Contig 002693:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF028O02Sequence361000257 (2)ref|XP_011096008.1|3e-17PREDICTED: probable membrane-associated kinase regulator 1 [Sesamum indicum]281002693 (2)ref|XP_011096008.1|1e-10PREDICTED: probable membrane-associated kinase regulator 1 [Sesamum indicum]
JMFF045M15Sequence588000257 (2)ref|XP_009781196.1|120PREDICTED: uncharacterized protein LOC104230157 [Nicotiana sylvestris]542002693 (2)ref|XP_006348166.1|7e-24PREDICTED: cell wall protein AWA1-like [Solanum tuberosum]

Alignment

This contig is upended


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rJMFF045M15+                                                                    AA
                      ____________________________________________________________
consensus                                                                       AA
 
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rJMFF045M15+          TGCCGATAAACCCGTAAAAAAAGACAGCAACGTTTCTAAATCCATCAAAAAAGAAGGAAA
                      ____________________________________________________________
consensus             TGCCGATAAACCCGTAAAAAAAGACAGCAACGTTTCTAAATCCATCAAAAAAGAAGGAAA
 
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rJMFF045M15+          CGACTGCCGCCGGAAAAACCCATCCGCCGTCCACGGCGGCGCACCCAAAGCTCGAGTCTT
                      ____________________________________________________________
consensus             CGACTGCCGCCGGAAAAACCCATCCGCCGTCCACGGCGGCGCACCCAAAGCTCGAGTCTT
 
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rJMFF028O02+                  ACGTTCCGATGTGTATCGGATACCGACACCATCTAAGCTGCAGAAGCGACGA
rJMFF045M15+          GAACTTGAACGTTCCGATGTGTATCGGATACCGACACCATCTAAGCTGCAGAAGCGACGA
                      ____________________________________________________________
consensus             GAACTTGAACGTTCCGATGTGTATCGGATACCGACACCATCTAAGCTGCAGAAGCGACGA
 
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rJMFF028O02+          AAACAGTACCATTGCAGTCGCCGCGGCTGCAGCCGCCGCCGCCGCATCTGAAGGCGGTCA
rJMFF045M15+          AAACAGTACCATTGCAGTCGCCGCGGCTGCAGCCGCCGCCGCCGCATTTGAAGGCGGTCA
                      ____________________________________________________________
consensus             AAACAGTACCATTGCAGTCGCCGCGGCTGCAGCCGCCGCCGCCGCATTTGAAGGCGGTCA
 
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rJMFF028O02+          AAACGGCGGCGGAGTTCCCGGCGAAGCAGTACGCGGCAGTAATTTATTTAATCTCCGAAA
rJMFF045M15+          AAACGGCGGCGGAGTTCCCGGCGAAGCAGTACGCGGCAGTAATTTATTTAATCTCCGAAA
                      ____________________________________________________________
consensus             AAACGGCGGCGGAGTTCCCGGCGAAGCAGTACGCGGCAGTAATTTATTTAATCTCCGAAA
 
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rJMFF028O02+          TCTCTTTACCAAGAAAGTATATTAATAGGGTAATTAATCTCTGTTTATCTTCTTAATCAC
rJMFF045M15+          TCTCTTTACCAAGAAAGTATATTAATAGGGTAATTAATCTCTGTTTATCTTCTTAATCAC
                      ____________________________________________________________
consensus             TCTCTTTACCAAGAAAGTATATTAATAGGGTAATTAATCTCTGTTTATCTTCTTAATCAC
 
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rJMFF028O02+          TCCCCTGTTCTAGCTTAACTCCATATATGAATGTATGTAGATTTCTAAC           
rJMFF045M15+          TCCCCTGTTCTAGCTTAACTCCATATATGAATGTATGTAGATTTCTAACTTGAAATTTGA
                      ____________________________________________________________
consensus             TCCCCTGTTCTAGCTTAACTCCATATATGAATGTATGTAGATTTCTAACTTGAAATTTGA
 
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rJMFF045M15+          TGATCTACTTTTTGTAATTTGTGGGTTCTTATTATGTAAATTTCCTAATTAATCGCTTAT
                      ____________________________________________________________
consensus             TGATCTACTTTTTGTAATTTGTGGGTTCTTATTATGTAAATTTCCTAATTAATCGCTTAT
 
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rJMFF045M15+          ATAATATAATTGTGCTTACTGATATTAGTAACATTGAGTAAAAACATTTTTTACTGCTTT
                      ____________________________________________________________
consensus             ATAATATAATTGTGCTTACTGATATTAGTAACATTGAGTAAAAACATTTTTTACTGCTTT