTAAGAACGAA
rJMFF035M17+ CTATAGAACATTTGTGTAACGGATATTTTCTACTCTTCTAGTATTATTTAAGAACGAA
rJMFF043L06+ CTATAGAACATTTGTGTAACGGATATTTTCTACTCTTCTAGTATTATTTAATGAACGAAT
rJMFF015D14+ CTATAGAACATT
rJMFF046A18+ CTATAGAACATTTGTGTAACGGATATTTTCTACTCTTCTAGTATTATTTAATGAACGAAT
____________________________________________________________
consensus CTATAGAACATTTGTGTAACGGATATTTTCTACTCTTCTAGTATTATTTAAGAACGAAAT
. : . : . : . : . : . :
rJMFF043L06+ GTTATCATTTGGCTT
rJMFF046A18+ GTTATCATTTGGCTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAAAAAAAAAAAAA
____________________________________________________________
consensus GTTATCATTTGGCTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAAAAAAAAAAAAA