Contig 002667:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF007I03Sequence560012869 (6)emb|CDP17569.1|4e-12unnamed protein product [Coffea canephora]822002667 (6)ref|XP_009623333.1|308PREDICTED: uncharacterized protein LOC104114563 [Nicotiana tomentosiformis]
JMFF013H12Sequence561012869 (6)emb|CDP17569.1|1e-12unnamed protein product [Coffea canephora]794002667 (6)ref|XP_009791364.1|315PREDICTED: uncharacterized protein LOC104238644 [Nicotiana sylvestris]
JMFF018G15Sequence576012869 (6)795002667 (6)ref|XP_009623333.1|383PREDICTED: uncharacterized protein LOC104114563 [Nicotiana tomentosiformis]
JMFF024P23Sequence483012869 (6)795002667 (6)ref|XP_009623333.1|382PREDICTED: uncharacterized protein LOC104114563 [Nicotiana tomentosiformis]
JMFF042I08Sequence652012869 (6)emb|CDP17569.1|5e-25unnamed protein product [Coffea canephora]600002667 (6)ref|XP_009791364.1|246PREDICTED: uncharacterized protein LOC104238644 [Nicotiana sylvestris]
JMFN036L14Sequence552002667 (6)ref|XP_009791364.1|236PREDICTED: uncharacterized protein LOC104238644 [Nicotiana sylvestris]

Alignment

This contig is upended


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rJMFF013H12+                                                     GAAATACAAGAGCACGA
rJMFF018G15+                                                     GAAAGACAAGAGCACGA
rJMFF007I03+             AGAAAGGTGGCTGGCTATAAAGTCACGCCAATGCAGNTGAGAAATACAAGAGCACGA
rJMFF024P23+                                                     GAAAGACAAGAGCACGA
                      ____________________________________________________________
consensus                AGAAAGGTGGCTGGCTATAAAGTCACGCCAATGCAGNTGAGAAATACAAGAGCACGA
 
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rJMFF013H12+          TAATATGGCGACAATTCGATG-CCCCCGAGCCCGAAAACTATTGGTATAGAGTCTGCGAA
rJMFF018G15+          TAATATGGCGACAATTCGATG-CCCCCGAGCCCGAAAGCTATTGGTATAGAGTCTGCGAA
rJMFF007I03+          TAATATGGCGACAATTCGATGCCCCCCGAGCCCGAAAACTATTGGTATAGAGTCTGCGAA
rJMFF024P23+          TAATATGGCGACAATTCGATG-CCCCCGAGCCCGAAAACTATTGGTATAGAGTCTGCGAA
                      ____________________________________________________________
consensus             TAATATGGCGACAATTCGATG-CCCCCGAGCCCGAAAACTATTGGTATAGAGTCTGCGAA
 
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rJMFF013H12+          GGTCCCTCCGCAAAGTACATCCATAGACCCGTGGCACGCATTGTGGAAATCTAAACGATT
rJMFF018G15+          GGTCCCTCCGCAAAGTACATCCATAGA-CCGTGGCACGCATTGTGGAAATCTAAACGATT
rJMFF007I03+          GGTCCCTCCGCAAAGTACATCCATAGACCCGTGGCACGCATTGTGGAAATCTAAACGATT
rJMFF024P23+          GGTCCCTCCGCAAAGTACATCCATAGA-CCGTGGCACGCATTGTGGAAATCTAAACGATT
                      ____________________________________________________________
consensus             GGTCCCTCCGCAAAGTACATCCATAGACCCGTGGCACGCATTGTGGAAATCTAAACGATT
 
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rJMFF013H12+          GATGAACATAGTTACTGCAATTAGCGGGAGTATGGATTGGGACTTTGACGCTGCTCATGT
rJMFF018G15+          GATGAACATAGTTACTGCAATTAGCGGGAGTATGGATTGGGACTTTGACGCTGCTCATGT
rJMFF007I03+          GATGAACATAGTTACTGCAATTAGCGGGAGTATGGATTGGGACTTTGACGCTGCTCATGT
rJMFF024P23+          GATGAACATAGTTACTGCAATTAGCGGGAGTATGGATTGGGACTTTGACGCTGCTCATGT
                      ____________________________________________________________
consensus             GATGAACATAGTTACTGCAATTAGCGGGAGTATGGATTGGGACTTTGACGCTGCTCATGT
 
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rJMFF013H12+          TGTCCGGGGACAGAAAGCCGAGAATAAGGCGTTATGGCCCCACTTGGATGCCGATACATC
rJMFF018G15+          TGTCCGGGGACAGAAAGCCGAGAATAAGGCGTTATGGCCCCACTTGGATGCCGATACATC
JMFN036L14-                       GAAAGCCGAGAATAAGGCGTTATGGCCCCACTTGGATGCCGATACATC
rJMFF007I03+          TGTCCGGGGACAGAAAGCCGAGAATAAGGCGTTATGGCCCCACTTGGATGCCGATACATC
rJMFF024P23+          TGTCCGGGGACAGAAAGCCGAGAATAAGGCGTTATGGCCCCACTTGGATGCCGATACATC
rJMFF042I08+          TGTCCGGGGACAGAAAGCCGAGAATAAGGCGTTATGGCCCCACTTGGATGCCGATACATC
                      ____________________________________________________________
consensus             TGTCCGGGGACAGAAAGCCGAGAATAAGGCGTTATGGCCCCACTTGGATGCCGATACATC
 
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rJMFF013H12+          GCCAGATGCCCTCGTCGAAAAGATCCAAAAAGCGGTCGTGCCTGGAAGGAATCTGTATAT
rJMFF018G15+          GCCAGATGCCCTCGTCGAAAAGATCCAAAAAGCGGTCGTGCCTGGAAGGAATCTGTATAT
JMFN036L14-           GCCAGATGCCCTCGTCGAAAAGATCCAAAAAGCGGTCGTGCCTGGAAGGAATCTGGGGGT
rJMFF007I03+          GCCAGATGCCCTCGTCGAAAAGATCCAAAAAGCGGTCGTGCCTGGAAGGAATCTGTATAT
rJMFF024P23+          GCCAGATGCCCTCGTCGAAAAGATCCAAAAAGCGGTCGTGCCTGGAAGGAATCTGTATAT
rJMFF042I08+          GCCAGATGCCCTCGTCGAAAAGATCCAAAAAGCGGTCGTGCCTGGAAGGAATCTGTATAT
                      ____________________________________________________________
consensus             GCCAGATGCCCTCGTCGAAAAGATCCAAAAAGCGGTCGTGCCTGGAAGGAATCTGTATAT
 
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rJMFF013H12+          CGCCACAAACGAACCGTTCTATAATTACTTCGATAAATTGAGACCTCACTACAAGCTTCA
rJMFF018G15+          CGCCACAAACGAACCGTTCTATAATTACTTCGATAAATTGAGACCTCACTACAAGCTTCA
JMFN036L14-           GGCCACAAACGAACCGTTCTATAATTACTTCGATAAATTGAGACCTCACTACAAGCTTCA
rJMFF007I03+          CGCCACAAACGAACCGTTCTATAATTACTTCGATAAATTGAGACCTCACTACAAGCTTCA
rJMFF024P23+          CGCCACAAACGAACCGTTCTATAATTACTTCGATAAATTGAGACCTCACTACAAGCTTCA
rJMFF042I08+          CGCCACAAACGAACCGTTCTATAATTACTTCGATAAATTGAGACCTCACTACAAGCTTCA
                      ____________________________________________________________
consensus             CGCCACAAACGAACCGTTCTATAATTACTTCGATAAATTGAGACCTCACTACAAGCTTCA
 
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rJMFF013H12+          CTTGCTAGATGATTACCAGTATTTGTGGAGCAATACGAGCGAATGGTACAATGAAACAAC
rJMFF018G15+          CTTGCTAGATGATTACCAGTATTTGTGGAGCAATACGAGCGAATGGTACAATGAAACAAC
JMFN036L14-           CTTGCTAGATGATTACCAGTATTTGTGGAGCAATACGAGCGAATGGTACAATGAAACAAC
rJMFF007I03+          CTTGCTAGATGATTACCAGTATTTGTGGAGCAATACGAGCGAATGGTACAATGAAACAAC
rJMFF024P23+          CTTGCTAGATGATTACCAGTATTTGTGGAGCAATACGAGCGAATGGTACAATGAAACAAC
rJMFF042I08+          CTTGCTAGATGATTACCAGTATTTGTGGAGCAATACGAGCGAATGGTACAATGAAACAAC
                      ____________________________________________________________
consensus             CTTGCTAGATGATTACCAGTATTTGTGGAGCAATACGAGCGAATGGTACAATGAAACAAC
 
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rJMFF013H12+          CCAGCTGAACGGTGGGCGCCCCGTCGAATTCGATGGGTACATGAGGGTTGAAGTAGACAC
rJMFF018G15+          CCAGCTGAACGGTGGGCGCCCCGTCGAATTCGATGGGTACATGAGGGTTGAAGTAGACAC
JMFN036L14-           CCAGCTGAACGGTGGGCGCCCCGTCGAATTCGATGGGTACATGAGGGTTGAAGTAGACAC
rJMFF007I03+          CCAGCTGAACGGTGGGCGCCCCGTCGAATTCGATGGGTACATGAGGGTTGAAGTAGACAC
rJMFF024P23+          CCAGCTGAACGGTGGGCGCCCCGTCGAATTCGATGGGTACATGAGGGTTGAAGTAGACAC
rJMFF042I08+          CCAGCTGAACGGTGGGCGCCCCGTCGAATTCGATGGGTACATGAGGGTTGAAGTAGACAC
                      ____________________________________________________________
consensus             CCAGCTGAACGGTGGGCGCCCCGTCGAATTCGATGGGTACATGAGGGTTGAAGTAGACAC
 
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rJMFF013H12+          CGAGGTTCTTTACAGAGCCAAGACAAAGGTGGAGACGTTTTACAACTTGACCAAAGATTG
rJMFF018G15+          CGAGGTTCTTTACAGAGCCAAGACAAAGGTGGAGACGTTTTACAACTTGACCAAAGATTG
JMFN036L14-           CGAGGTTCTTTACAGAGCCAAGACAAAGGTGGAGACGTTTTACAACTTGACCAAAGATTG
rJMFF007I03+          CGAGGTTCTTTACAGAGCCAAGACAAAGGTGGAGACGTTTTACAACTTGACCAAAGATTG
rJMFF024P23+          CGAGGTTCTTTACAGAGCCAAGACAAAGGTGGAGACGTTTTACAACTTGACCAAAGATTG
rJMFF042I08+          CGAGGTTCTTTACAGAGCCAAGACAAAGGTGGAGACGTTTTACAACTTGACCAAAGATTG
                      ____________________________________________________________
consensus             CGAGGTTCTTTACAGAGCCAAGACAAAGGTGGAGACGTTTTACAACTTGACCAAAGATTG
 
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rJMFF013H12+          CAAGGATGGGATCAACACATGCTAGCTAGGCAGGCTGCGTATCATTTGTGAGTTCATATA
rJMFF018G15+          CAAGGATGGGATCAACACATGCTAGCTAGGCAGGCTGCGTATCATTTGTGAGTTCATATA
JMFN036L14-           CAAGGATGGGATCAACACATGCTAGCTAGGCAGGCTGCGTATCATTTGTGAGTTCATATA
rJMFF007I03+          CAAGGATGGGATCAACACATGCTAGCTAGGCAGGCTGCGTATCATTTGTGAGTTCATATA
rJMFF024P23+          CAAGGATGGGATCAACACATGCTAGCTAGGCAGGCTGCGTATCATTTGTGAGTTCATATA
rJMFF042I08+          CAAGGATGGGATCAACACATGCTAGCTAGGCAGGCTGCGTATCATTTGTGAGTTCATATA
                      ____________________________________________________________
consensus             CAAGGATGGGATCAACACATGCTAGCTAGGCAGGCTGCGTATCATTTGTGAGTTCATATA
 
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rJMFF013H12+          TACCATTTCGCATGCTTTTTGGCGTACCCAATTTTAGAACCAAGATGCTAAGTCATAAAT
rJMFF018G15+          TACCATTTCGCATGCTTTTTGGCGTACCCAATTTTAGAACCAAGATGCTAAGTCATAAAT
JMFN036L14-           TACCATTTCGCATGCTTTTTGGCGTACCCAATTTTAGAACCAAGATGCTAAGTCATAAAT
rJMFF007I03+          TACCATTTCGCATGCTTTTTGGCGTACCCAATTTTAGAACCAAGATGCTAAGTCATAAAT
rJMFF024P23+          TACCATTTCGCATGCTTTTTGGCGTACCCAATTTTAGAACCAAGATGCTAAGTCATAAAT
rJMFF042I08+          TACCATTTCGCATGCTTTTTGGCGTACCCAATTTTAGAACCAAGATGCTAAGTCATAAAT
                      ____________________________________________________________
consensus             TACCATTTCGCATGCTTTTTGGCGTACCCAATTTTAGAACCAAGATGCTAAGTCATAAAT
 
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rJMFF013H12+          TTATCAGGGTTGTTATTAGCGTGGATTTTCCATCGATCATATTGATTGTACCCCCCTTCT
rJMFF018G15+          TTATCAGGGTTGTTATTAGCGTGGATTTTCCATCGATCATATTGATTGTACCCCCCTTCT
JMFN036L14-           TTATCAGGGTTGTTATTAGCGTGGATTTTCCATCGATCATATTGATTGTACCCCCCTTCT
rJMFF007I03+          TTATCAGGGTTGTTATTAGCGTGGATTTTCCATCGATCATATTGATTGTACCCCCCTTCT
rJMFF024P23+          TTATCAGGGTTGTTATTAGCGTGGATTTTCCATCGATCATATTGATTGTACCCCCCTTCT
rJMFF042I08+          TTATCAGGGTTGTTATTAGCGTGGATTTTCCATCGATCATATTGATTGTACCCCCCTTCT
                      ____________________________________________________________
consensus             TTATCAGGGTTGTTATTAGCGTGGATTTTCCATCGATCATATTGATTGTACCCCCCTTCT
 
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rJMFF013H12+          GTCATGACATATTTGTACAATATATTCAGTTTTCTAAT                      
rJMFF018G15+          GTCATGACATATTTGTACAATATATTCAGTTTTCTAATACCACAA               
JMFN036L14-           GTCATGACATATTTGTACCATATA                                    
rJMFF007I03+          GTCATGACATATTTGTACAATATATTCAGTTTTCTAATACCACAA               
rJMFF024P23+          GTCATGACATATTTGTACAATATATTCAGTTTTCTAATACCACAA               
rJMFF042I08+          GTCATGACATATTTGTACAATATATTCAGTTTTCTAATACCACAATGCAATTATCTTGCT
                      ____________________________________________________________
consensus             GTCATGACATATTTGTACAATATATTCAGTTTTCTAATACCACAATGCAATTATCTTGCT