Contig 002690:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF015L24Sequence167008768 (2)436002690 (2)gb|KJB63832.1|8e-42hypothetical protein B456_010G019700 [Gossypium raimondii]
JMFF045I13Sequence638008768 (2)emb|CDP01358.1|8e-44unnamed protein product [Coffea canephora]610002690 (2)gb|KDO84183.1|7e-77hypothetical protein CISIN_1g044877mg [Citrus sinensis]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF045I13+ GACTGGGTTTG
                      ____________________________________________________________
consensus GACTGGGTTTG
 
. : . : . : . : . : . :
rJMFF045I13+ CTGGCCGTATGGGGAATAGGATCTCTGCTCCGAGATTGTTAAAGCTAACTCCTTTGGATT
                      ____________________________________________________________
consensus CTGGCCGTATGGGGAATAGGATCTCTGCTCCGAGATTGTTAAAGCTAACTCCTTTGGATT
 
. : . : . : . : . : . :
rJMFF045I13+ CTCATATTGCTGGAGCTAACAATAGGTTCCAGAAGGCACAATTTTCATGGGTCACGGAGA
                      ____________________________________________________________
consensus CTCATATTGCTGGAGCTAACAATAGGTTCCAGAAGGCACAATTTTCATGGGTCACGGAGA
 
. : . : . : . : . : . :
rJMFF015L24+ CTTGGTTGCAACAGTGGGCAAGTTCAGCGTAATATGGAACT
rJMFF045I13+ ATGGCAAACAGGAGCGCCACTTGGTTGCAACAGTGGGCAAGTTCAGCGTAATATGGAACT
                      ____________________________________________________________
consensus ATGGCAAACAGGAGCGCCACTTGGTTGCAACAGTGGGCAAGTTCAGCGTAATATGGAACT
 
. : . : . : . : . : . :
rJMFF015L24+ TCCAACAGGTGAAAGACGGCGCTCATCAGTGTTACCATAATCAGGTGGGCTTGAAGAGTT
rJMFF045I13+ TCCAACAGGTGAAAGACGGCGCTCATCAGTGTTACCATAATCAGGTGGGCTTGAAGAGTT
                      ____________________________________________________________
consensus TCCAACAGGTGAAAGACGGCGCTCATCAGTGTTACCATAATCAGGTGGGCTTGAAGAGTT
 
. : . : . : . : . : . :
rJMFF015L24+ GCTATTGCTACAAGATTGTTNTAAGAGATGAATCTATCATAGACAGTTGCTTCATGCACG
rJMFF045I13+ GCTATTGCTACAAGATTGTTCTAAGAGATGAATCTATCATAGACAGTTGCTTCATGCACG
                      ____________________________________________________________
consensus GCTATTGCTACAAGATTGTTCTAAGAGATGAATCTATCATAGACAGTTGCTTCATGCACG
 
. : . : . : . : . : . :
rJMFF015L24+ ACAAGTTTGCTGTGNCCGACTCTCCTGAAGCACCTCTCGTGGTTGCCACGCCGCTGAAAG
rJMFF045I13+ ACAAGTTTGCTGTGACCGACTCTCCTGAAGCACCTCTCGTGGTTGCCACGCCGCTGAAAG
                      ____________________________________________________________
consensus ACAAGTTTGCTGTGACCGACTCTCCTGAAGCACCTCTCGTGGTTGCCACGCCGCTGAAAG
 
. : . : . : . : . : . :
rJMFF015L24+ TTAGCTCCTTCAGTATATCAAGCCGGCGCTTGAATCTATAAACTACAAACTTGCTATCTC
rJMFF045I13+ TTAGCTCCTTCAGTATATCAAGCCGGCGCTTGAATCTATAAACTACAAACTTGCTATCTC
                      ____________________________________________________________
consensus TTAGCTCCTTCAGTATATCAAGCCGGCGCTTGAATCTATAAACTACAAACTTGCTATCTC
 
. : . : . : . : . : . :
rJMFF015L24+ TTCAGTCATAATAGATTGGTCTTTAGTCAGTCCAGCATATCTGAACAGAGCCCTTTTGTT
rJMFF045I13+ TTCAGTCATAATAGATTGGTCTTTAGTCAGTCCAGCATATCTGAACAGAGCCCTTTTGTT
                      ____________________________________________________________
consensus TTCAGTCATAATAGATTGGTCTTTAGTCAGTCCAGCATATCTGAACAGAGCCCTTTTGTT
 
. : . : . : . : . : . :
rJMFF015L24+ CATTTATGCATCCTNTTAGATTTCATCTGTCATGGAAGAAGAATTGATGTATNTTTGGTC
rJMFF045I13+ CATTTATGCATCCTCTTAGATTTCATCTGTCATGGAAGAAGAATTGATGTATCTTTGGTC
                      ____________________________________________________________
consensus CATTTATGCATCCTCTTAGATTTCATCTGTCATGGAAGAAGAATTGATGTATCTTTGGTC
 
. : . : . : . : . : . :
rJMFF015L24+ ATTGCTTGAAAAGCTGTATATTTGGAAGCTATTTC
rJMFF045I13+ ATTGCTTGAAAAG-TGTATATTTGGAAGCTATTTCAAAGAGACTTGACTTTTATGTAAAG
                      ____________________________________________________________
consensus ATTGCTTGAAAAGCTGTATATTTGGAAGCTATTTCAAAGAGACTTGACTTTTATGTAAAG