Contig 002684:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF012G22Sequence532000799 (17)ref|XP_011082617.1|5e-34PREDICTED: histone H1-like [Sesamum indicum]776002684 (24)ref|XP_011082617.1|3e-12PREDICTED: histone H1-like [Sesamum indicum]
JMFF014P19Sequence570000799 (17)ref|XP_011082617.1|1e-36PREDICTED: histone H1-like [Sesamum indicum]372002684 (24)
JMFF023G09Sequence422000799 (17)ref|XP_011082617.1|1e-22PREDICTED: histone H1-like [Sesamum indicum]776002684 (24)ref|XP_011082617.1|3e-09PREDICTED: histone H1-like [Sesamum indicum]
JMFF024F13Sequence427000799 (17)ref|XP_011082617.1|2e-23PREDICTED: histone H1-like [Sesamum indicum]727002684 (24)
JMFF024O17Sequence426000799 (17)ref|XP_011082617.1|2e-23PREDICTED: histone H1-like [Sesamum indicum]775002684 (24)ref|XP_011082617.1|6e-04PREDICTED: histone H1-like [Sesamum indicum]
JMFF026I02Sequence537000799 (17)ref|XP_011082617.1|5e-34PREDICTED: histone H1-like [Sesamum indicum]770002684 (24)
JMFF032B05Sequence537000799 (17)ref|XP_011082617.1|8e-33PREDICTED: histone H1-like [Sesamum indicum]708002684 (24)
JMFF038G15Sequence533000799 (17)ref|XP_011082617.1|5e-34PREDICTED: histone H1-like [Sesamum indicum]742002684 (24)ref|XP_011082617.1|6e-04PREDICTED: histone H1-like [Sesamum indicum]
JMFF043E20Sequence634000799 (17)ref|XP_011082617.1|7e-37PREDICTED: histone H1-like [Sesamum indicum]595002684 (24)
JMFF044F16Sequence621000799 (17)ref|XP_011082617.1|2e-35PREDICTED: histone H1-like [Sesamum indicum]570002684 (24)
JMFF045D23Sequence627000799 (17)ref|XP_011082617.1|5e-33PREDICTED: histone H1-like [Sesamum indicum]610002684 (24)
JMFF047J10Sequence601000799 (17)ref|XP_011082617.1|5e-34PREDICTED: histone H1-like [Sesamum indicum]494002684 (24)
JMFF050I12Sequence597002684 (24)ref|XP_011082617.1|2e-28PREDICTED: histone H1-like [Sesamum indicum]526002684 (24)
JMFN014P13Sequence628002684 (24)
JMFN016K09Sequence589002684 (24)ref|XP_011082617.1|7e-22PREDICTED: histone H1-like [Sesamum indicum]
JMFN039G03Sequence626002684 (24)
JMSF013I21Sequence229000799 (17)745002684 (24)
JMSF027I23Sequence669000799 (17)ref|XP_011082617.1|2e-36PREDICTED: histone H1-like [Sesamum indicum]739002684 (24)ref|XP_011082617.1|1e-04PREDICTED: histone H1-like [Sesamum indicum]
JMSF028L16Sequence665000799 (17)ref|XP_011082617.1|1e-36PREDICTED: histone H1-like [Sesamum indicum]742002684 (24)ref|XP_011082617.1|1e-04PREDICTED: histone H1-like [Sesamum indicum]
JMSF029H21Sequence652024201ref|XP_009797505.1|5e-71PREDICTED: flavanone 3-dioxygenase [Nicotiana sylvestris]750002684 (24)ref|XP_011082617.1|5e-08PREDICTED: histone H1-like [Sesamum indicum]
JMSF046D23Sequence769002684 (24)ref|XP_011082617.1|9e-31PREDICTED: histone H1-like [Sesamum indicum]817002684 (24)ref|XP_011082617.1|3e-15PREDICTED: histone H1-like [Sesamum indicum]
JMSF050O04Sequence666007770 (81)gb|AFU50387.1|1e-98chloroplast ribulose bisphosphate carboxylase/oxygenase activase small isoform 745002684 (24)ref|XP_011082617.1|2e-28PREDICTED: histone H1-like [Sesamum indicum]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF050I12- AACACCGGAGAACGGAAATAAAATAGTATAGTTTCATAGC
JMSF046D23- GAACACCGGAGAACGGAAATAAAATAGTATAGTTTCATAGC
                      ____________________________________________________________
consensus GAACACCGGAGAACGGAAATAAAATAGTATAGTTTCATAGC
 
. : . : . : . : . : . :
JMFF050I12- TCTCTCTCTCTAGATCTCTTTTCTCTCTTTTTGGTCCTTTGATCTCTGCTCCTTCCCAAA
JMSF046D23- TCTCTCTCTCTAGATCTCTTTTCTCTCTTTTTGGTCCTTTGATCTCTGCTCCTTCCCAAA
                      ____________________________________________________________
consensus TCTCTCTCTCTAGATCTCTTTTCTCTCTTTTTGGTCCTTTGATCTCTGCTCCTTCCCAAA
 
. : . : . : . : . : . :
JMFF050I12- CCCTAGGCCTAGAAATGGCTGCTGAGGAACCGGTTGTTATGGTGGAGGTGACGGCTGACC
JMSF046D23- CCCTAGGCCTAGAAATGGCTGCTGAGGAACCGGTTGTTATGGTGGAGGTGACGGCTGACC
                      ____________________________________________________________
consensus CCCTAGGCCTAGAAATGGCTGCTGAGGAACCGGTTGTTATGGTGGAGGTGACGGCTGACC
 
. : . : . : . : . : . :
JMFF050I12- CGGTCGAATCTGAGCCCTCCAAGGAGGAGGAGGCCCCTGCTCCGGCGAAGGCCACCAAGG
JMSF046D23- CGGTCGAATCTGAGCCCTCCAAGGAGGAGGAGGCCCCTGCTCCGGCGAAGGCCACCAAGG
                      ____________________________________________________________
consensus CGGTCGAATCTGAGCCCTCCAAGGAGGAGGAGGCCCCTGCTCCGGCGAAGGCCACCAAGG
 
. : . : . : . : . : . :
JMFF050I12- CCAAGAAGGCTAAGGAGACCAAGGCTAAGAAGCCTGCTGCTCCCAGGAAGAAGAACCCTA
JMSF046D23- CCAAGAAGGCTAAGGAGACCAAGGCTAAGAAGCCTGCTGCTCCCAGGAAGAAGAACCCTA
                      ____________________________________________________________
consensus CCAAGAAGGCTAAGGAGACCAAGGCTAAGAAGCCTGCTGCTCCCAGGAAGAAGAACCCTA
 
. : . : . : . : . : . :
JMFF050I12- GCCATCCTCCTTACTTTGAGGTACGGATTCTTTTCATGTTTTGTTTGTTTAGATTTTGAG
JMSF046D23- GCCATCCTCCTTACTTTGAGGTACGGATTCTTTTCATGTTTTGTTTGTTTAGATTTTGAG
                      ____________________________________________________________
consensus GCCATCCTCCTTACTTTGAGGTACGGATTCTTTTCATGTTTTGTTTGTTTAGATTTTGAG
 
. : . : . : . : . : . :
JMFF050I12- CTGGAATTGGAATTCATTTTTGGTTGAATTTGTTGCAGATGATTCAGGAGGCGATTGTGA
JMSF046D23- CTGGAATTGGAATTCATTTTTGGTTGAATTTGTTGCAGATGATTCAGGAGGCGATTGTGA
rJMSF050O04+ CAGATGATTCAGGAGGCGATTGTGA
                      ____________________________________________________________
consensus CTGGAATTGGAATTCATTTTTGGTTGAATTTGTTGCAGATGATTCAGGAGGCGATTGTGA
 
. : . : . : . : . : . :
JMFF050I12- CTCTGAAGGAGAGGACTGGATCGAGCCAGTACGCGA-TCCAGAAATTCATTGAGGATAAG
JMSF046D23- CTCTGAAGGAGAGGACTGGATCGAGCCAGTACGCGA-TCCAGAAATTCATTGAGGATAAG
JMFN016K09- GGACTGGATCGAGCCAGTACGCGA-TCCAGAAATTCATTGAGGATAAG
rJMSF050O04+ CTCTGAAGGAGAGGACTGGATCGAGCCAGTACGCGA-TCCAGAAATTCATTGAGGATAAG
rJMFF023G09+ ATTCATTGAGGATAAG
rJMSF046D23+ TGAAGGAGAGGACTGGATCGAGCCAGTACGCGATTCCAGAAATTCATTGAGGATAAG
rJMFF012G22+ GGATAAG
                      ____________________________________________________________
consensus CTCTGAAGGAGAGGACTGGATCGAGCCAGTACGCGA-TCCAGAAATTCATTGAGGATAAG
 
. : . : . : . : . : . :
JMFF050I12- CAGAAGAATCTGCCTCC-GAATTTCAGGAAGCTCTTGCTGGTTCAGTTGAGGAAGTTTGT
JMSF046D23- CAGAAGAATCTGCCTCC-GAATTTCAGGAAGCTCTTGCTGGTTCAGTTGAGGAAGTTTGT
JMFN016K09- CAGAAGAATCTGCCTCC-GAATTTCAGGAAGCTCTTGCTGGTTCAGTTGAGGAAGTTTGT
rJMSF050O04+ CAGAAGAATCTGCNTCC-GAATTTCAGGAAGCTCTTGCTGGTTCAGTTGAGGAAGTTTGT
rJMFF023G09+ CAGAAGAATCTGCCTCCGGAATTTCAGGAAGCTCTTGCTGGTTCAGTTGAGGAAGTTTGT
rJMSF046D23+ CAGAAGAATCTGCCTCC-GAATTTCAGGAAGCTCTTGCTGGTTCAGTTGAGGAAGTTTGT
rJMSF029H21+ CCTCC-GAATTTCAGGAAGCTCTTGCTGGTTCAGTTGAGGAAGTTTGT
rJMFF038G15+ AAGCTCTTGCTGGTTCAGTTGAGGAAGTTTGT
rJMSF027I23+ CAGGAAGCTCTTGCTGGTTCAGTTGAGGAAGTTTGT
rJMSF028L16+ TCAGGAAGCTCTTGCTGGTTCAGTTGAGGAAGTTTGT
rJMSF013I21+ ATTTCAGGAAGCTCTTGCTGGTTCAGTTGAGGAAGTTTGT
rJMFF012G22+ CAGAAGAATCTGCCTCC-GAATTTCAGGAAGCTCTTGCTGGTTCAGTTGAGGAAGTTTGT
rJMFF026I02+ TGCTGGTTCAGTTGAGGAAGTTTGT
rJMFF024O17+ GGAAGCTCTTGCTGGTTCAGTTGAGGAAGTTTGT
                      ____________________________________________________________
consensus CAGAAGAATCTGCCTCC-GAATTTCAGGAAGCTCTTGCTGGTTCAGTTGAGGAAGTTTGT
 
. : . : . : . : . : . :
JMFF050I12- GGCTTCTGACAAGCTCGTGAAGGTGAAGAACTCGTATAAGATTCCATCGGCTNCGTCGTC
JMSF046D23- GGCTTCTGACAAGCTCGTGAAGGTGAAGAACTCGTATAAGATTCCATCGGCTCGGTCGTC
JMFN016K09- GGCTTCTGACAAGCTCGTGAAGGTGAAGAACTCGTATAAGATTCCATCGGCTCGGTCGTC
rJMSF050O04+ GGCTTCTGACAAGCTCGTGAAGGTGAAGAACTCGTATAAGATTCCATCGGCTCGGTCGTC
JMFN014P13- TAAGATTCCATCGGCTCGGTCGTC
JMFN039G03- GCTCGGTCGTC
rJMFF023G09+ GGCTTCTGACAAGCTCGTGAAGGTGAAGAACTCGTATAAGATTCCATCGGCTCGGTCGTC
rJMSF046D23+ GGCTTCTGACAAGCTCGTGAAGGTGAAGAACTCGTATAAGATTCCATCGGCTCGGTCGTC
rJMSF029H21+ GGCTTCTGACAAGCTCGTGAAGGTGAAGAACTCGTATAAGATTCCATCGGCTCGGTCGTC
rJMFF038G15+ GGCTTCTGACAAGCTCGTGAAGGTGAAGAACTCGTATAAGATTCCATCGGCTCGGTCGTC
rJMSF027I23+ GGCTTCTGACAAGCTCGTGAAGGTGAAGAACTCGTATAAGATTCCATCGGCTCGGTCGTC
rJMSF028L16+ GGCTTCTGACAAGCTCGTGAAGGTGAAGAACTCGTATAAGATTCCATCGGCTCGGTCGTC
rJMSF013I21+ GGCTTTTGACNAGCTCGTGAAGGTGAAGAACTCGTATAAGATTCCATCGGCTCGGTCGTC
rJMFF012G22+ GGCTTCTGACAAGCTCGTGAAGGTGAAGAACTCGTATAAGATTCCATCGGCTCGGTCGTC
rJMFF026I02+ GGCTTCTGACAAGCTCGTGAAGGTGAAGAACTCGTATAAGATTCCATCGGCTCGGTCGTC
rJMFF032B05+ AGGTGAAGAACTCGTATAAGATTCCATCGGCTCGGTCGTC
rJMFF024F13+ TGACAAGCTCGTGAAGGTGAAGAACTCGTATAAGATTCCATCGGCTCGGTCGTC
rJMFF024O17+ GGCTTCTGACAAGCTCGTGAAGGTGAAGAACTCGTATAAGATTCCATCGGCTCGGTCGTC
                      ____________________________________________________________
consensus GGCTTCTGACAAGCTCGTGAAGGTGAAGAACTCGTATAAGATTCCATCGGCTCGGTCGTC
 
. : . : . : . : . : . :
JMFF050I12- TGCCGCCCAGCCTGCTGCA
JMSF046D23- TGCCGCCAAGCCTGCTGCACCGGCCGCTCCGGCGAAGAAGAAGCCTGCGACGGC-GGCGA
JMFN016K09- TGCCGCCAAGCCTGCTGCACCGGCCGCTCCGGCGAAGAAGAAGCCTGCGACGGC-GGCGA
rJMSF050O04+ TGCCGCCAAGCCTGCTGCACCGGCCGCTCCGGCGAAGAAGAAGCCTGCGACGGC-GGCGA
JMFN014P13- TGCCGCCAAGCCTGCTGCACCGGCCGCTCCGGCGAAGAAGAAGCCTGCGACGGC-GGCGA
JMFN039G03- TGCCGCCAAGCCTGCTGCACCGGCCGCTCCGGCGAAGAAGAAGCCTGCGACGGC-GGCGA
rJMFF023G09+ TGCCGCCAAGCCTGCTGCACCGGCCGCTCCGGCGAAGAAGAAGCCTGCGACGGC-GGCGA
rJMSF046D23+ TGCCGCCAAGCCTGCTGCACCGGCCGCTCCGGCGAAGAAGAAGCCTGCGACGGC-GGCGA
rJMSF029H21+ TGCCGCCAAGCCTGCTGCACCGGCCGCTCCGGCGAAGAAGAAGCCTGCGACGGC-GGCGA
rJMFF038G15+ TGCCGCCAAGCCTGCTGCACCGGCCGCTCCGGCGAAGAAGAAGCCTGCGACGGC-GGCGA
rJMSF027I23+ TGCCGCCAAGCCTGCTGCACCGGCCGCTCCGGCGAAGAAGAAGCCTGCGACGGC-GGCGA
rJMSF028L16+ TGCCGCCAAGCCTGCTGCACCGGCCGCTCCGGCGAAGAAGAAGCCTGCGACGGC-GGCGA
rJMSF013I21+ TGCCGCCAAGCCTGCTGCACCGGCCGCTCCGGCGAAGAAGAAGCCTGCACGGC--GGCGA
rJMFF012G22+ TGCCGCCAAGCCTGCTGCACCGGCCGCTCCGGCGAAGAAGAAGCCTGCGACGGC-GGCGA
rJMFF026I02+ TGCCGCCAAGCCTGCTGCACCGGCCGCTCCGGCGAAGAAGAAGCCTGCGACGGCGGGCGA
rJMFF032B05+ TGCCGCCAAGCCTGCTGCACCGGCCGCTCCGGCGAAGAAGAAGCCTGCGACGGC-GGCGA
rJMFF024F13+ TGCCGCCAAGCCTGCTGCACCGGCCGCTCCGGCGAAGAAGAAGCNTGCGACGGC-GGCGA
rJMFF024O17+ TGCCGCCAAGCCTGCTGCACCGGCCGCTCCGGCGAAGAAGAAGCCTGCGACGGC-GGGCG
                      ____________________________________________________________
consensus TGCCGCCAAGCCTGCTGCACCGGCCGCTCCGGCGAAGAAGAAGCCTGCGACGGC-GGCGA
 
. : . : . : . : . : . :
JMSF046D23- AGCCAAAGGCTACCAAGGAGAAGAAGGCTGCTGCCCCTGCCAAGCCCAAGCCTAAGCCTA
JMFN016K09- AGCCAAAGGCTACCAAGGAGAAGAAGGCTGCTGCCCCTGCCAAGCCCAAGCCTAAGCCTA
rJMSF050O04+ AGCCAAAGGCTACCAAGGAGAAGAAGGCTGCTGCCCCTGCCAAGCCCAAGCCTAAGCCTA
JMFN014P13- AGCCAAAGGCTACCAAGGAGAAGAAGGCTGCTGCCCCTGCCAAGCCCAAGCCTAAGCCTA
JMFN039G03- AGCCAAAGGCTACCAAGGAGAAGAAGGCTGCTGCCCCTGCCAAGCCCAAGCCTAAGCCTA
rJMFF023G09+ AGCCAAAGGCTACCAAGGAGAAGAAGGCTGCTGCCCCTGCCAAGCCCAAGCCTAAGCCTA
rJMSF046D23+ AGCCAAAGGCTACCAAGGAGAAGAAGGCTGCTGCCCCTGCCAAGCCCAAGCCTAAGCCTA
rJMSF029H21+ AGCCAAAGGCTACCAAGGAGAAGAAGGCTGCTGCCCCTGCCAAGCCCAAGCCTAAGCCTA
rJMFF038G15+ AGCCAAAGGCTACCAAGGAGAAGAAGGCTGCTGCCCCTGCCAAGCCCAAGCCTAAGCCTA
rJMSF027I23+ AGCCAAAGGCTACCAAGGAGAAGAAGGCTGCTGCCCCTGCCAAGCCCAAGCCTAAGCCTA
rJMSF028L16+ AGCCAAAGGCTACCAAGGAGAAGAAGGCTGCTGCCCCTGCCAAGCCCAAGCCTAAGCCTA
rJMSF013I21+ AGCCAAAGGCTACCAAGGAGAAGAAGGCTGCTGCCCCTGCCAAGCCCAAGCCTAAGCCTA
rJMFF012G22+ AGCCAAAGGCTACCAAGGAGAAGAAGGCTGCTGCCCCTGCCAAGCCCAAGCCTAAGCCTA
rJMFF026I02+ AGCCAAAGGCTACCAAGGAGAAGAAGGCTGCTGCCCCTGCCAAGCCCAAGCCTAAGCCTA
rJMFF032B05+ AGCCAAAGGCTACCAAGGAGAAGAAGGCTGCTGCCCCTGCCAAGCCCAAGCCTAAGCCTA
rJMFF045D23+ TACCAAGGAGAAGAAGGCTGCTGCCCCTGCCAAGCCCAAGCCTAAGCCTA
rJMFF024F13+ AGCCAAAGGCTACCAAGGAGAAGAAGGCTGCTGCCCCTGCCAAGCCCAAGCCTAAGCCTA
rJMFF024O17+ AAGCAAAGGCTACCAAGGAGAAGAAGGCTGCTGCCCCTGCCAAGCCCAAGCCTAAGCCTA
rJMFF043E20+ CAAGCCCAAGCCTAAGCCTA
                      ____________________________________________________________
consensus AGCCAAAGGCTACCAAGGAGAAGAAGGCTGCTGCCCCTGCCAAGCCCAAGCCTAAGCCTA
 
. : . : . : . : . : . :
JMSF046D23- AGGCCAAGGCTGCTGCCAAGCCCAAAAGCCGCGGCCAAGCCGAAGGCGAAGCCCGCTGCT
JMFN016K09- AGGCCAAGGCTGCTGCCAAGCCC-AAAGCCGCGGCCAAGCCGAAGGCGAAGCCCGCTGCT
rJMSF050O04+ AGGCCAAGGCTGCTGCCAAGCCC-AAAGCCGCGGCCAAGCCGAAGGCGAAGCCCGCTGCT
JMFN014P13- AGGCCAAGGCTGCTGCCAAGCCC-AAAGCCGCGGCCAAGCCGAAGGCGAAGCCCGCTGCT
JMFN039G03- AGGCCAAGGCTGCTGCCAAGCCC-AAAGCCGCGGCCAAGCCGAAGGCGAAGCCCGCTGCT
rJMFF023G09+ AGGCCAAGGCTGCTGCCAAGCCC-AAAGCCGCGGCCAAGCCGAAGGCGAAGCCCGCTGCT
rJMSF046D23+ AGGCCAAGGCTGCTGCCAAGCCC-AAAGCCGCGGCCAAGCCGAAGGCGAAGCCCGCTGCT
rJMSF029H21+ AGGCCAAGGCTGCTGCCAAGCCC-AAAGCCGCGGCCAAGCCGAAGGCGAAGCCCGCTGCT
rJMFF038G15+ AGGCCAAGGCTGCTGCCAAGCCC-AAAGCCGCGGCCAAGCCGAAGGCGAAGCCCGCTGCT
rJMSF027I23+ AGGCCAAGGCTGCTGCCAAGCCC-AAAGCCGCGGCCAAGCCGAAGGCGAAGCCCGCTGCT
rJMSF028L16+ AGGCCAAGGCTGCTGCCAAGCCC-AAAGCCGCGGCCAAGCCGAAGGCGAAGCCCGCTGCT
rJMSF013I21+ AGGCCAAGGCTGCTGCCAAGCCC-AAAGCCGCGGCCAAGCCGAAGGCGAAGCCCGCTGCT
rJMFF012G22+ AGGCCAAGGCTGCTGCCAAGCCC-AAAGCCGCGGCCAAGCCGAAGGCGAAGCCCGCTGCT
rJMFF026I02+ AGGCCAAGGCTGCTGCCAAGCCC-AAAGCCGCGGCCAAGCCGAAGGCGAAGCCCGCTGCT
rJMFF032B05+ AGGCCAAGGCTGCTGCCAAGCCC-AAAGCCGCGGCCAAGCCGAAGGCGAAGCCCGCTGCT
rJMFF045D23+ AGGCCAAGGCTGCTGCCAAGCCC-AAAGCCGCGGCCAAGCCGAAGGCGAAGCCCGCTGCT
rJMFF024F13+ AGGCCAAGGCTGCTGCCAAGCCC-AAAGCCGCGGCCAAGCCGAAGGCGAAGCCCGCTGCT
rJMFF024O17+ AGGCCAAGGCTGCTGCCAAGCCC-AAAGCCGCGGCCAAGCCGAAGGCGAAGCCCGCTGCT
rJMFF043E20+ AGGCCAAGGCTGCTGCCAAGCCC-AAAGCCGCGGCCAAGCCGAAGGCGAAGCCCGCTGCT
rJMFF050I12+ AAGCCCGCTGCT
rJMFF044F16+ GCGGCCAAGCCGAAGGCGAAGCCCGCTGCT
                      ____________________________________________________________
consensus AGGCCAAGGCTGCTGCCAAGCCC-AAAGCCGCGGCCAAGCCGAAGGCGAAGCCCGCTGCT
 
. : . : . : . : . : . :
JMSF046D23- AAGGCTAATCC
JMFN016K09- AAGGCTAATCCAGCTCCAAAGGCGAAGGCTGTTGCCGCTAAGCCAAAGGCGGCTGCCGCT
rJMSF050O04+ AAGGCTAATCCAGCTCCAAAGGCGAAGGCTGTTGCCGCTAAGCCAAAGGCGGCTGCCGCT
JMFN014P13- AAGGCTAATCCAGCTCCAAAGGCGAAGGCTGTTGCCGCTAAGCCAAAGGCGGCTGCCGCT
JMFN039G03- AAGGCTAATCCAGCTCCAAAGGCGAAGGCTGTTGCCGCTAAGCCAAAGGCGGCTGCCGCT
rJMFF023G09+ AAGGCTAATCCAGCTCCAAAGGCGAAGGCTGTTGCCGCTAAGCCAAAGGCGGCTGCCGCT
rJMSF046D23+ AAGGCTAATCCAGCTCCAAAGGCGAAGGCTGTTGCCGCTAAGCCAAAGGCGGCTGCCGCT
rJMSF029H21+ AAGGCTAATCCAGCTCCAAAGGCGAAGGCTGTTGCCGCTAAGCCAAAGGCGGCTGCCGCT
rJMFF038G15+ AAGGCTAATCCAGCTCCAAAGGCGAAGGCTGTTGCCGCTAAGCCAAAGGCGGCTGCCGCT
rJMSF027I23+ AAGGCTAATCCAGCTCCAAAGGCGAAGGCTGTTGCCGCTAAGCCAAAGGCGGCTGCCGCT
rJMSF028L16+ AAGGCTAATCCAGCTCCAAAGGCGAAGGCTGTTGCCGCTAAGCCAAAGGCGGCTGCCGCT
rJMSF013I21+ AAGGCTAATCCAGCTCCAAAGGCGAAGGCTGTTGCCGCTAAGCCAAAGGCGGCTGCCGCT
rJMFF012G22+ AAGGCTAATCCAGCTCCAAAGGCGAAGGCTGTTGCCGCTAAGCCAAAGGCGGCTGCCGCT
rJMFF026I02+ AAGGCTAATCCAGCTCCAAAGGCGAAGGCTGTTGCCGCTAAGCCAAAGGCGGCTGCCGCT
rJMFF032B05+ AAGGCTAATCCAGCTCCAAAGGCGAAGGCTGTTGCCGCTAAGCCAAAGGCGGCTGCCGCT
rJMFF045D23+ AAGGCTAATCCAGCTCCAAAGGCGAAGGCTGTTGCCGCTAAGCCAAAGGCGGCTGCCGCT
rJMFF024F13+ AAGGCTAATCCAGCTCCAAAGGCGAAGGCTGTTGCCGCTAAGCCAAAGGCGGCTGCCGCT
rJMFF047J10+ AAGGCTAATCCAGCTCCAAAGGCGAAGGCTGTTGCCGCTAAGCCAAAGGCGGCTGCCGCT
rJMFF024O17+ AAGGCTAATCCAGCTCCAAAGGCGAAGGCTGTTGCCGCTAAGCCAAAGGCGGCTGCCGCT
rJMFF043E20+ AAGGCTAATCCAGCTCCAAAGGCGAAGGCTGTTGCCGCTAAGCCAAAGGCGGCTGCCGCT
rJMFF050I12+ AAGGCTAATCCAGCTCCAAAGGCGAAGGCTGTTGCCGCTAAGCCAAAGGCGGCTGCCGCT
rJMFF044F16+ AAGGCTAATCCAGCTCCAAAGGCGAAGGCTGTTGCCGCTAAGCCAAAGGCGGCTGCCGCT
                      ____________________________________________________________
consensus AAGGCTAATCCAGCTCCAAAGGCGAAGGCTGTTGCCGCTAAGCCAAAGGCGGCTGCCGCT
 
. : . : . : . : . : . :
JMFN016K09- AAGCCTAAGGCAGCTGCGAAGACTAAGGCTGCAGCCAAGCCAAAGAAGGAGCCGGCGGCT
rJMSF050O04+ AAGCCTAAGGCAGCTGCGAAGACTAAGGCTGCAGCCAAGCCAAAGAAGGAGCCGGCGGCT
JMFN014P13- AAGCCTAAGGCAGCTGCGAAGACTAAGGCTGCAGCCAAGCCAAAGAAGGAGCCGGCGGCT
JMFN039G03- AAGCCTAAGGCAGCTGCGAAGACTAAGGCTGCAGCCAAGCCAAAGAAGGAGCCGGCGGCT
rJMFF023G09+ AAGCCTAAGGCAGCTGCGAAGACTAAGGCTGCAGCCAAGCCAAAGAAGGAGCCGGCGGCT
rJMSF046D23+ AAGCCTAAGGCAGCTGCGAAGACTAAGGCTGCAGCCAAGCCAAAGAAGGAGCCGGCGGCT
rJMSF029H21+ AAGCCTAAGGCAGCTGCGAAGACTAAGGCTGCAGCCAAGCCAAAGAAGGAGCCGGCGGCT
rJMFF038G15+ AAGCCTAAGGCAGCTGCGAAGACTAAGGCTGCAGCCAAGCCAAAGAAGGAGCCGGCGGCT
rJMSF027I23+ AAGCCTAAGGCAGCTGCGAAGACTAAGGCTGCAGCCAAGCCAAAGAAGGAGCCGGCGGCT
rJMSF028L16+ AAGCCTAAGGCAGCTGCGAAGACTAAGGCTGCAGCCAAGCCAAAGAAGGAGCCGGCGGCT
rJMSF013I21+ AAGCCTAAGGCAGCTGCGAAGACTAAGGCTGCAGCCAAGCCAAAGAAGGAGCCGGCGGCT
rJMFF012G22+ AAGCCTAAGGCAGCTGCGAAGACTAAGGCTGCAGCCAAGCCAAAGAAGGAGCCGGCGGCT
rJMFF026I02+ AAGCCTAAGGCAGCTGCGAAGACTAAGGCTGCAGCCAAGCCAAAGAAGGAGCCGGCGGCT
rJMFF032B05+ AAGCCTAAGGCAGCTGCGAAGACTAAGGCTGCAGCCAAGCCAAAGAAGGAGCCGGCGGCT
rJMFF045D23+ AAGCCTAAGGCAGCTGCGAAGACTAAGGCTGCAGCCAAGCCAAAGAAGGAGCCGGCGGCT
rJMFF014P19+ CCAAAGNAGGANCCGGCGGCT
rJMFF024F13+ AAGCCTAAGGCAGCTGCGAAGACTAAGGCTGCAGCCAAGCCAAAGAAGGAGCCGGCGGCT
rJMFF047J10+ AAGCCTAAGGCAGCTGCGAAGACTAAGGCTGCAGCCAAGCCAAAGAAGGAGCCGGCGGCT
rJMFF024O17+ AAGCCTAAGGCAGCTGCGAAGACTAAGGCTGCAGCCAAGCCAAAGAAGGAGCCGGCGGCT
rJMFF043E20+ AAGCCTAAGGCAGCTGCGAAGACTAAGGCTGCAGCCAAGCCAAAGAAGGAGCCGGCGGCT
rJMFF050I12+ AAGCCTAAGGCAGCTGCGAAGACTAAGGCTGCAGCCAAGCCAAAGAAGGAGCCGGCGGCT
rJMFF044F16+ AAGCCTAAGGCAGCTGCGAAGACTAAGGCTGCAGCCAAGCCAAAGAAGGAGCCGGCGGCT
                      ____________________________________________________________
consensus AAGCCTAAGGCAGCTGCGAAGACTAAGGCTGCAGCCAAGCCAAAGAAGGAGCCGGCGGCT
 
. : . : . : . : . : . :
JMFN016K09- AAGGTTGCCAGGACGGCCACCCGATCAACCCCGAGAGGCAAGGCTCCTCCTGCCAAGGCT
rJMSF050O04+ AAGGTTGCCAGGACGGCCACCCGATCAACCCCGAGAGGCAAGGCTCCTCCTGCCAAGGCT
JMFN014P13- AAGGTTGCCAGGACGGCCACCCGATCAACCCCGAGAGGCAAGGCTCCTCCTGCCAAGGCT
JMFN039G03- AAGGTTGCCAGGACGGCCACCCGATCAACCCCGAGAGGCAAGGCTCCTCCTGCCAAGGCT
rJMFF023G09+ AAGGTTGCCAGGACGGCCACCCGATCAACCCCGAGAGGCAAGGCTCCTCCTGCCAAGGCT
rJMSF046D23+ AAGGTTGCCAGGACGGCCACCCGATCAACCCCGAGAGGCAAGGCTCCTCCTGCCAAGGCT
rJMSF029H21+ AAGGTTGCCAGGACGGCCACCCGATCAACCCCGAGAGGCAAGGCTCCTCCTGCCAAGGCT
rJMFF038G15+ AAGGTTGCCAGGACGGCCACCCGATCAACCCCGAGAGGCAAGGCTCCTCCTGCCAAGGCT
rJMSF027I23+ AAGGTTGCCAGGACGGCCACCCGATCAACCCCGAGAGGCAAGGCTCCTCCTGCCAAGGCT
rJMSF028L16+ AAGGTTGCCAGGACGGCCACCCGATCAACCCCGAGAGGCAAGGCTCCTCCTGCCAAGGCT
rJMSF013I21+ AAGGTTGCCAGGACGGCCACCCGATCAACCCCGAGAGGCAAGGCTCCTCCTGCCAAGGCT
rJMFF012G22+ AAGGTTGCCAGGACGGCCACCCGATCAACCCCGAGAGGCAAGGCTCCTCCTGCCAAGGCT
rJMFF026I02+ AAGGTTGCCAGGACGGCCACCCGATCAACCCCGAGAGGCAAGGCTCCTCCTGCCAAGGCT
rJMFF032B05+ AAGGTTGCCAGGACGGCCACCCGATCAACCCCGAGAGGCAAGGCTCCTCCTGCCAAGGCT
rJMFF045D23+ AAGGTTGCCAGGACGGCCACCCGATCAACCCCGAGAGGCAAGGCTCCTCCTGCCAAGGCT
rJMFF014P19+ AAGGTTGCCAGGACGGCCACCCGATCAACCCCGAGAGGCAAGGCTCCTCCTNCCAAGGCT
rJMFF024F13+ AAGGTTGCCAGGACGGCCACCCGATCAACCCCGAGAGGCAAGGCTCCTCCTGCCAAGGCT
rJMFF047J10+ AAGGTTGCCAGGACGGCCACCCGATCAACCCCGAGAGGCAAGGCTCCTCCTGCCAAGGCT
rJMFF024O17+ AAGGTTGCCAGGACGGCCACCCGATCAACCCCGAGAGGCAAGGCTCCTCCTGCCAAGGCT
rJMFF043E20+ AAGGTTGCCAGGACGGCCACCCGATCAACCCCGAGAGGCAAGGCTCCTCCTGCCAAGGCT
rJMFF050I12+ AAGGTTGCCAGGACGGCCACCCGATCAACCCCGAGAGGCAAGGCTCCTCCTGCCAAGGCT
rJMFF044F16+ AAGGTTGCCAGGACGGCCACCCGATCAACCCCGAGAGGCAAGGCTCCTCCTGCCAAGGCT
                      ____________________________________________________________
consensus AAGGTTGCCAGGACGGCCACCCGATCAACCCCGAGAGGCAAGGCTCCTCCTGCCAAGGCT
 
. : . : . : . : . : . :
JMFN016K09- GCGGCGAAGAAGGCTACTCCTGTGAAGAAGGCTCNCGCTAAGGGCGTGAAGCCCAAGTCC
rJMSF050O04+ GCGGCGAAGAAGGCTACTCCTGTGAAGAAGGCTCCGGCTAAGGGCGTGAAGCCCAAGTCC
JMFN014P13- GCGGCGAAGAAGGCTACTCCTGTGAAGAAGGCTCCGGCTAAGGGCGTGAAGCCCAAGTCC
JMFN039G03- GCGGCGAAGAAGGCTACTCCTGTGAAGAAGGCTCCGGCTAAGGGCGTGAAGCCCAAGTCC
rJMFF023G09+ GCGGCGAAGAAGGCTACTCCTGTGAAGAAGGCTCCGGCTAAGGGCGTGAAGCCCAAGTCC
rJMSF046D23+ GCGGCGAAGAAGGCTACTCCTGTGAAGAAGGCTCCGGCTAAGGGCGTGAAGCCCAAGTCC
rJMSF029H21+ GCGGCGAAGAAGGCTACTCCTGTGAAGAAGGCTCCGGCTAAGGGCGTGAAGCCCAAGTCC
rJMFF038G15+ GCGGCGAAGAAGGCTACTCCTGTGAAGAAGGCTCCGGCTAAGGGCGTGAAGCCCAAGTCC
rJMSF027I23+ GCGGCGAAGAAGGCTACTCCTGTGAAGAAGGCTCCGGCTAAGGGCGTGAAGCCCAAGTCC
rJMSF028L16+ GCGGCGAAGAAGGCTACTCCTGTGAAGAAGGCTCCGGCTAAGGGCGTGAAGCCCAAGTCC
rJMSF013I21+ GCGGCGAAGAAGGCTACTCCTGTGAAGAAGGCTCCGGCTAAGGGCGTGAAGCCCAAGTCC
rJMFF012G22+ GCGGCGAAGAAGGCTACTCCTGTGAAGAAGGCTCCGGCTAAGGGCGTGAAGCCCAAGTCC
rJMFF026I02+ GCGGCGAAGAAGGCTACTCCTGTGAAGAAGGCTCCGGCTAAGGGCGTGAAGCCCAAGTCC
rJMFF032B05+ GCGGCGAAGAAGGCTACTCCTGTGAAGAAGGCTCCGGCTAAGGGCGTGAAGCCCAAGTCC
rJMFF045D23+ GCGGCGAAGAAGGCTACTCCTGTGAAGAAGGCTCCGGCTAAGGGCGTGAAGCCCAAGTCC
rJMFF014P19+ GCGGCGAAGAAGGCTNCTCCTGTGAAGAAGGCTCCGGNTAAGGGCGTGAAGCCCAAGTCC
rJMFF024F13+ GCGGCGAAGAAGGCTACTCCTGTGAAGAAGGCTCCGGCTAAGGGCGTGAAGCCCAAGTCC
rJMFF047J10+ GCGGCGAAGAAGGCTACTCCTGTGAAGAAGGCTCCGGCTAAGGGCGTGAAGCCCAAGTCC
rJMFF024O17+ GCGGCGAAGAAGGCTACTCCTGTGAAGAAGGCTCCGGCTAAGGGCGTGAAGCCCAAGTCC
rJMFF043E20+ GCGGCGAAGAAGGCTACTCCTGTGAAGAAGGCTCCGGCTAAGGGCGTGAAGCCCAAGTCC
rJMFF050I12+ GCGGCGAAGAAGGCTACTCCTGTGAAGAAGGCTCCGGCTAAGGGCGTGAAGCCCAAGTCC
rJMFF044F16+ GCGGCGAAGAAGGCTACTCCTGTGAAGAAGGCTCCGGCTAAGGGCGTGAAGCCCAAGTCC
                      ____________________________________________________________
consensus GCGGCGAAGAAGGCTACTCCTGTGAAGAAGGCTCCGGCTAAGGGCGTGAAGCCCAAGTCC
 
. : . : . : . : . : . :
JMFN016K09- GTCAA
rJMSF050O04+ GTCAAGTCGCCGGTGAAGAAAGCGACGGCGAGGAAGGGGAGGAAATGATGTGGAAGCTGG
JMFN014P13- GTCAAGTCGCCGGTGAAGAAAGCGACGGCGAGGAAGGGGAGGAAGTGATGTGGAAGCTGG
JMFN039G03- GTCAAGTCGCCGGTGAAGAAAGCGACGGCGAGGAAGGGGAGGAAGTGATGTGGAAGCTGG
rJMFF023G09+ GTCAAGTCGCCGGTGAAGAAAGCGACGGCGAGGAAGGGGAGGAAGTGATGTGGAAGCTGG
rJMSF046D23+ GTCAAGTCGCCGGTGAAGAAAGCGACGGCGAGGAAGGGGAGGAAGTGATGTGGAAGCTGG
rJMSF029H21+ GTCAAGTCGCCGGTGAAGAAAGCGACGGCGAGGAAGGGGAGGAAGTGATGTGGAAGCTGG
rJMFF038G15+ GTCAAGTCGCCGGTGAAGAAAGCGACGGCGAGGAAGGGGAGGAAGTGATGTGGAAGCTGG
rJMSF027I23+ GTCAAGTCGCCGGTGAAGAAAGCGACGGCGAGGAAGGGGAGGAAGTGATGTGGAAGCTGG
rJMSF028L16+ GTCAAGTCGCCGGTGAAGAAAGCGACGGCGAGGAAGGGGAGGAAGTGATGTGGAAGCTGG
rJMSF013I21+ GTCAAGTCGCCGGTGAAGAAAGCGACGGCGAGGAAGGGGAGGAAGTGATGTGGAAGCTGG
rJMFF012G22+ GTCAAGTCGCCGGTGAAGAAAGCGACGGCGAGGAAGGGGAGGAAGTGATGTGGAAGCTGG
rJMFF026I02+ GTCAAGTCGCCGGTGAAGAAAGCGACGGCGAGGAAGGGGAGGAAGTGATGTGGAAGCTGG
rJMFF032B05+ GTCAAGTCGCCGGTGAAGAAAGCGACGGCGAGGAAGGGGAGGAAGTGATGTGGAAGCTGG
rJMFF045D23+ GTCAAGTCGCCGGTGAAGAAAGCGACGGCGAGGAAGGGGAGGAAGTGATGTGGAAGCTGG
rJMFF014P19+ GTCAAGTCGCCGGTGAAGAAAGCGACGGCGAGGAAGGGGAGGAAGTGATGTGGAAGCTGG
rJMFF024F13+ GTCAAGTCGCCGGTGAAGAAAGCGACGGCGAGGAAGGGGAGGAAGTGATGTGGAAGCTGG
rJMFF047J10+ GTCAAGTCGCCGGTGAAGAAAGCGACGGCGAGGAAGGGGAGGAAGTGATGTGGAAGCTGG
rJMFF024O17+ GTCAAGTCGCCGGTGAAGAAAGCGACGGCGAGGAAGGGGAGGAAGTGATGTGGAAGCTGG
rJMFF043E20+ GTCAAGTCGCCGGTGAAGAAAGCGACGGCGAGGAAGGGGAGGAAGTGATGTGGAAGCTGG
rJMFF050I12+ GTCAAGTCGCCGGTGAAGAAAGCGACGGCGAGGAAGGGGAGGAAGTGATGTGGAAGCTGG
rJMFF044F16+ GTCAAGTCGCCGGTGAAGAAAGCGACGGCGAGGAAGGGGAGGAAGTGATGTGGAAGCTGG
                      ____________________________________________________________
consensus GTCAAGTCGCCGGTGAAGAAAGCGACGGCGAGGAAGGGGAGGAAGTGATGTGGAAGCTGG
 
. : . : . : . : . : . :
rJMSF050O04+ TAGATAGATAGGGTGGGGGGATCAGGTTTTGATTTAGGGGTACTCTTGTAAATTTCCCTA
JMFN014P13- TAGATAGATAGGGTGGGGGGATCAGGTTTTGATTTAGGGGTACTCTTGTAAATTTCCCTA
JMFN039G03- TAGATAGATAGGGTGGGGGGATCAGGTTTTGATTTAGGGGTACTCTTGTAAATTTCCCTA
rJMFF023G09+ TAGATAGATAGGGTGGGGGGATCAGGTTTTGATTTAGGGGTACTCTTGTAAATTTCCCTA
rJMSF046D23+ TAGATAGATAGGGTGGGGGGATCAGGTTTTGATTTAGGGGTACTCTTGTAAATTTCCCTA
rJMSF029H21+ TAGATAGATAGGGTGGGGGGATCAGGTTTTGATTTAGGGGTACTCTTGTAAATTTCCCTA
rJMFF038G15+ TAGATAGATAGGGTGGGGGGATCAGGTTTTGATTTAGGGGTACTCTTGTAAATTTCCCTA
rJMSF027I23+ TAGATAGATAGGGTGGGGGGATCAGGTTTTGATTTAGGGGTACTCTTGTAAATTTCCCTA
rJMSF028L16+ TAGATAGATAGGGTGGGGGGATCAGGTTTTGATTTAGGGGTACTCTTGTAAATTTCCCTA
rJMSF013I21+ TAGATAGATAGGGTGGGGGGATCAGGTTTTGATTTAGGGGTACTCTTGTAAATTTCCCTA
rJMFF012G22+ TAGATAGATAGGGTGGGGGGATCAGGTTTTGATTTAGGGGTACTCTTGTAAATTTCCCTA
rJMFF026I02+ TAGATAGATAGGGTGGGGGGATCAGGTTTTGATTTAGGGGTACTCTTGTAAATTTCCCTA
rJMFF032B05+ TAGATAGATAGGGTGGGGGGATCAGGTTTTGATTTAGGGGTACTCTTGTAAATTTCCCTA
rJMFF045D23+ TAGATAGATAGGGTGGGGGGATCAGGTTTTGATTTAGGGGTACTCTTGTAAATTTCCCTA
rJMFF014P19+ TAGATAGATAGGGTGGGGGGATCAGGTTTTGATTTAGGGGTACTCTTGTAAATTTCCCTA
rJMFF024F13+ TAGATAGATAGGGTGGGGGGATCAGGTTTTGATTTAGGGGTACTCTTGTAAATTTCCCTA
rJMFF047J10+ TAGATAGATAGGGTGGGGGGATCAGGTTTTGATTTAGGGGTACTCTTGTAAATTTCCCTA
rJMFF024O17+ TAGATAGATAGGGTGGGGGGATCAGGTTTTGATTTAGGGGTACTCTTGTAAATTTCCCTA
rJMFF043E20+ TAGATAGATAGGGTGGGGGGATCAGGTTTTGATTTAGGGGTACTCTTGTAAATTTCCCTA
rJMFF050I12+ TAGATAGATAGGGTGGGGGGATCAGGTTTTGATTTAGGGGTACTCTTGTAAATTTCCCTA
rJMFF044F16+ TAGATAGATAGGGTGGGGGGATCAGGTTTTGATTTAGGGGTACTCTTGTAAATTTCCCTA
                      ____________________________________________________________
consensus TAGATAGATAGGGTGGGGGGATCAGGTTTTGATTTAGGGGTACTCTTGTAAATTTCCCTA
 
. : . : . : . : . : . :
rJMSF050O04+ ATCG
JMFN014P13- ATCGTTATGGGTTAATCTGGTTCGAGAACCAGAATTCTTTTTCCGCCAATCGTTATTTTT
JMFN039G03- ATCGTTATGGGTTAATCTGGTTCGAGAACCAGAATTCTTTTTCCGCCAATCGTTATTTTT
rJMFF023G09+ ATCGTTATGGGTTAATCTGGTTCGAGAACCAGAATTCTTTTTCCGCCAATCGTTATTTTT
rJMSF046D23+ ATCGTTATGGGTTAATCTGGTTCGAGAACCAGAATTCTTTTTCCGCCAATCGTTATTTTT
rJMSF029H21+ ATCGTTATGGGTTAATCTGGTTCGAGAACCAGAATTCTTTTTCCGCCAATCGTTATTTTT
rJMFF038G15+ ATCGTTATGGGTTAATCTGGTTCGAGAACCAGAATTCTTTTTCCGCCAATCGTTATTTTT
rJMSF027I23+ ATCGTTATGGGTTAATCTGGTTCGAGAACCAGAATTCTTTTTCCGCCAATCGTTATTTTT
rJMSF028L16+ ATCGTTATGGGTTAATCTGGTTCGAGAACCAGAATTCTTTTTCCGCCAATCGTTATTTTT
rJMSF013I21+ ATCGTTATGGGTTAATCTGGTTCGAGAACCAGAATTCTTTTTCCGCCAATCGTTATTTTT
rJMFF012G22+ ATCGTTATGGGTTAATCTGGTTCGAGAACCAGAATTCTTTTTCCGCCAATCGTTATTTTT
rJMFF026I02+ ATCGTTATGGGTTAATCTGGTTCGAGAACCAGAATTCTTTTTCCGCCAATCGTTATTTTT
rJMFF032B05+ ATCGTTATGGGTTAATCTGGTTCGAGAACCAGAATTCTTTTTCCGCCAATCGTTATTTTT
rJMFF045D23+ ATCGTTATGGGTTAATCTGGTTCGAGAACCAGAATTCTTTTTCCGCCAATCGTTATTTTT
rJMFF014P19+ ATCGTTATGGGTTAATCTGGTTCGAGAACCAGAATTCTTTTTCCGCCAATCGTTATTTTT
rJMFF024F13+ ATCGTTATGGGTTAATCTGGTTCGAGAACCAGAATTCTTTTTCCGCCAATCGTTATTTTT
rJMFF047J10+ ATCGTTATGGGTTAATCTGGTTCGAGAACCAGAATTCTTTTTCCGCCAATCGTTATTTTT
rJMFF024O17+ ATCGTTATGGGTTAATCTGGTTCGAGAACCAGAATTCTTTTTCCGCCAATCGTTATTTTT
rJMFF043E20+ ATCGTTATGGGTTAATCTGGTTCGAGAACCAGAATTCTTTTTCCGCCAATCGTTATTTTT
rJMFF050I12+ ATCGTTATGGGTTAATCTGGTTCGAGAACCAGAATTCTTTTTCCGCCAATCGTTATTTTT
rJMFF044F16+ ATCGTTATGGGTTAATCTGGTTCGAGAACCAGAATTCTTTTTCCGCCAATCGTTATTTTT
                      ____________________________________________________________
consensus ATCGTTATGGGTTAATCTGGTTCGAGAACCAGAATTCTTTTTCCGCCAATCGTTATTTTT
 
. : . : . : . : . : . :
JMFN014P13- CTCA
JMFN039G03- CTCACCAGCTCTTCTCC
rJMFF023G09+ CTCACCAGCTCTTCTCCACCATTGTAAGGATTCAAAGCAATT
rJMSF046D23+ CTCACCAGCTCTTCTCCACCATTGTAAGGATTCAAAGCAATTC
rJMSF029H21+ CTCACCAGCTCTTCTCCACCATTGTAAGGATTCAAAGCAATTCTA
rJMFF038G15+ CTCACCAGCTCTTCTCCACCATTGTAAGGATTCAAAGCAATTCTAGCTTCAA
rJMSF027I23+ CTCACCAGCTCTTCTCCACCATTGTAAGGATTCAAAGCAATTCTA
rJMSF028L16+ CTCACCAGCTCTTCTCCACCATTGTAAGGATTCAAAGCAATTCTAGC
rJMSF013I21+ CTCACCAGCTCTTCTCCACCATTGTAAGGATTCAAAGCAATTCTAGCT
rJMFF012G22+ CTCACCAGCTCTTCTCCACCATTGTAAGGATTCAAAGCAATTCTAGCTTCAA
rJMFF026I02+ CTCACCAGCTCTTCTCCACCATTGTAAGGATTCAAAGCAATTCTAGCTTCAATGTAGTTC
rJMFF032B05+ CTCACCAGCTCTTCTCCACCATTGTAAGGATTCAAAGCAATTCTAGCTTCAATGTAGTTC
rJMFF045D23+ CTCACCAGCTCTTCTCCACCATTGTAAGGATTCAAAGCAATTCTAGCTTCAATGTAGTTC
rJMFF014P19+ CTCACCAGCTCTTCTCCACCATTGTAAGGATTCAAAGCAATTCTAGC
rJMFF024F13+ CTCACCAGCTCTTCTCCACCATTGTAAGGATTCAAAGCAATTCTAGCTTCAATGTAGTTC
rJMFF047J10+ CTCACCAGCTCTTCTCCACCATTGTAAGGATTCAAAGCAATTCTAGCTTCAATGTAGTTC
rJMFF024O17+ CTCACCAGCTCTTCTCCACCATTGTAAGGATTCAAAGCAATTCTAGCTTCAATGTAGTTC
rJMFF043E20+ CTCACCAGCTCTTCTCCACCATTGTAAGGATTCAAAGCAATTCTAGCTTCAATGTAGTTC
rJMFF050I12+ CTCACCAGCTCTTCTCCACCATTGTAAGGATTCAAAGCAATTCTAGCTTCAATGTAGTTC
rJMFF044F16+ CTCACCAGCTCTTCTCCACCATTGTAAGGATTCAAAGCAATTCTAGCTTCAATGTAGTTC
                      ____________________________________________________________
consensus CTCACCAGCTCTTCTCCACCATTGTAAGGATTCAAAGCAATTCTAGCTTCAATGTAGTTC
 
. : . : . : . : . : . :
rJMFF026I02+ TTCATATACC
rJMFF032B05+ TTCATATACC
rJMFF045D23+ TTCATATACCA
rJMFF024F13+ TTCATATACCAG
rJMFF047J10+ TTCATATACCAG
rJMFF024O17+ TTCATATACCAGT
rJMFF043E20+ TTCATATACCAGTGATATCAAAATTTCCTTTTCC
rJMFF050I12+ TTCATATACCAGTGATATCAAAATTTCCTTTTCC
rJMFF044F16+ TTCATATACCAGTGATATCAAAATTTCCTTTTCCAAAAAAAAAAAAAAACTCTCCAGGGT
                      ____________________________________________________________
consensus TTCATATACCAGTGATATCAAAATTTCCTTTTCCAAAAAAAAAAAAAAACTCTCCAGGGT