Contig 002690:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF015L24Sequence167008768 (2)436002690 (2)gb|KJB63832.1|8e-42hypothetical protein B456_010G019700 [Gossypium raimondii]
JMFF045I13Sequence638008768 (2)emb|CDP01358.1|8e-44unnamed protein product [Coffea canephora]610002690 (2)gb|KDO84183.1|7e-77hypothetical protein CISIN_1g044877mg [Citrus sinensis]

Alignment

This contig is upended


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rJMFF045I13+                                                           GACTGGGTTTG
                      ____________________________________________________________
consensus                                                              GACTGGGTTTG
 
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rJMFF045I13+          CTGGCCGTATGGGGAATAGGATCTCTGCTCCGAGATTGTTAAAGCTAACTCCTTTGGATT
                      ____________________________________________________________
consensus             CTGGCCGTATGGGGAATAGGATCTCTGCTCCGAGATTGTTAAAGCTAACTCCTTTGGATT
 
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rJMFF045I13+          CTCATATTGCTGGAGCTAACAATAGGTTCCAGAAGGCACAATTTTCATGGGTCACGGAGA
                      ____________________________________________________________
consensus             CTCATATTGCTGGAGCTAACAATAGGTTCCAGAAGGCACAATTTTCATGGGTCACGGAGA
 
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rJMFF015L24+                             CTTGGTTGCAACAGTGGGCAAGTTCAGCGTAATATGGAACT
rJMFF045I13+          ATGGCAAACAGGAGCGCCACTTGGTTGCAACAGTGGGCAAGTTCAGCGTAATATGGAACT
                      ____________________________________________________________
consensus             ATGGCAAACAGGAGCGCCACTTGGTTGCAACAGTGGGCAAGTTCAGCGTAATATGGAACT
 
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rJMFF015L24+          TCCAACAGGTGAAAGACGGCGCTCATCAGTGTTACCATAATCAGGTGGGCTTGAAGAGTT
rJMFF045I13+          TCCAACAGGTGAAAGACGGCGCTCATCAGTGTTACCATAATCAGGTGGGCTTGAAGAGTT
                      ____________________________________________________________
consensus             TCCAACAGGTGAAAGACGGCGCTCATCAGTGTTACCATAATCAGGTGGGCTTGAAGAGTT
 
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rJMFF015L24+          GCTATTGCTACAAGATTGTTNTAAGAGATGAATCTATCATAGACAGTTGCTTCATGCACG
rJMFF045I13+          GCTATTGCTACAAGATTGTTCTAAGAGATGAATCTATCATAGACAGTTGCTTCATGCACG
                      ____________________________________________________________
consensus             GCTATTGCTACAAGATTGTTCTAAGAGATGAATCTATCATAGACAGTTGCTTCATGCACG
 
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rJMFF015L24+          ACAAGTTTGCTGTGNCCGACTCTCCTGAAGCACCTCTCGTGGTTGCCACGCCGCTGAAAG
rJMFF045I13+          ACAAGTTTGCTGTGACCGACTCTCCTGAAGCACCTCTCGTGGTTGCCACGCCGCTGAAAG
                      ____________________________________________________________
consensus             ACAAGTTTGCTGTGACCGACTCTCCTGAAGCACCTCTCGTGGTTGCCACGCCGCTGAAAG
 
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rJMFF015L24+          TTAGCTCCTTCAGTATATCAAGCCGGCGCTTGAATCTATAAACTACAAACTTGCTATCTC
rJMFF045I13+          TTAGCTCCTTCAGTATATCAAGCCGGCGCTTGAATCTATAAACTACAAACTTGCTATCTC
                      ____________________________________________________________
consensus             TTAGCTCCTTCAGTATATCAAGCCGGCGCTTGAATCTATAAACTACAAACTTGCTATCTC
 
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rJMFF015L24+          TTCAGTCATAATAGATTGGTCTTTAGTCAGTCCAGCATATCTGAACAGAGCCCTTTTGTT
rJMFF045I13+          TTCAGTCATAATAGATTGGTCTTTAGTCAGTCCAGCATATCTGAACAGAGCCCTTTTGTT
                      ____________________________________________________________
consensus             TTCAGTCATAATAGATTGGTCTTTAGTCAGTCCAGCATATCTGAACAGAGCCCTTTTGTT
 
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rJMFF015L24+          CATTTATGCATCCTNTTAGATTTCATCTGTCATGGAAGAAGAATTGATGTATNTTTGGTC
rJMFF045I13+          CATTTATGCATCCTCTTAGATTTCATCTGTCATGGAAGAAGAATTGATGTATCTTTGGTC
                      ____________________________________________________________
consensus             CATTTATGCATCCTCTTAGATTTCATCTGTCATGGAAGAAGAATTGATGTATCTTTGGTC
 
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rJMFF015L24+          ATTGCTTGAAAAGCTGTATATTTGGAAGCTATTTC                         
rJMFF045I13+          ATTGCTTGAAAAG-TGTATATTTGGAAGCTATTTCAAAGAGACTTGACTTTTATGTAAAG
                      ____________________________________________________________
consensus             ATTGCTTGAAAAGCTGTATATTTGGAAGCTATTTCAAAGAGACTTGACTTTTATGTAAAG