Contig 002685:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF008L12Sequence284011756 (5)ref|XP_004228600.1|9e-30PREDICTED: formate--tetrahydrofolate ligase [Solanum lycopersicum]770002685 (5)ref|XP_006354188.1|5e-98PREDICTED: formate--tetrahydrofolate ligase-like [Solanum tuberosum]
JMFF017C19Sequence511002685 (5)ref|XP_009778644.1|1e-105PREDICTED: formate--tetrahydrofolate ligase [Nicotiana sylvestris]712002685 (5)ref|XP_010479507.1|1e-122PREDICTED: formate--tetrahydrofolate ligase-like [Camelina sativa]
JMFF044H06Sequence668011756 (5)ref|XP_004228600.1|1e-108PREDICTED: formate--tetrahydrofolate ligase [Solanum lycopersicum]458002685 (5)ref|XP_009778643.1|2e-21PREDICTED: formate--tetrahydrofolate ligase-like [Nicotiana sylvestris]
JMSF046L05Sequence624011756 (5)ref|XP_004228600.1|1e-98PREDICTED: formate--tetrahydrofolate ligase [Solanum lycopersicum]843002685 (5)ref|XP_002891578.1|2e-16510-formyltetrahydrofolate synthetase [Arabidopsis lyrata subsp. lyrata] gb|EFH6

Alignment

This contig is upended


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JMFF017C19-               CCCTCACAACGTCCCTCACCGATATGAGGGAGAGGCTAGGGAAAATGGTTGTCGGG
                      ____________________________________________________________
consensus                 CCCTCACAACGTCCCTCACCGATATGAGGGAGAGGCTAGGGAAAATGGTTGTCGGG
 
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JMFF017C19-           AATAGCAAGGCCGGTGATCCGGTTACAGCTGATGATCTCGGTGTTGGAGGTGCTTTGACT
                      ____________________________________________________________
consensus             AATAGCAAGGCCGGTGATCCGGTTACAGCTGATGATCTCGGTGTTGGAGGTGCTTTGACT
 
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JMFF017C19-           GTACTGATGAAAGACGCGATAAATCCCACTCTGATGCAGACGCTCGAGGGTACCCCTGTC
                      ____________________________________________________________
consensus             GTACTGATGAAAGACGCGATAAATCCCACTCTGATGCAGACGCTCGAGGGTACCCCTGTC
 
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JMFF017C19-           CTTGCCCACGCAGGTCCTTTTGCGAATATCGCCCACGGGAATTCATCTATAGTTGCTGAC
                      ____________________________________________________________
consensus             CTTGCCCACGCAGGTCCTTTTGCGAATATCGCCCACGGGAATTCATCTATAGTTGCTGAC
 
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JMFF017C19-           AAGATCGCGCTAAAACTCGTGGGACCCGGTGGGTTCGTGGTGACAGAGGCTGGCTTTGGT
                      ____________________________________________________________
consensus             AAGATCGCGCTAAAACTCGTGGGACCCGGTGGGTTCGTGGTGACAGAGGCTGGCTTTGGT
 
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JMFF017C19-           TCTGATATCGGGACCGAGAAGTTCATGAACATAAAGTGTAGATATAGCGGCTTGAAACCC
rJMSF046L05+                       CCGAGAAGTTCATGAACATAAAGTGTAGATATAGCGGCTTGAAACCC
                      ____________________________________________________________
consensus             TCTGATATCGGGACCGAGAAGTTCATGAACATAAAGTGTAGATATAGCGGCTTGAAACCC
 
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JMFF017C19-           CAATGCGCTATAATCGTTGCAACGGTGAGGGCCCTCAAGATGCATGGCGGAGGGCCGGAA
rJMSF046L05+          CAATGCGCTATAATCGTTGCAACGGTGAGGGCCCTCAAGATGCATGGCGGAGGGCCGGAA
                      ____________________________________________________________
consensus             CAATGCGCTATAATCGTTGCAACGGTGAGGGCCCTCAAGATGCATGGCGGAGGGCCGGAA
 
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JMFF017C19-           GTTGTAGCTGGAAGGGCGCTTGACAGTGCTTATGTAAACGANAACATCTCACTCGTTGAA
rJMSF046L05+          GTTGTAGCTGGAAGGGCGCTTGACAGTGCTTATGTAAACGAGAACATCTCACTCGTTGAA
                      ____________________________________________________________
consensus             GTTGTAGCTGGAAGGGCGCTTGACAGTGCTTATGTAAACGAGAACATCTCACTCGTTGAA
 
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JMFF017C19-           GCTGGTTGCGTTAATCTGGCCCGACACATATCGAA                         
rJMSF046L05+          GCTGGTTGCGTTAATCTGGCCCGACACATATCGAACACAAAAGCTTATGGCGTAAATGTT
rJMFF017C19+                                GACACATATCGAACACAAAAGCTTATGGCGTAAATGTT
                      ____________________________________________________________
consensus             GCTGGTTGCGTTAATCTGGCCCGACACATATCGAACACAAAAGCTTATGGCGTAAATGTT
 
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rJMSF046L05+          GTGGTAGCGGTGAACATGTTCTCGACTGATACTGAAGCAGAGCTGAATGCCGTTAGGAAT
rJMFF017C19+          GTGGTAGCGGTGAACATGTTCTCGACTGATACTGAAGCAGAGCTGAATGCCGTTAGGAAT
rJMFF008L12+                                                                  GAAT
                      ____________________________________________________________
consensus             GTGGTAGCGGTGAACATGTTCTCGACTGATACTGAAGCAGAGCTGAATGCCGTTAGGAAT
 
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rJMSF046L05+          GCATCGTTAGCAGCAGGGGCATTCGATGCCATAATTTGTAGCCATCATGCCCACGGTGGG
rJMFF017C19+          GCATCGTTAGCAGCAGGGGCATTCGATGCCATAATTTGTAGCCATCATGCCCACGGTGGG
rJMFF008L12+          GCATCGTTAGCAGCAGGGNCATTCGATGCCATAATTTGTAGCCATCATGCCCACGGTGGG
                      ____________________________________________________________
consensus             GCATCGTTAGCAGCAGGGGCATTCGATGCCATAATTTGTAGCCATCATGCCCACGGTGGG
 
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rJMSF046L05+          AAAGGAGCGGTGGACCTCGGAGTTGCAGTTCAAAAGGCCTGTGAGAACGTTTCACAACCG
rJMFF017C19+          AAAGGAGCGGTGGACCTCGGAGTTGCAGTTCAAAAGGCCTGTGAGAACGTTTCACAACCG
rJMFF008L12+          AAAGGAGCGGTGGACCTCGGAGTTGCAGTTCAAAAGGCCTGTGAGAACGTTTCACAACCG
                      ____________________________________________________________
consensus             AAAGGAGCGGTGGACCTCGGAGTTGCAGTTCAAAAGGCCTGTGAGAACGTTTCACAACCG
 
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rJMSF046L05+          TTGCAATTCCTGTACCCTCTGGATATCGGGATTAAAGATAAAATTGAGGCAATCGCAAAG
rJMFF017C19+          TTGCAATTCCTGTACCCTCTGGATATCGGGATTAAAGATAAAATTGAGGCAATCGCAAAG
rJMFF008L12+          TTGCAATTCCTGTACCCTCTGGATATCGGGATTAAAGATAAAATTGAGGCAATCGCAAAG
                      ____________________________________________________________
consensus             TTGCAATTCCTGTACCCTCTGGATATCGGGATTAAAGATAAAATTGAGGCAATCGCAAAG
 
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rJMSF046L05+          TCATATGGTGCCAATGGCGTTGAGTACTCTGAACAGGCCGAGAAACAGATTGAGATGTAC
rJMFF017C19+          TCATATGGTGCCAATGGCGTTGAGTACTCTGAACAGGCCGAGAAACAGATTGAGATGTAC
rJMFF008L12+          TCATATGGTGCCAATGGCGTTGAGTACTCTGAACAGGCCGAGAAACAGATTGAGATGTAC
                      ____________________________________________________________
consensus             TCATATGGTGCCAATGGCGTTGAGTACTCTGAACAGGCCGAGAAACAGATTGAGATGTAC
 
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rJMSF046L05+          AGCAAGCAAGGATTTTCCAATCTCCCGATTTGCATGGCTAAGACTCAGTATTCGTTTTCG
rJMFF017C19+          AGCAAGCAAGGATTTTCCAATCTCCCGATTTGCATGGCTAAGACTCAGTATTCGTTTTCG
rJMFF008L12+          AGCAAGCAAGGATTTTCCAATCTCCCGATTTGCATGGCTAAGACTCAGTATTCGTTTTCG
                      ____________________________________________________________
consensus             AGCAAGCAAGGATTTTCCAATCTCCCGATTTGCATGGCTAAGACTCAGTATTCGTTTTCG
 
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rJMSF046L05+          CATGATGCTAAAGCAAAGGGAGCTCCAGGCGGGTTTATACTTCCGATCAGGGATGTGAGG
rJMFF017C19+          CATGATGCTAAAGCAAAGGGAGCTCCAGGCGGGTTTATACTTCCGATCAGGGATGTGAGG
rJMFF008L12+          CATGATGCTAAAGCAAAGGGAGCTCCAGGCGGGTTTATACTTCCGATCAGGGATGTGAGG
rJMFF044H06+                                 TCCAGGCGGGTTTATACTTCCGATCAGGGATGTGAGG
                      ____________________________________________________________
consensus             CATGATGCTAAAGCAAAGGGAGCTCCAGGCGGGTTTATACTTCCGATCAGGGATGTGAGG
 
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rJMSF046L05+          GCGAGCATTGGAGCTGGATTCATCTATCCTCTCGTCGGAACAATGAGCACGATGCCTGGC
rJMFF017C19+          GCGAGCATTGGAGCTGGATTCATCTATCCTCTCGTCGGAACAATGAGCACGATGCCTGGC
rJMFF008L12+          GCGAGCATTGGAGCTGGATTCATCTATCCTCTCGTCGGAACAATGAGCACGATGCCTGGC
rJMFF044H06+          GGGAGCATTGGAGCTGGATTCATTTATCCTTTTGTTGGAACAATGAGCACGATGCCTGGC
                      ____________________________________________________________
consensus             GCGAGCATTGGAGCTGGATTCATCTATCCTCTCGTCGGAACAATGAGCACGATGCCTGGC
 
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rJMSF046L05+          CTGCCAACGAGGCCTTGCTTCTACGAGATTGATCTCGACACTAAAACTGGAAGAGTTATT
rJMFF017C19+          CTGCCAACGAGGCCTTGCTTCTACGAGATTGATCTCGACACTAAAACTGGAAGAGTTATT
rJMFF008L12+          CTGCCAACGAGGCCTTGCTTCTACGAGATTGATCTCGACACTAAAACTGGAAGAGTTATT
rJMFF044H06+          CTGCCAAAGAGGCCTTGTTTTTTCGAGATTGATTTTGGCCCTAAAACTGGAAGAGTTATT
                      ____________________________________________________________
consensus             CTGCCAACGAGGCCTTGCTTCTACGAGATTGATCTCGACACTAAAACTGGAAGAGTTATT
 
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rJMSF046L05+          GGCCTTTCTTGAATCCAGAAAGGTGAGTTTCATGCTGAATAAAATGGCTGTACTACCATG
rJMFF017C19+          GGCCTTTCTTGAATCCAGAAAGGTGAGTTTCATGCTGAATAAAATGGCTGTACTACCATG
rJMFF008L12+          GGCCTTTCTTGAATCCAGAAAGGTGAGTTTCATGCTGAATAAAATGGCTGTACTACCATG
rJMFF044H06+          GGCCTTTTTTGAATCCAGAAAGGGGAGTTTCATGGTGAATAAAAAGGGTGTTCTACCATG
                      ____________________________________________________________
consensus             GGCCTTTCTTGAATCCAGAAAGGTGAGTTTCATGCTGAATAAAATGGCTGTACTACCATG
 
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rJMSF046L05+          CTACATCGCCGAAATT                                            
rJMFF017C19+          CTACATCGCCGAAATTGACTTACATGTTTTTTGAAGTTTTCTCTAAGCAATAAACAA   
rJMFF008L12+          CTACATCGCCGAAATTGACTTACATGTTTTTTGAAGTTTTCTCTAAGCAATAAACAATTT
rJMFF044H06+          ATACATTGCCGAAATTGACTTACAAGTTTTTTGAAGTTTTTTTTAAGCAATAAACAAATT
                      ____________________________________________________________
consensus             CTACATCGCCGAAATTGACTTACATGTTTTTTGAAGTTTTCTCTAAGCAATAAACAATTT
 
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rJMFF008L12+          CTCATCTTCTTTTTCAGTGGATTTTCTCTTGAGTTCTGATTCTCAATTAAATCTCTTGTT
rJMFF044H06+          TTCATTTTTTTTTTCAGGGGATTTTTTTTTGAGTTTTGATTTTCAAATAAATTTTTTGTT
                      ____________________________________________________________
consensus             TTCATTTTTTTTTTCAGTGGATTTTTTTTTGAGTTTTGATTTTCAATTAAATTTTTTGTT
 
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rJMFF008L12+          CTAATTGTCTCATTAGTCAAATTCTGTGGTGAATTGGTGGATCTGTAAATCAGTAATCCA
rJMFF044H06+          TTAATTGTTTCATTAGTCAAATTTTGTGGGGAAATGGGGGATTTGTAAATCAGTAATCCC
                      ____________________________________________________________
consensus             TTAATTGTTTCATTAGTCAAATTTTGTGGTGAATTGGTGGATTTGTAAATCAGTAATCCC
 
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rJMFF008L12+          CAAATTTTAACTTGTACATGTAAACAATGGAACATCATAAAACCTA              
rJMFF044H06+          CAAATTTTAACTTGTTCATGTAAACAATGGGACATCATAAAACCTATTGTCCTATAACTG
                      ____________________________________________________________
consensus             CAAATTTTAACTTGTTCATGTAAACAATGGGACATCATAAAACCTATTGTCCTATAACTG