| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF004K18 | Sequence | 499 | 004457 (4) | ref|XP_009588520.1| | 4e-07 | PREDICTED: putative kinase-like protein TMKL1 [Nicotiana tomentosiformis] | 754 | 002663 (4) | ref|XP_009789263.1| | 2e-18 | PREDICTED: putative kinase-like protein TMKL1 [Nicotiana sylvestris] |
| JMFF015C19 | Sequence | 516 | 004457 (4) | ref|XP_009588520.1| | 4e-05 | PREDICTED: putative kinase-like protein TMKL1 [Nicotiana tomentosiformis] | 665 | 002663 (4) | ref|XP_004235179.1| | 2e-07 | PREDICTED: putative kinase-like protein TMKL1 [Solanum lycopersicum] |
| JMFF016I02 | Sequence | 464 | 004457 (4) | ref|XP_009588520.1| | 2e-04 | PREDICTED: putative kinase-like protein TMKL1 [Nicotiana tomentosiformis] | 756 | 002663 (4) | ref|XP_009789263.1| | 2e-18 | PREDICTED: putative kinase-like protein TMKL1 [Nicotiana sylvestris] |
| JMFF041M12 | Sequence | 594 | 004457 (4) | ref|XP_009588520.1| | 3e-24 | PREDICTED: putative kinase-like protein TMKL1 [Nicotiana tomentosiformis] | 593 | 002663 (4) | |||
This contig is upended
. : . : . : . : . : . :
rJMFF016I02+ GCTAAAGACGACATTTTTTTGCCGAATGTGGTCAAGAATGCCATCATTGAGGA
rJMFF004K18+ TAAAGACGACATTTTTTTGCCGAATGTGGTCAAGAATGCCATCATTGAGGA
____________________________________________________________
consensus GCTAAAGACGACATTTTTTTGCCGAATGTGGTCAAGAATGCCATCATTGAGGA
. : . : . : . : . : . :
rJMFF016I02+ TCGGATTACAGACTTGTTTCATCCGATGGTTCTTGGCCAAAGCAATGGTAAAAAAGAGGC
rJMFF015C19+ AAAGCAATGGTAAAAAAGAGGC
rJMFF004K18+ TCGGATTACAGACTTGTTTCATCCGATGGTTCTTGGCCAAAGCAATGGTAAAAAAGAGGC
____________________________________________________________
consensus TCGGATTACAGACTTGTTTCATCCGATGGTTCTTGGCCAAAGCAATGGTAAAAAAGAGGC
. : . : . : . : . : . :
rJMFF016I02+ GGTTGAAGATCATATTCTTGAATTGCTTCGACTTGCAATGGATTGCTGTTCCCCGTCGCC
rJMFF015C19+ GGTTGAAGATCATATTCTTGAATTGCTTCGACTTGCAATGGATTGCTGTTCCCCGTCGCC
rJMFF004K18+ GGTTGAAGATCATATTCTTGAATTGCTTCGACTTGCAATGGATTGCTGTTCCCCGTCGCC
____________________________________________________________
consensus GGTTGAAGATCATATTCTTGAATTGCTTCGACTTGCAATGGATTGCTGTTCCCCGTCGCC
. : . : . : . : . : . :
rJMFF016I02+ TTCTCTTCGGCCTACCGTTAAGGAGTTCCTCACTAGACTCGAAGAAATTGAAAGGTAACA
rJMFF015C19+ TTCTCTTCGGCCTACCGTTAAGGAGTTCCTCACTAGACTCGAAGAAATTGAAAGGTAACA
rJMFF004K18+ TTCTCTTCGGCCTACCGTTAAGGAGTTCCTCACTAGACTCGAAGAAATTGAAAGGTAACA
rJMFF041M12+ CGGCCTACCGTTAAGGAGTTCCTCACTAGACTCGAAGAAATTGAAAGGTAACA
____________________________________________________________
consensus TTCTCTTCGGCCTACCGTTAAGGAGTTCCTCACTAGACTCGAAGAAATTGAAAGGTAACA
. : . : . : . : . : . :
rJMFF016I02+ ATAAACGATAATTTTCTGCTGAAATGTGAACCCAGTTTTCTCGACAATCACTCGATCAAC
rJMFF015C19+ ATAAACGATAATTTTCTGCTGAAATGTGAACCCAGTTTTCTCGACAATCACTCGATCAAC
rJMFF004K18+ ATAAACGATAATTTTCTGCTGAAATGTGAACCCAGTTTTCTCGACAATCACTCGATCAAC
rJMFF041M12+ ATAAACGATAATTTTCTGCTGAAATGTGAACCCAGTTTTCTCGACAATCACTCGATCAAC
____________________________________________________________
consensus ATAAACGATAATTTTCTGCTGAAATGTGAACCCAGTTTTCTCGACAATCACTCGATCAAC
. : . : . : . : . : . :
rJMFF016I02+ TTGTGACACACATTGAGGCAGCCTAGTACAGCAATGACGATGTTGATTAATCTAACATTT
rJMFF015C19+ TTGTGACACACATTGAGGCAGCCTAGTACAGCAATGACGATGTTGATTAATCTAACATTT
rJMFF004K18+ TTGTGACACACATTGAGGCAGCCTAGTACAGCAATGACGATGTTGATTAATCTAACATTT
rJMFF041M12+ TTGTGACACACATTGAGGCAGCCTAGTACAGCAATGACGATGTTGATTAATCTAACATTT
____________________________________________________________
consensus TTGTGACACACATTGAGGCAGCCTAGTACAGCAATGACGATGTTGATTAATCTAACATTT
. : . : . : . : . : . :
rJMFF016I02+ GGGGTATACCGTGCTTTGGGGAATCAATCTTGAAACGCCACATTTCACATTTCAATCTGT
rJMFF015C19+ GGGGTATACCGTGCTTTGGGGAATCAATCTTGAAACGCCACATTTCACATTTCAATCTGT
rJMFF004K18+ GGGGTATACCGTGCTTTGGGGAATCAATCTTGAAACGCCACATTTCACATTTCAATCTGT
rJMFF041M12+ GGGGTATACCGTGCTTTGGGGAATCAATCTTGAAACGCCACATTTCACATTTCAATCTGT
____________________________________________________________
consensus GGGGTATACCGTGCTTTGGGGAATCAATCTTGAAACGCCACATTTCACATTTCAATCTGT
. : . : . : . : . : . :
rJMFF016I02+ TCAGTCACTATATTGCAAGATTGAAAGGGAAGCTACAAGAATTATGAAGCTGGCCCTTGA
rJMFF015C19+ TCAGTCACTATATTGCAAGATTGAAAGGGAAGCTACAAGAATTATGAAGCTGGCCCTTGA
rJMFF004K18+ TCAGTCACTATATTGCAAGATTGAAAGGGAAGCTACAAGAATTATGAAGCTGGCCCTTGA
rJMFF041M12+ TCAGTCACTATATTGCAAGATTGAAAGGGAAGCTACAAGAATTATGAAGCTGGCCCTTGA
____________________________________________________________
consensus TCAGTCACTATATTGCAAGATTGAAAGGGAAGCTACAAGAATTATGAAGCTGGCCCTTGA
. : . : . : . : . : . :
rJMFF016I02+ TCTTTTCCTGCTCGAAATGAATACCAGATTTCTTTATCATAGGGAGTTTGCTTGCTTGCA
rJMFF015C19+ TCTTTTCCTGCTCGAAATGAATACCAGATTTCTTTATCATAGGGAGTTTGCTTGCTTGCA
rJMFF004K18+ TCTTTTCCTGCTCGAAATGAATACCAGATTTCTTTATCATAGGGAGTTTGCTTGCTTGCA
rJMFF041M12+ TCTTTTCCTGCTCGAAATGAATACCAGATTTCTTTATCATAGGGAGTTTGCTTGCTTGCA
____________________________________________________________
consensus TCTTTTCCTGCTCGAAATGAATACCAGATTTCTTTATCATAGGGAGTTTGCTTGCTTGCA
. : . : . : . : . : . :
rJMFF016I02+ AGAAAATTCACGGGGTTATTAGAATGGAGAGGCCGAAAGATTCTTTAGCCAAATTCTTGT
rJMFF015C19+ AGAAAATTCACGGGGTTATTAGAATGGAGAGGCCGAAAGATTCTTTAGCCAAATTCTTGT
rJMFF004K18+ AGAAAATTCACGGGGTTATTAGAATGGAGAGGCCGAAAGATTCTTTAGCCAAATTCTTGT
rJMFF041M12+ AGAAAATTCACGGGGTTATTAGAATGGAGAGGCCGAAAGATTCTTTAGCCAAATTCTTGT
____________________________________________________________
consensus AGAAAATTCACGGGGTTATTAGAATGGAGAGGCCGAAAGATTCTTTAGCCAAATTCTTGT
. : . : . : . : . : . :
rJMFF016I02+ AATCTAATGACATTCGATTTTATCAGAATATCTCAGAACTGAAGATGATGACACTCATAT
rJMFF015C19+ AATCTAATGACATTCGATTTTATCAGAATATCTCAGAACTGAAGATGATGACACTCATAT
rJMFF004K18+ AATCTAATGACATTCGATTTTATCAGAATATCTCAGAACTGAAGATGATGACACTCATAT
rJMFF041M12+ AATCTAATGACATTCGATTTTATCAGAATATCTCAGAACTGAAGATGATGACACTCATAT
____________________________________________________________
consensus AATCTAATGACATTCGATTTTATCAGAATATCTCAGAACTGAAGATGATGACACTCATAT
. : . : . : . : . : . :
rJMFF016I02+ CTTGAATCTGCAGGCCATCCTACAGTTCAGAACTACACGGAGTTTGTCAAACTTATAAGA
rJMFF015C19+ CTTGAATCTGCAGGCCATCCTACAGTTCAGAACTACACGGAGTTTGTCAAACTTATAAGA
rJMFF004K18+ CTTGAATCTGCAGGCCATCCTACAGTTCAGAACTACACGGAGTTTGTCAAACTTATAAGA
rJMFF041M12+ CTTGAATCTGCAGGCCATCCTACAGTTCAGAACTACACGGAGTTTGTCAAACTTATAAGA
____________________________________________________________
consensus CTTGAATCTGCAGGCCATCCTACAGTTCAGAACTACACGGAGTTTGTCAAACTTATAAGA
. : . : . : . : . : . :
rJMFF016I02+ GATTAGATCTTACTGTATACATTTGATGATTATATATAAATCA
rJMFF015C19+ GATTAGATCTTACTGTATACATTTGATGATTATATATAAATCA
rJMFF004K18+ GATTAGATCTTACTGTATACATTTGATGATTATATATAAATCA
rJMFF041M12+ GATTAGATCTTACTGTATACATTTGATGATTATATATAAATCATATGCTAATTTCTTTTC
____________________________________________________________
consensus GATTAGATCTTACTGTATACATTTGATGATTATATATAAATCATATGCTAATTTCTTTTC