Contig 002672:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF043F02Sequence647013316 (14)ref|XP_006484012.1|115PREDICTED: uncharacterized protein LOC102608643 [Citrus sinensis] gb|KDO82080.1|623002672 (5)ref|XP_009773420.1|6e-70PREDICTED: imidazoleglycerol-phosphate dehydratase [Nicotiana sylvestris] ref|X
JMFF047O10Sequence433002672 (5)ref|XP_009591437.1|5e-27PREDICTED: imidazoleglycerol-phosphate dehydratase [Nicotiana tomentosiformis] 317002672 (5)ref|XP_006360797.1|2e-11PREDICTED: imidazoleglycerol-phosphate dehydratase-like isoform X1 [Solanum tub
JMSF041J05Sequence750002672 (5)ref|XP_009591437.1|1e-121PREDICTED: imidazoleglycerol-phosphate dehydratase [Nicotiana tomentosiformis] 525002672 (5)ref|XP_009773420.1|6e-82PREDICTED: imidazoleglycerol-phosphate dehydratase [Nicotiana sylvestris] ref|X

Alignment

This contig is upended


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JMFF047O10-                                         CCGGGTTCTTCCACTTCTAACTCCAATCGG
                      ____________________________________________________________
consensus                                           CCGGGTTCTTCCACTTCTAACTCCAATCGG
 
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JMFF047O10-           CGCTGAGCCGGCAGCCTCTTCTCTCTTTCTCCACAAATGGAGCATTCTGTTTGTCATCGT
JMSF041J05-                                            CAAATGGAGCATTCTGTTTGTCATCGT
                      ____________________________________________________________
consensus             CGCTGAGCCGGCAGCCTCTTCTCTCTTTCTCCACAAATGGAGCATTCTGTTTGTCATCGT
 
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JMFF047O10-           CGTCTTCTCAACTCTCCGTCTTCACCATCACTGATCGTCTCTCGTCTCCACCCTACAAAG
JMSF041J05-           CGTCTTCTCAACTCTCCGTCTTCACCATCACTGATCGTTTCTCGTCTCCACCCTACAAAG
                      ____________________________________________________________
consensus             CGTCTTCTCAACTCTCCGTCTTCACCATCACTGATCGTTTCTCGTCTCCACCCTACAAAG
 
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JMFF047O10-           CTTACTTTCCTGCATCCAACAATTACACAGCGTAAAGTACAACTCATGGCTGCACAACCC
JMSF041J05-           CTTACTTTCCTGCATCCAACAATTACACAGCGTAAAGTACAACTCATGGCTGCACAACCC
                      ____________________________________________________________
consensus             CTTACTTTCCTGCATCCAACAATTACACAGCGTAAAGTACAACTCATGGCTGCACAACCC
 
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JMFF047O10-           CACAGTCTCTCTGCTACTCAAGTGGGACCTCTTCGTGCCTTCGATAATGGCTCCCCGGCA
JMSF041J05-           CACAGTCTCTCTGCTACTCAAGTGGGACCTCTTCGTGCCTTCGATAATGGCTCCCCGGCA
                      ____________________________________________________________
consensus             CACAGTCTCTCTGCTACTCAAGTGGGACCTCTTCGTGCCTTCGATAATGGCTCCCCGGCA
 
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JMFF047O10-           GTGACTTCCGAAACCCAGACCGGTCGAATTGGAGAGGTGAAGAGAGTGACGAAAGAGACT
JMSF041J05-           GTGACTTCCGAAACCCAGACCGGTCGAATTGGAGAGGTGAAGAGAGTGACGAAAGAGACT
                      ____________________________________________________________
consensus             GTGACTTCCGAAACCCAGACCGGTCGAATTGGAGAGGTGAAGAGAGTGACGAAAGAGACT
 
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JMFF047O10-           AATGTATTTGTGAAGATAAACTTGGATGGAACGGGTGTGGCTGAGAACTCTACGGGCATT
JMSF041J05-           AATGTATTTGTGAAGATAAACTTGGATGGAACGGGTGTGGCTGAGAACTCTACGGGCATT
                      ____________________________________________________________
consensus             AATGTATTTGTGAAGATAAACTTGGATGGAACGGGTGTGGCTGAGAACTCTACGGGCATT
 
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JMFF047O10-           CCATTTCTTGATCATATGTTGGATCAACTTGCACCCCATGGGT                 
JMSF041J05-           CCATTTCTTGATCATATGTTGGATCAACTTGCATCCCATGGGTTGTTCGATGTGCATGTG
                      ____________________________________________________________
consensus             CCATTTCTTGATCATATGTTGGATCAACTTGCATCCCATGGGTTGTTCGATGTGCATGTG
 
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JMSF041J05-           AAGGCTACAGGGGACGTTCACATTGATGATCATCACACAAATGAAGATGTTGGCCTTGCC
rJMSF041J05+                                                      AGATGTTGGCCTTGCC
                      ____________________________________________________________
consensus             AAGGCTACAGGGGACGTTCACATTGATGATCATCACACAAATGAAGATGTTGGCCTTGCC
 
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JMSF041J05-           ATTGGAACAGCGTTGTTGCAAGCACTTGGCGATAGAAAGGGAATCAATCGGTTTGGTGAC
rJMSF041J05+          ATTGGAACAGCGTTGTTGCAAGCACTTGGCGATAGAAAGGGAATCAATCGGTTTGGTGAC
rJMFF043F02+                                              AAGGGAATCAATCGGTTTGGTGAC
                      ____________________________________________________________
consensus             ATTGGAACAGCGTTGTTGCAAGCACTTGGCGATAGAAAGGGAATCAATCGGTTTGGTGAC
 
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JMSF041J05-           TTCTCAGCTCCCCTGGATGAATCGCTGATTCATGTTGCATTGGATTTATCTGGAAGGCCG
rJMSF041J05+          TTCTCAGCTCCCCTGGATGAATCGCTGATTCATGTTGCATTGGATTTATCTGGAAGGCCG
rJMFF043F02+          TTCTCAGCTCCCCTGGATGAATCGCTGATTCATGTTGCATTGGATTTATCTGGAAGGCCG
                      ____________________________________________________________
consensus             TTCTCAGCTCCCCTGGATGAATCGCTGATTCATGTTGCATTGGATTTATCTGGAAGGCCG
 
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JMSF041J05-           CATTTAGGTTTTGATTTACAAATACCGACTCAGAGAGTGGGAACGTATGACACTCAGCTG
rJMSF041J05+          CATTTAGGTTTTGATTTACAAATACCGACTCAGAGAGTGGGAACGTATGACACTCAGCTG
rJMFF043F02+          CATTTAGGTTTTGATTTACAAATACCGACTCAGAGAGTGGGAACGTATGACACTCAGCTG
                      ____________________________________________________________
consensus             CATTTAGGTTTTGATTTACAAATACCGACTCAGAGAGTGGGAACGTATGACACTCAGCTG
 
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JMSF041J05-           GTGGAACACTTCTTCCAGTCGATGGTCAACACTTCTGGAATGACGCTTCATATACGACAG
rJMSF041J05+          GTGGAACACTTCTTCCAGTCGATGGTCAACACTTCTGGAATGACGCTTCATATACGACAG
rJMFF043F02+          GTGGAACACTTCTTCCAGTCGATGGTCAACACTTCTGGAATGACGCTTCATATACGACAG
                      ____________________________________________________________
consensus             GTGGAACACTTCTTCCAGTCGATGGTCAACACTTCTGGAATGACGCTTCATATACGACAG
 
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JMSF041J05-           CTTGCCGGAAAAAATTCTCATCACATTATCGAGGCAACCTTCAAGGCGTTTGCACGAGCC
rJMSF041J05+          CTTGCCGGAAAAAATTCTCATCACATTATCGAGGCAACCTTCAAGGCGTTTGCACGAGCC
rJMFF047O10+                                              ACCTTCAAGGCGTTTGCACGAGCC
rJMFF043F02+          CTTGCCGGAAAAAATTCTCATCACATTATCGAGGCAACCTTCAAGGCGTTTGCACGAGCC
                      ____________________________________________________________
consensus             CTTGCCGGAAAAAATTCTCATCACATTATCGAGGCAACCTTCAAGGCGTTTGCACGAGCC
 
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JMSF041J05-           C                                                           
rJMSF041J05+          CTTAGACAAGCAACTGAGTATGACTTGCGTCGTGGTGGAAGTATACCAAGCTCAAAGGGG
rJMFF047O10+          CTTAGACAAGCAACTGAGTATGACTTGCGTCGTGGTGGAAGTATACCAAGCTCAAAGGGG
rJMFF043F02+          CTTAGACAAGCAACTGAGTATGACTTGCGTCGTGGTGGAAGTATACCAAGCTCAAAGGGG
                      ____________________________________________________________
consensus             CTTAGACAAGCAACTGAGTATGACTTGCGTCGTGGTGGAAGTATACCAAGCTCAAAGGGG
 
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rJMSF041J05+          GTTCTTTCACGTGCCTGAAGTATCGAAATTTGACAAAATGAGGGTGTTACAGTCGGAGAC
rJMFF047O10+          GTTCTTTCACGTGCCTGAAGTATCGAAATTTGACAAAATGAGGGTGTTACAGTCGGAGAC
rJMFF043F02+          GTTCTTTCACGTGCCTGAAGTATCGAAATTTGACAAAATGAGGGTGTTACAGTCGGAGAC
                      ____________________________________________________________
consensus             GTTCTTTCACGTGCCTGAAGTATCGAAATTTGACAAAATGAGGGTGTTACAGTCGGAGAC
 
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rJMSF041J05+          TTTTGTTCCGCAAACAGAACTATGATTCTCTTGCTGATGTATGAACACACTTCATTTCTA
rJMFF047O10+          TTTTGTTCCGCAAACAG-ACTATGATTCTCTTGCTGATGTATGAACACACTTCATTTCTA
rJMFF043F02+          TTTTGTTCCGCAAACAG-ACTATGATTCTCTTGCTGATGTATGAACACACTTCATTTCTA
                      ____________________________________________________________
consensus             TTTTGTTCCGCAAACAG-ACTATGATTCTCTTGCTGATGTATGAACACACTTCATTTCTA
 
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rJMSF041J05+          TGATTTCAACATTTTTTTTTATCAGAACT                               
rJMFF047O10+          TGATTTCAACATTTTTTTTTATCAGAACTTGTGAGCACTGTAGAAGTTGTAAGGATTAAC
rJMFF043F02+          TGATTTCAACATTTTTTTTTATCAGAACTTGTGAGCACTGTAGAAGTTGTAAGGATTAAC
                      ____________________________________________________________
consensus             TGATTTCAACATTTTTTTTTATCAGAACTTGTGAGCACTGTAGAAGTTGTAAGGATTAAC
 
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rJMFF047O10+          ATTGTATAAAAGTTACCAAAAGTGTTTTCTAGTTTTTCTCAATAAAGCAATATG      
rJMFF043F02+          ATTGTATAAAAGTTACCAAAAGTGTTTTTTAGTTTTTCTCAATAAAGCAATATGTACTTT
                      ____________________________________________________________
consensus             ATTGTATAAAAGTTACCAAAAGTGTTTTTTAGTTTTTCTCAATAAAGCAATATGTACTTT
 
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rJMFF043F02+          GAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXCTCGCCAGGGTGATCCGCCATAAGGGCC
                      ____________________________________________________________
consensus             GAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCGCCAGGGTGATCCGCCATAAGGGCC