Contig 002658:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF003I04+                                                             TCCGATGGG
                      ____________________________________________________________
consensus                                                                TCCGATGGG
 
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rJMSF003I04+          TGGGAAAAGCAAAAGTCCAAGTTCCTACCGCTTCCAGCCGGGAGAGCGTCTGTACAGTCG
rJMFF040O20+                                                 GGGAGAGCGTCTGTACAGTCG
                      ____________________________________________________________
consensus             TGGGAAAAGCAAAAGTCCAAGTTCCTACCGCTTCCAGCCGGGAGAGCGTCTGTACAGTCG
 
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rJMSF003I04+          GACACGAGAGTACAGTTTCATCAAGATCAAATCCATTTTTTGGTTGTTCATGAGACTCAG
rJMFF040O20+          GACACGAGAGTACAGTTTCATCAAGATCAAATCCATTTTTTGGTTGTTCATGAGACTCAG
                      ____________________________________________________________
consensus             GACACGAGAGTACAGTTTCATCAAGATCAAATCCATTTTTTGGTTGTTCATGAGACTCAG
 
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rJMSF003I04+          CTCGCTATATACGAAGCCACAAAGTTGGAATGCGTTAAGCAGTGGGTCCAACGCGAGGCT
rJMFF040O20+          CTCGCTATATACGAAGCCACAAAGTTGGAATGCGTTAAGCAGTGGGTCCAACGCGAGGCT
                      ____________________________________________________________
consensus             CTCGCTATATACGAAGCCACAAAGTTGGAATGCGTTAAGCAGTGGGTCCAACGCGAGGCT
 
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rJMSF003I04+          GCTGCTCCAATATCTCACGCGACATTTTCGTGCGATAGCCAGCTGGTATACGCCAGTTTC
rJMFF040O20+          GCTGCTCCAATATCTCACGCGACATTTTCGTGCGATAGCCAGCTGGTATACGCCAGTTTC
                      ____________________________________________________________
consensus             GCTGCTCCAATATCTCACGCGACATTTTCGTGCGATAGCCAGCTGGTATACGCCAGTTTC
 
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rJMSF003I04+          TTAGATGCAACTGTTTGCGTTTTCACTGCTGCAAACCTGTGTCTAAGATGCCGCATTGCT
rJMFF040O20+          TTAGATGCAACTGTTTGCGTTTTCACTGCTGCAAACCTGTGTCTAAGATGCCGCATTGCT
                      ____________________________________________________________
consensus             TTAGATGCAACTGTTTGCGTTTTCACTGCTGCAAACCTGTGTCTAAGATGCCGCATTGCT
 
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rJMSF003I04+          CCTTCAGCTTACCTTTCCCCTAGTCT---CAGTTCGGGTGTCCATCCACTCGTGGTGGCT
rJMFF040O20+          CCTTCAGCTTACCTTTCCCCTAGTCTCAGCAGTTCGGGTGTCCATCCACTCGTGGTGGCT
                      ____________________________________________________________
consensus             CCTTCAGCTTACCTTTCCCCTAGTCTCAGCAGTTCGGGTGTCCATCCACTCGTGGTGGCT
 
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rJMSF003I04+          GCCCATCCACAAGATCCAAACCAGTTTGCGTTAGGGCTATCAGATGGCGGCGTTCTTGTG
rJMFF040O20+          GCCCATCCACAAGATCCAAACCAGTTTGCGTTAGGGCTATCAGATGGCGGCGTTCTTGTG
                      ____________________________________________________________
consensus             GCCCATCCACAAGATCCAAACCAGTTTGCGTTAGGGCTATCAGATGGCGGCGTTCTTGTG
 
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rJMSF003I04+          TTTGAGCCGCTGGAATCAGAGGGCAAATGGGGCGTGCCTCCCCCGGTTGAAAACGGATCG
rJMFF040O20+          TTTGAGCCGCTGGAATCAGAGGGCAAATGGGGCGTGCCTCCCCCGGTTGAAAACGGATCG
                      ____________________________________________________________
consensus             TTTGAGCCGCTGGAATCAGAGGGCAAATGGGGCGTGCCTCCCCCGGTTGAAAACGGATCG
 
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rJMSF003I04+          GGAAGCAACACAACTCCAGTCTCTGATCAACCTCCAAGATAATAATCAAAATAAGTTATG
rJMFF040O20+          GGAAGCAACACAACTCCAGTCTCTGATCAACCTCCAAGATAATAATCAAAATAAGTTATG
                      ____________________________________________________________
consensus             GGAAGCAACACAACTCCAGTCTCTGATCAACCTCCAAGATAATAATCAAAATAAGTTATG
 
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rJMSF003I04+          AAAAGTTTGATGTACATACTTGCTTGGCTGGCTGGGTGCAACAGCAGCAGATACTTTAGT
rJMFF040O20+          AAAAGTTTGATGTACATACTTGCTTGGCTGGCTGGGTGCAACAGCAGCAGATACTTTAGT
                      ____________________________________________________________
consensus             AAAAGTTTGATGTACATACTTGCTTGGCTGGCTGGGTGCAACAGCAGCAGATACTTTAGT
 
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rJMSF003I04+          TCTAATCTGCCTGCCTGCCTGCTTGCATTTGCTTGTTGTAGGAGACTAACCTGCTGATCT
rJMFF040O20+          TCTAATCTGCCTGCCTGCCTGCTTGCATTTGCTTGTTGTAGGAGACTAACCTGCTGATCT
                      ____________________________________________________________
consensus             TCTAATCTGCCTGCCTGCCTGCTTGCATTTGCTTGTTGTAGGAGACTAACCTGCTGATCT
 
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rJMSF003I04+          CTCAGTCAAAAACT                                              
rJMFF040O20+          CTCAGTCAAAAACTTGGAACCACCAACTCACCAACCTTCCTTAAATGGTTTCCAAAATAA
                      ____________________________________________________________
consensus             CTCAGTCAAAAACTTGGAACCACCAACTCACCAACCTTCCTTAAATGGTTTCCAAAATAA