Contig 002688:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF011M03Sequence550000070 (4)ref|XP_009800487.1|2e-64PREDICTED: acetylornithine aminotransferase, mitochondrial [Nicotiana sylvestri720002688 (9)ref|XP_011082096.1|9e-91PREDICTED: acetylornithine aminotransferase, chloroplastic/mitochondrial-like [
JMFF014O13Sequence579000070 (4)ref|XP_009800487.1|1e-31PREDICTED: acetylornithine aminotransferase, mitochondrial [Nicotiana sylvestri678002688 (9)ref|XP_011082096.1|5e-81PREDICTED: acetylornithine aminotransferase, chloroplastic/mitochondrial-like [
JMFF020I19Sequence763002688 (9)ref|XP_011082096.1|2e-99PREDICTED: acetylornithine aminotransferase, chloroplastic/mitochondrial-like [
JMFF041B20Sequence650000070 (4)ref|XP_009628466.1|1e-90PREDICTED: acetylornithine aminotransferase, mitochondrial [Nicotiana tomentosi583002688 (9)ref|XP_002530446.1|2e-52acetylornithine aminotransferase, putative [Ricinus communis] gb|EEF31916.1| ace
JMFF041E10Sequence621002688 (9)ref|XP_002530446.1|2e-57acetylornithine aminotransferase, putative [Ricinus communis] gb|EEF31916.1| ace
JMFF045E14Sequence263000070 (4)659002688 (9)ref|XP_002530446.1|5e-60acetylornithine aminotransferase, putative [Ricinus communis] gb|EEF31916.1| ace
JMFN010A09Sequence615002688 (9)ref|XP_011082096.1|2e-76PREDICTED: acetylornithine aminotransferase, chloroplastic/mitochondrial-like [
JMFS030A08Sequence544002688 (9)ref|XP_009628466.1|5e-119PREDICTED: acetylornithine aminotransferase, mitochondrial [Nicotiana tomentosi
JMFS030B03Sequence614002688 (9)ref|XP_009628466.1|3e-123PREDICTED: acetylornithine aminotransferase, mitochondrial [Nicotiana tomentosi

Alignment

This contig is upended


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JMFS030A08-                                               GACATGGAGCAGCCTCCTGTGGAG
JMFS030B03-                                               GACATGGAGCAGCCTCCTGTGGAG
                      ____________________________________________________________
consensus                                                 GACATGGAGCAGCCTCCTGTGGAG
 
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JMFS030A08-           TTTATTGCCTTCTCCAATTGCTTTCATGGGAGGACTATGGGTGCTGTTGCTTTGACAAGT
JMFS030B03-           TTTATTGCCTTCTCCAATTGCTTTCATGGGAGGACTATGGGTGCTGTTGCTTTGACAAGT
                      ____________________________________________________________
consensus             TTTATTGCCTTCTCCAATTGCTTTCATGGGAGGACTATGGGTGCTGTTGCTTTGACAAGT
 
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JMFS030A08-           AAAGAGCATTATAGGTCACCATTTGAACCTGTGATGCCGGGAGTTACTTTCTTAGAATAT
JMFS030B03-           AAAGAGCATTATAGGTCACCATTTGAACCTGTGATGCCGGGAGTTACTTTCTTAGAATAT
                      ____________________________________________________________
consensus             AAAGAGCATTATAGGTCACCATTTGAACCTGTGATGCCGGGAGTTACTTTCTTAGAATAT
 
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JMFS030A08-           GGTAATATTCAGGCAGCAACAGAACTGATTCAGAGTGGAAAAATTGCTGCCGTTTTTGTG
JMFS030B03-           GGTAATATTCAGGCAGCAACAGAACTGATTCAGAGTGGAAAAATTGCTGCCGTTTTTGTG
                      ____________________________________________________________
consensus             GGTAATATTCAGGCAGCAACAGAACTGATTCAGAGTGGAAAAATTGCTGCCGTTTTTGTG
 
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JMFS030A08-           GAACCAATCCAGGGTGAAGGGGGCATATATAGTGCTACAAAGGAGTTTTTACAAGCTCTA
JMFS030B03-           GAACCAATCCAGGGTGAAGGGGGCATATATAGTGCTACAAAGGAGTTTTTACAAGCTCTA
rJMFF020I19+                        TGAAGGGGGCATATATAGTGNTACAAAGGAGTTTTTACAAGCTNTA
rJMFF011M03+                                                                    TA
                      ____________________________________________________________
consensus             GAACCAATCCAGGGTGAAGGGGGCATATATAGTGCTACAAAGGAGTTTTTACAAGCTCTA
 
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JMFS030A08-           CGTACTTCCTGTGATAATGCTGGTTCACTTCTTGTGTTTGATGAGGTTCAATGTGGCCTA
JMFS030B03-           CGTACTTCCTGTGATAATGCTGGTTCACTTCTTGTGTTTGATGAGGTTCAATGTGGCCTA
rJMFF020I19+          CGTACTTCCTGTGATAATGCTGGTTCACTTCTTGTGTTTGATGAGGTTCAATGTGGCCTA
JMFN010A09-                                                                     TA
rJMFF014O13+                                                 GATGAGGTTCAATGTGGCNTA
rJMFF011M03+          CGTACTTCCTGTGATAATGCTGGTTCACTTCTTGTGTTTGATGAGGTTCAATGTGGCCTA
                      ____________________________________________________________
consensus             CGTACTTCCTGTGATAATGCTGGTTCACTTCTTGTGTTTGATGAGGTTCAATGTGGCCTA
 
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JMFS030A08-           GGACGAACTGGTTATCTTTGGGCGCATGAAGCATATGGTGTATACCCGGATATAATGACA
JMFS030B03-           GGACGAACTGGTTATCTTTGGGCGCATGAAGCATATGGTGTATACCCGGATATAATGACA
rJMFF020I19+          GGACGAACTGGTTATCTTTGGGCGCATGAAGCATATGGTGTATACCCGGATATAATGACA
JMFN010A09-           GGACGAACTGGTTATCTTTGGGCGCATGAAGCATATGGTGTATACCCGGATATAATGACA
rJMFF014O13+          GGACGAACTGGTTATCTTTGGGCGCATGAAGCATATGGTGTATACCCGGATATAATGACA
rJMFF011M03+          GGACGAACTGGTTATCTTTGGGCGCATGAAGCATATGGTGTATACCCGGATATAATGACA
                      ____________________________________________________________
consensus             GGACGAACTGGTTATCTTTGGGCGCATGAAGCATATGGTGTATACCCGGATATAATGACA
 
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JMFS030A08-           CTAGCCAAGCCCCTTGCCGGAGGTCTACCTATCGGGGCCGTGCTGGTGACCGAGAAGGTA
JMFS030B03-           CTAGCCAAGCCCCTTGCCGGAGGTCTACCTATCGGGGCCGTGCTGGTGACCGAGAAGGTA
rJMFF020I19+          CTAGCCAAGCCCCTTGCCGGAGGTCTACCTATCGGGGCCGTGCTGGTGACCGAGAAGGTA
JMFN010A09-           CTAGCCAAGCCCCTTGCCGGAGGTCTACCTATCGGGGCCGTGCTGGTGACCGAGAAGGTA
rJMFF014O13+          CTAGCCAAGCCCCTTGCCGGAGGTCTACCTATCGGGGCCGTGCTGGTGACCGAGAAGGTA
rJMFF011M03+          CTAGCCAAGCCCCTTGCCGGAGGTCTACCTATCGGGGCCGTGCTGGTGACCGAGAAGGTA
rJMFF041E10+                        TGCCGGAGGTCTACCTATCGGGGCCGTGCTGGTGACCGAGAAGGTA
rJMFF041B20+                                              GCCGTGCTGGTGACCGAGAAGGTA
rJMFF045E14+           TAGCCAAGCCCCTTGCCGGAGGTCTACCTATCGGGGCCGTGCTGGTGACCGAGAAGGTA
                      ____________________________________________________________
consensus             CTAGCCAAGCCCCTTGCCGGAGGTCTACCTATCGGGGCCGTGCTGGTGACCGAGAAGGTA
 
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JMFS030A08-           GCCGCTGCCATAAACTATGGAGATCATGGCAGCACCTTTGCCGGTGGTCCTCTGGTGTGC
JMFS030B03-           GCCGCTGCCATAAACTATGGAGATCATGGCAGCACCTTTGCCGGTGGTCCTCTGGTGTGC
rJMFF020I19+          GCCGCTGCCATAAACTATGGAGATCATGGCAGCACCTTTGCCGGTGGTCCTCTGGTGTGC
JMFN010A09-           GCCGCTGCCATAAACTATGGAGATCATGGCAGCACCTTTGCCGGTGGTCCTCTGGTGTGC
rJMFF014O13+          GCCGCTGCCATAAACTATGGAGATCATGGCAGCACCTTTGCCGGTGGTCCTCTGGTGTGC
rJMFF011M03+          GCCGCTGCCATAAACTATGGAGATCATGGCAGCACCTTTGCCGGTGGTCCTCTGGTGTGC
rJMFF041E10+          GCCGCTGCCATAAACTATGGAGATCATGGCAGCACCTTTGCCGGTGGTCCTCTGGTGTGC
rJMFF041B20+          GCCGCTGCCATAAACTATGGAGATCATGGCAGCACCTTTGCCGGTGGTCCTCTGGTGTGC
rJMFF045E14+          GCCGCTGCCATAAACTATGGAGATCATGGCAGCACCTTTGCCGGTGGTCCTCTGGTGTGC
                      ____________________________________________________________
consensus             GCCGCTGCCATAAACTATGGAGATCATGGCAGCACCTTTGCCGGTGGTCCTCTGGTGTGC
 
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JMFS030A08-           AATGCCGCAGTCACTGTACTGGAGAAAATTTCAAACCCGG                    
JMFS030B03-           AATGCCGCAGTCACTGTACTGGAGAAAATTTCAAACCCGGAATTTCTGGCCAGTGTTTCC
rJMFF020I19+          AATGCCGCAGTCACTGTACTGGAGAAAATTTCAAACCCGGAATTTCTGGCCAGTGTTTCC
JMFN010A09-           AATGCCGCAGTCACTGTACTGGAGAAAATTTCAAACCCGGAATTTCTGGCCAGTGTTTCC
rJMFF014O13+          AATGCCGCAGTCACTGTACTGGAGAAAATTTCAAACCCGGAATTTCTGGCCAGTGTTTCC
rJMFF011M03+          AATGCCGCAGTCACTGTACTGGAGAAAATTTCAAACCCGGAATTTCTGGCCAGTGTTTCC
rJMFF041E10+          AATGCCGCAGTCACTGTACTGGAGAAAATTTCAAACCCGGAATTTCTGGCCAGTGTTTCC
rJMFF041B20+          AATGCCGCAGTCACTGTACTGGAGAAAATTTCAAACCCGGAATTTCTGGCCAGTGTTTCC
rJMFF045E14+          AATGCCGCAGTCACTGTACTGGAGAAAATTTCAAACCCGGAATTTCTGGCCAGTGTTTCC
                      ____________________________________________________________
consensus             AATGCCGCAGTCACTGTACTGGAGAAAATTTCAAACCCGGAATTTCTGGCCAGTGTTTCC
 
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JMFS030B03-           GAC-AAGGACAGTACTTAAAAGAATTGTTGGGCAAGAAGTTGGGAGGAAAC         
rJMFF020I19+          GACAAAGGACAGTACTTAAAAGAATTGTTGGGCAAGAAGTTGGGAGGAAACAATCACGTG
JMFN010A09-           GACAAAGGACAGTACTTAAAAGAATTGTTGGGCAAGAAGTTGGGAGGAAACAATCACGTG
rJMFF014O13+          GACAAAGGACAGTACTTAAAAGAATTGTTGGGCAAGAAGTTGGGAGGAAACAATCACGTG
rJMFF011M03+          GACAAAGGACAGTACTTAAAAGAATTGTTGGGCAAGAAGTTGGGAGGAAACAATCACGTG
rJMFF041E10+          GACAAAGGACAGTACTTAAAAGAATTGTTGGGCAAGAAGTTGGGAGGAAACAATCACGTG
rJMFF041B20+          GACAAAGGACAGTACTTAAAAGAATTGTTGGGCAAGAAGTTGGGAGGAAACAATCACGTG
rJMFF045E14+          GACAAAGGACAGTACTTAAAAGAATTGTTGGGCAAGAAGTTGGGAGGAAACAATCACGTG
                      ____________________________________________________________
consensus             GACAAAGGACAGTACTTAAAAGAATTGTTGGGCAAGAAGTTGGGAGGAAACAATCACGTG
 
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rJMFF020I19+          AAGGAGATAAGAGGCTTAGGGCTGATCATCGGCATAGAACTCGATGTGGCGGCAACGCCA
JMFN010A09-           AAGGAGATAAGAGGCTTAGGGCTGATCATCGGCATAGAACTCGATGTGGCGGCAACGCCA
rJMFF014O13+          AAGGAGATAAGAGGCTTAGGGCTGATCATCGGCATAGAACTCGATGTGGCGGCAACGCCA
rJMFF011M03+          AAGGAGATAAGAGGCTTAGGGCTGATCATCGGCATAGAACTCGATGTGGCGGCAACGCCA
rJMFF041E10+          AAGGAGATAAGAGGCTTAGGGCTGATCATCGGCATAGAACTCGATGTGGCGGCAACGCCA
rJMFF041B20+          AAGGAGATAAGAGGCTTAGGGCTGATCATCGGCATAGAACTCGATGTGGCGGCAACGCCA
rJMFF045E14+          AAGGAGATAAGAGGCTTAGGGCTGATCATCGGCATAGAACTCGATGTGGCGGCAACGCCA
                      ____________________________________________________________
consensus             AAGGAGATAAGAGGCTTAGGGCTGATCATCGGCATAGAACTCGATGTGGCGGCAACGCCA
 
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rJMFF020I19+          CTCGTGGAGGCGTGTCAAAACTCCGGCCTCCTCGTTTTAACTGCCGGAAAAGGCAACGTT
JMFN010A09-           CTCGTGGAGGCGTGTCAAAACTCCGGCCTCCTCGTTTTAACTGCCGGAAAAGGCAACGTT
rJMFF014O13+          CTCGTGGAGGCGTGTCAAAACTCCGGCCTCCTCGTTTTAACTGCCGGAAAAGGCAACGTT
rJMFF011M03+          CTCGTGGAGGCGTGTCAAAACTCCGGCCTCCTCGTTTTAACTGCCGGAAAAGGCAACGTT
rJMFF041E10+          CTCGTGGAGGCGTGTCAAAACTCCGGCCTCCTCGTTTTAACTGCCGGAAAAGGCAACGTT
rJMFF041B20+          CTCGTGGAGGCGTGTCAAAACTCCGGCCTCCTCGTTTTAACTGCCGGAAAAGGCAACGTT
rJMFF045E14+          CTCGTGGAGGCGTGTCAAAACTCCGGCCTCCTCGTTTTAACTGCCGGAAAAGGCAACGTT
                      ____________________________________________________________
consensus             CTCGTGGAGGCGTGTCAAAACTCCGGCCTCCTCGTTTTAACTGCCGGAAAAGGCAACGTT
 
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rJMFF020I19+          GTGAGGCTTGTTCCTCCTCTCATCATCTCAAAGCAGGAATTAGAGCAAGCAGCCGATGTT
JMFN010A09-           GTGAGGCTTGTTCCTCCTCTCATCATCTCAAAGCAGGAATTAGAGCAAGCAGCCGATGTT
rJMFF014O13+          GTGAGGCTTGTTCCTCCTCTCATCATCTCAAAGCAGGAATTAGAGCAAGCAGCCGATGTT
rJMFF011M03+          GTGAGGCTTGTTCCTCCTCTCATCATCTCAAAGCAGGAATTAGAGCAAGCAGCCGATGTT
rJMFF041E10+          GTGAGGCTTGTTCCTCCTCTCATCATCTCAAAGCAGGAATTAGAGCAAGCAGCCGATGTT
rJMFF041B20+          GTGAGGCTTGTTCCTCCTCTCATCATCTCAAAGCAGGAATTAGAGCAAGCAGCCGATGTT
rJMFF045E14+          GTGAGGCTTGTTCCTCCTCTCATCATCTCAAAGCAGGAATTAGAGCAAGCAGCCGATGTT
                      ____________________________________________________________
consensus             GTGAGGCTTGTTCCTCCTCTCATCATCTCAAAGCAGGAATTAGAGCAAGCAGCCGATGTT
 
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rJMFF020I19+          TTAGCTGCCTGTTTGCCTGTGTTGGATAAGAGCACCTAAGTTGTCATAGCTCTGCTTGTC
JMFN010A09-           TTAGCTGCCTGTTTGCCTGTGTTGGATAAGAGCACCTAAGTTGTCATAGCTCTGCTTGTC
rJMFF014O13+          TTAGCTGCCTGTTTGCCTGTGTTGGATAAGAGCACCTAAGTTGTCATAGCTCTGCTTGTC
rJMFF011M03+          TTAGCTGCCTGTTTGCCTGTGTTGGATAAGAGCACCTAAGTTGTCATAGCTCTGCTTGTC
rJMFF041E10+          TTAGCTGCCTGTTTGCCTGTGTTGGATAAGAGCACCTAAGTTGTCATAGCTCTGCTTGTC
rJMFF041B20+          TTAGCTGCCTGTTTGCCTGTGTTGGATAAGAGCACCTAAGTTGTCATAGCTCTGCTTGTC
rJMFF045E14+          TTAGCTGCCTGTTTGCCTGTGTTGGATAAGAGCACCTAAGTTGTCATAGCTCTGCTTGTC
                      ____________________________________________________________
consensus             TTAGCTGCCTGTTTGCCTGTGTTGGATAAGAGCACCTAAGTTGTCATAGCTCTGCTTGTC
 
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rJMFF020I19+          TGTAAGCTTTTCATTATACAAGTAATTTGGTTTTTGTTTGCATTTGTTAGTAAAAAAAAC
JMFN010A09-           TGTAAGCTTTTCATTATACAAGTAATTTGGTTTTTGTTTGCATTTGTTAGTAAAAAAAAC
rJMFF014O13+          TGTAAGCTTTTCATTATACAAGTAATTTGGTTTTTGTTTGCATTTGTTAGTAAAAAAAAC
rJMFF011M03+          TGTAAGCTTTTCATTATACAAGTAATTTGGTTTTTGTTTGCATTTGTTAGTAAAAAAAAC
rJMFF041E10+          TGTAAGCTTTTCATTATACAAGTAATTTGGTTTTTGTTTGCATTTGTTAGTAAAAAAAAC
rJMFF041B20+          TGTAAGCTTTTCATTATACAAGTAATTTGGTTTTTGTTTGCATTTGTTAGTAAAAAAAAC
rJMFF045E14+          TGTAAGCTTTTCATTATACAAGTAATTTGGTTTTTGTTTGCATTTGTTAGTAAAAAAAAC
                      ____________________________________________________________
consensus             TGTAAGCTTTTCATTATACAAGTAATTTGGTTTTTGTTTGCATTTGTTAGTAAAAAAAAC
 
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rJMFF020I19+          TCACTACTTCCCTAGAGTCCGTATGTAACATTTATGAATGTTTAAAAATATCAAATT   
JMFN010A09-           TCACTACTTCCCT                                               
rJMFF014O13+          TCACTACTTCCCTAGAGTCCGTATGTAACATTTATGAATGTTTAAAAATATCAAATT   
rJMFF011M03+          TCACTACTTCCCTAGAGTCCGTATGTAACATTTATGAATGTTTAAAAATATCAAATTG  
rJMFF041E10+          TCACTACTTCCCTAGAGTCCGTATGTAACATTTATGAATGTTTAAAAATATCAAATTGGT
rJMFF041B20+          TCACTACTTCCCTAGAGTCCGTATGTAACATTTATGAATGTTTAAAAATATCAAATTGGT
rJMFF045E14+          TCACTACTTCCCTAGAGTCCGTATGTAACATTTATGAATGTTTAAAAATATCAAATTGGT
                      ____________________________________________________________
consensus             TCACTACTTCCCTAGAGTCCGTATGTAACATTTATGAATGTTTAAAAATATCAAATTGGT
 
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rJMFF041E10+          ACTGATAATTTCTTTGAGT                                         
rJMFF041B20+          ACTGATAATTTCTTTGAGT                                         
rJMFF045E14+          ACTGATAATTTCTTTGAGTAAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG
                      ____________________________________________________________
consensus             ACTGATAATTTCTTTGAGTAAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG