Contig 002661:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF024P01Sequence481000131 (2)ref|XP_009757611.1|1e-63PREDICTED: uncharacterized oxidoreductase At1g06690, chloroplastic [Nicotiana s684002661 (2)ref|XP_009757611.1|3e-93PREDICTED: uncharacterized oxidoreductase At1g06690, chloroplastic [Nicotiana s
JMFF041G14Sequence640000131 (2)ref|XP_009757611.1|6e-111PREDICTED: uncharacterized oxidoreductase At1g06690, chloroplastic [Nicotiana s634002661 (2)ref|XP_009757611.1|9e-69PREDICTED: uncharacterized oxidoreductase At1g06690, chloroplastic [Nicotiana s

Alignment

This contig is upended


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rJMFF024P01+                                                 AAAAAGAGGGGGATCCCCCTA
                      ____________________________________________________________
consensus                                                    AAAAAGAGGGGGATCCCCCTA
 
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rJMFF024P01+          GCTTCGAACCAAGTAAATTATAGTTTGATATACAGGTTGCCGGAGGAGAATGGGGTAAAA
                      ____________________________________________________________
consensus             GCTTCGAACCAAGTAAATTATAGTTTGATATACAGGTTGCCGGAGGAGAATGGGGTAAAA
 
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rJMFF024P01+          GCCNCCTGTGATGAACTAGGGATCACGTTAATTGCATATTCGCCTATTGCTCAAGGTGCT
rJMFF041G14+                                    GTTAATTGCATATTCGCCTATTGCTCAAGGTGCT
                      ____________________________________________________________
consensus             GCCNCCTGTGATGAACTAGGGATCACGTTAATTGCATATTCGCCTATTGCTCAAGGTGCT
 
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rJMFF024P01+          CTTACCGGAAAGTATACTCCAGAAAACCCTCCAACTGGTCCTCGGGGACGGATTTACACT
rJMFF041G14+          CTTACCGGAAAGTATACTCCAGAAAACCCTCCAACTGGTCCTCGGGGACGGATTTACACT
                      ____________________________________________________________
consensus             CTTACCGGAAAGTATACTCCAGAAAACCCTCCAACTGGTCCTCGGGGACGGATTTACACT
 
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rJMFF024P01+          CCTGAATTTTTAACCCAATTGCAGCCGCTGATAAACCGAATAAAGGGGATAGGAGAGAGC
rJMFF041G14+          CCTGAATTTTTAACCCAATTGCAGCCGCTGATAAACCGAATAAAGGGGATAGGAGAGAGC
                      ____________________________________________________________
consensus             CCTGAATTTTTAACCCAATTGCAGCCGCTGATAAACCGAATAAAGGGGATAGGAGAGAGC
 
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rJMFF024P01+          TACAGCAGAACTCCAACACAGGTGGTCCTCAACTGGTTGATNTCCCAGGAGAACGTCGTG
rJMFF041G14+          TACAGCAGAACTCCAACACAGGTGGTCCTCAACTGGTTGATCTCCCAGGAGAACGTCGTG
                      ____________________________________________________________
consensus             TACAGCAGAACTCCAACACAGGTGGTCCTCAACTGGTTGATCTCCCAGGAGAACGTCGTG
 
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rJMFF024P01+          CCCATCCCAGGAGCCAAAAACGCGGAGCAGGCTACAGAGTTTGCTGGTGCGCTCGGCTGG
rJMFF041G14+          CCCATCCCAGGAGCCAAAAACGCGGAGCAGGCTACAGAGTTTGCTGGTGCGCTCGGCTGG
                      ____________________________________________________________
consensus             CCCATCCCAGGAGCCAAAAACGCGGAGCAGGCTACAGAGTTTGCTGGTGCGCTCGGCTGG
 
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rJMFF024P01+          AGATTGACCAAGGAAGAAGTCGAGGAGCTTCGATNTTTGGCATCAGATATCAAGCCTGTT
rJMFF041G14+          AGATTGACCAAGGAAGAAGTCGAGGAGCTTCGATCTTTGGCATCAGATATCAAGCCTGTT
                      ____________________________________________________________
consensus             AGATTGACCAAGGAAGAAGTCGAGGAGCTTCGATCTTTGGCATCAGATATCAAGCCTGTT
 
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rJMFF024P01+          ATAGGTTTTCCTGTTGAAAAACTTTAAGTTAGGGCAACTTAAGCTGGTTGGTTTATNTCT
rJMFF041G14+          ATAGGTTTTCCTGTTGAAAAACTCTAAGTTAGGGCAACTTAAGCTGGTTGGTTTATCTCT
                      ____________________________________________________________
consensus             ATAGGTTTTCCTGTTGAAAAACTTTAAGTTAGGGCAACTTAAGCTGGTTGGTTTATCTCT
 
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rJMFF024P01+          TTATGGTCATTTGTGGGTTCGAGTCACAAGGCGGGGTTTACCCCGTTCATACCTTCGGGT
rJMFF041G14+          TTATGGTCATTTGTGGGTTCGAGTCACAAGGCGGGGTTTACCCCGTTCATACCTTCGGGT
                      ____________________________________________________________
consensus             TTATGGTCATTTGTGGGTTCGAGTCACAAGGCGGGGTTTACCCCGTTCATACCTTCGGGT
 
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rJMFF024P01+          AGTGCCCGTGGGCTTCTCCCGTTATCCAAAAAAATATGTATNTAAATATATTTTGTAAAG
rJMFF041G14+          AGTGCCCGTGGGCTTCTCCCGTTATCCAAAAAAATATGTATCTAAATATATTTTGTAAAG
                      ____________________________________________________________
consensus             AGTGCCCGTGGGCTTCTCCCGTTATCCAAAAAAATATGTATCTAAATATATTTTGTAAAG
 
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rJMFF024P01+          TTTATTTTTTTTTTGTAAAGCTTAGGGAACTTCTATGTTGTTCCATGGCATCACATATCG
rJMFF041G14+          TTTATTTTTTTTTTGTAAAGCTTAGGGAACTTCTATGTTGTTCCATGGCATCACATATCG
                      ____________________________________________________________
consensus             TTTATTTTTTTTTTGTAAAGCTTAGGGAACTTCTATGTTGTTCCATGGCATCACATATCG
 
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rJMFF024P01+          CTA                                                         
rJMFF041G14+          CTATCTTGTACTTTGGTAGAAATTGTACATTTCACTTTTTTGAAAAAAAAAAAAAAAACT
                      ____________________________________________________________
consensus             CTATCTTGTACTTTGGTAGAAATTGTACATTTCACTTTTTTGAAAAAAAAAAAAAAAACT