| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF012E08 | Sequence | 498 | 002130 (6) | ref|XP_004238153.1| | 7e-77 | PREDICTED: serine/threonine-protein kinase tricorner [Solanum lycopersicum] | 777 | 002654 (6) | ref|XP_006354880.1| | 5e-134 | PREDICTED: serine/threonine-protein kinase tricorner-like [Solanum tuberosum] |
| JMFF033P23 | Sequence | 332 | 002130 (6) | ref|XP_006354880.1| | 5e-35 | PREDICTED: serine/threonine-protein kinase tricorner-like [Solanum tuberosum] | 683 | 002654 (6) | ref|XP_006354880.1| | 2e-82 | PREDICTED: serine/threonine-protein kinase tricorner-like [Solanum tuberosum] |
| JMFF040D14 | Sequence | 532 | 002130 (6) | ref|XP_004238153.1| | 3e-83 | PREDICTED: serine/threonine-protein kinase tricorner [Solanum lycopersicum] | 770 | 002654 (6) | ref|XP_006354880.1| | 2e-98 | PREDICTED: serine/threonine-protein kinase tricorner-like [Solanum tuberosum] |
| JMSF011A22 | Sequence | 311 | 002130 (6) | ref|XP_004238153.1| | 8e-08 | PREDICTED: serine/threonine-protein kinase tricorner [Solanum lycopersicum] | 728 | 002654 (6) | ref|XP_006354880.1| | 1e-90 | PREDICTED: serine/threonine-protein kinase tricorner-like [Solanum tuberosum] |
| JMSF017K03 | Sequence | 552 | 002130 (6) | ref|XP_004238153.1| | 1e-76 | PREDICTED: serine/threonine-protein kinase tricorner [Solanum lycopersicum] | 746 | 002654 (6) | ref|XP_006354880.1| | 3e-123 | PREDICTED: serine/threonine-protein kinase tricorner-like [Solanum tuberosum] |
| JMSF046J15 | Sequence | 806 | 002130 (6) | ref|XP_004238153.1| | 6e-122 | PREDICTED: serine/threonine-protein kinase tricorner [Solanum lycopersicum] | 787 | 002654 (6) | ref|XP_006354880.1| | 5e-94 | PREDICTED: serine/threonine-protein kinase tricorner-like [Solanum tuberosum] |
This contig is upended
. : . : . : . : . : . :
rJMFF012E08+ CT
____________________________________________________________
consensus CT
. : . : . : . : . : . :
rJMFF012E08+ ACTGTTGGAACTCTGGATTATATGGCACCGGAGGTTCTGTTAAAAAAAGGATATGGAATG
rJMSF017K03+ TAAAAAAAGGATATGGAATG
____________________________________________________________
consensus ACTGTTGGAACTCTGGATTATATGGCACCGGAGGTTCTGTTAAAAAAAGGATATGGAATG
. : . : . : . : . : . :
rJMFF012E08+ GAATGCGATTGGTGGTCTCTAGGAGCAATCATGTATGAGATGCTTGTAGGCTATCCTCCT
rJMSF017K03+ GAATGCGATTGGTGGTCTCTAGGAGCAATCATGTATGAGATGCTTGTAGGCTATCCTCCT
rJMSF046J15+ T
____________________________________________________________
consensus GAATGCGATTGGTGGTCTCTAGGAGCAATCATGTATGAGATGCTTGTAGGCTATCCTCCT
. : . : . : . : . : . :
rJMFF012E08+ TTTTGTTCAGAGGATCCAAGGATGACATGCCGT-AAGATTGTCAATTGGAGAACATGCTT
rJMSF017K03+ TTTTGTTCAGAGGATCCAAGGATGACATGCCGT-AAGATTGTCAATTGGAGAACATGCTT
rJMSF046J15+ TTTGGTTCAGAGGATCCAAGGATGACATGCCGTAAAGATTGTCAATTGGAGAACATGCTT
rJMSF011A22+ GGAGAACATGCCT
rJMFF040D14+ GAGGATCCAAGGATGACATGCCGT-AAGATTGTCAATTGGAGAACATGCTT
____________________________________________________________
consensus TTTTGTTCAGAGGATCCAAGGATGACATGCCGT-AAGATTGTCAATTGGAGAACATGCTT
. : . : . : . : . : . :
rJMFF012E08+ GAAATTCCCTGACGAACCAAAAGTATCAGATGAGGCCAAGGATCTTATCTGTCATTTGTT
rJMSF017K03+ GAAATTCCCTGACGAACCAAAAGTATCAGATGAGGCCAAGGATCTGATCTGTCATTTGTT
rJMSF046J15+ GAAATTCCCTGACGAACCAAAAGTATCAGATGAGGCCAAGGATCTGATCTGTCATTTGTT
rJMSF011A22+ GAAATTCCCTGACGAACCAAAAGTATCAGATGAGGCCAAGGATCTGATCTGTCATTTGTT
rJMFF033P23+ CCAAAAGTATCAGATGAGGCCAAGGATNTGATCTGTCATTTGTT
rJMFF040D14+ GAAATTCCCTGACGAACCAAAAGTATCAGATGAGGCCAAGGATCTGATCTGTCATTTGTT
____________________________________________________________
consensus GAAATTCCCTGACGAACCAAAAGTATCAGATGAGGCCAAGGATCTGATCTGTCATTTGTT
. : . : . : . : . : . :
rJMFF012E08+ ATGTGATGTGGAATCAAGGTTGGGGACTAAAGGAGTAGAAGAAATAAAGGCACATCCATG
rJMSF017K03+ ATGTGATGTGGAATCAAGGTTGGGGACTAAAGGAGTAGAAGAAATAAAGGCACATCCATG
rJMSF046J15+ ATGTGATGTGGAATCAAGGTTGGGGACTAAAGGAGTAGAAGAAATAAAGGCACATCCATG
rJMSF011A22+ ATGTGATGTGGAATCAAGGTTGGGGACTAAAGGAGTAGAAGAAATAAAGGCACATCCATG
rJMFF033P23+ ATGTGATGTGGAATCAAGGTTGGGGACTAAAGGAGTAGAAGAAATAAAGGCACATCCATG
rJMFF040D14+ ATGTGATGTGGAATCAAGGTTGGGGACTAAAGGAGTAGAAGAAATAAAGGCACATCCATG
____________________________________________________________
consensus ATGTGATGTGGAATCAAGGTTGGGGACTAAAGGAGTAGAAGAAATAAAGGCACATCCATG
. : . : . : . : . : . :
rJMFF012E08+ GTTCTCGGGTGTCAAATGGGACATGCTTTATGAAATGGAAGCTGCTTACAGGCCTAGAGT
rJMSF017K03+ GTTCTCGGGTGTCAAATGGGACATGCTTTATGAAATGGAAGCTGCTTACAGGCCTAGAGT
rJMSF046J15+ GTTCTCGGGTGTCAAATGGGACATGCTTTATGAAATGGAAGCTGCTTACAGGCCTAGAGT
rJMSF011A22+ GTTCTCGGGTGTCAAATGGGACATGCTTTATGAAATGGAAGCTGCTTACAGGCCTAGAGT
rJMFF033P23+ GTTCTCGGGTGTCAAATGGGACATGCTTTATGAAATGGAAGCTGCTTACAGGCCTAGAGT
rJMFF040D14+ GTTCTCGGGTGTCAAATGGGACATGCTTTATGAAATGGAAGCTGCTTACAGGCCTAGAGT
____________________________________________________________
consensus GTTCTCGGGTGTCAAATGGGACATGCTTTATGAAATGGAAGCTGCTTACAGGCCTAGAGT
. : . : . : . : . : . :
rJMFF012E08+ TACTGGGGAATTAGACACACAGAATTTTGAGAAGTTCCCTGAAGTAGAAGATCCACCGTC
rJMSF017K03+ TACTGGGGAATTAGACACACAGAATTTTGAGAAGTTCCCTGAAGTAGAAGATCCACCGTC
rJMSF046J15+ TACTGGGGAATTAGACACACAGAATTTTGAGAAGTTCCCTGAAGTAGAAGATCCACCGTC
rJMSF011A22+ TACTGGGGAATTAGACACACAGAATTTTGAGAAGTTCCCTGAAGTAGAAGATCCACCGTC
rJMFF033P23+ TACTGGGGAATTAGACACACAGAATTTTGAGAAGTTCCCTGAAGTAGAAGATCCACCGTC
rJMFF040D14+ TACTGGGGAATTAGACACACAGAATTTTGAGAAGTTCCCTGAAGTAGAAGATCCACCGTC
____________________________________________________________
consensus TACTGGGGAATTAGACACACAGAATTTTGAGAAGTTCCCTGAAGTAGAAGATCCACCGTC
. : . : . : . : . : . :
rJMFF012E08+ AGCAACACCAAGAGTAGGACCTTGGCGGAAGATGTTAACATCAAAAGATTCCAATTTTAT
rJMSF017K03+ AGCAACACCAAGAGTAGGACCTTGGCGGAAGATGTTAACATCAAAAGATTCCAATTTTAT
rJMSF046J15+ AGCAACACCAAGAGTAGGACCTTGGCGGAAGATGTTAACATCAAAAGATTCCAATTTTAT
rJMSF011A22+ AGCAACACCAAGAGTAGGACCTTGGCGGAAGATGTTAACATCAAAAGATTCCAATTTTAT
rJMFF033P23+ AGCAACACCAAGAGTAGGACCTTGGCGGAAGATGTTAACATCAAAAGATTCCAATTTTAT
rJMFF040D14+ AGCAACACCAAGAGTAGGACCTTGGCGGAAGATGTTAACATCAAAAGATTCCAATTTTAT
____________________________________________________________
consensus AGCAACACCAAGAGTAGGACCTTGGCGGAAGATGTTAACATCAAAAGATTCCAATTTTAT
. : . : . : . : . : . :
rJMFF012E08+ TGGATTTACTTTCAAGAAATCTGATATTCTTAAATCAGCTGAAACTTCAGGAATAGACAT
rJMSF017K03+ TGGATTTACTTTCAAGAAATCTGATATTCTTAAATCAGCTGAAACTTCAGGAATAGACAT
rJMSF046J15+ TGGATTTACTTTCAAGAAATCTGATATTCTTAAATCAGCTGAAACTTCAGGAATAGACAT
rJMSF011A22+ TGGATTTACTTTCAAGAAATCTGATATTCTTAAATCAGCTGAAACTTCAGGAATAGACAT
rJMFF033P23+ TGGATTTACTTTCAAGAAATCTGATATTCTTAAATCAGCTGAAACTTCAGGAATAGACAT
rJMFF040D14+ TGGATTTACTTTCAAGAAATCTGATATTCTTAAATCAGCTGAAACTTCAGGAATAGACAT
____________________________________________________________
consensus TGGATTTACTTTCAAGAAATCTGATATTCTTAAATCAGCTGAAACTTCAGGAATAGACAT
. : . : . : . : . : . :
rJMFF012E08+ GAGTTCCAATGGACCTTCAAAGCCCCCGTCCTTGGTAACACTGCTTGGGCGGATAGATTT
rJMSF017K03+ GAGTTCCAATGGACCTTCAAAGCCCCCGTCCTTGGTAACACTGCTTGGGCGGATAGATTT
rJMSF046J15+ GAGTTCCAATGGACCTTCAAAGCCCCCGTCCTTGGTAACACTGCTTGGGCGGATAGATTT
rJMSF011A22+ GAGTTCCAATGGACCTTCAAAGCCCCCGTCCTTGGTAACACTGCTTGGGCGGATAGATTT
rJMFF033P23+ GAGTTCCAATGGACCTTCAAAGCCCCCGTCCTTGGTAACACTGCTTGGGCGGATAGATTT
rJMFF040D14+ GAGTTCCAATGGACCTTCAAAGCCCCCGTCCTTGGTAACACTGCTTGGGCGGATAGATTT
____________________________________________________________
consensus GAGTTCCAATGGACCTTCAAAGCCCCCGTCCTTGGTAACACTGCTTGGGCGGATAGATTT
. : . : . : . : . : . :
rJMFF012E08+ GCAAGACACTCCAATAGCAGAGGATGAGCAGAAGGAAAAAAGTGGCTGATTTCATCATCG
rJMSF017K03+ GCAAGACACTCCAATAGCAGAGGATGAGCAGAAGGAAAAAAGTGGCTGATTTCATCATCG
rJMSF046J15+ GCAAGACACTCCAATAGCAGAGGATGAGCAGAAGGAAAAAAGTGGCTGATTTCATCATCG
rJMSF011A22+ GCAAGACACTCCAATAGCAGAGGATGAGCAGAAGGAAAAAAGTGGCTGATTTCATCATCG
rJMFF033P23+ GCAAGACACTCCAATAGCAGAGGATGAGCAGAAGGAAAAAAGTGGCTGATTTCATCATCG
rJMFF040D14+ GCAAGACACTCCAATAGCAGAGGATGAGCAGAAGGAAAAAAGTGGCTGATTTCATCATCG
____________________________________________________________
consensus GCAAGACACTCCAATAGCAGAGGATGAGCAGAAGGAAAAAAGTGGCTGATTTCATCATCG
. : . : . : . : . : . :
rJMFF012E08+ CCTACTGCATTCTTCTACCATTCTATCAAGGTGTAATATTAAAGCGGCTAATTTCTGTAT
rJMSF017K03+ CCTACTGCATTCTTCTACCATTCTATCAAGGTGTAATATTAAAGCGGCTAATTTCTGTAT
rJMSF046J15+ CCTACTGCATTCTTCTACCATTCTATCAAGGTGTAATATTAAAGCGGCTAATTTCTGTAT
rJMSF011A22+ CCTACTGCATTCTTCTACCATTCTATCAAGGTGTAATATTAAAGCGGCTAATTTCTGTAT
rJMFF033P23+ CCTACTGCATTCTTCTACCATTCTATCAAGGTGTAATATTAAAGCGGCTAATTTCTGTAT
rJMFF040D14+ CCTACTGCATTCTTCTACCATTCTATCAAGGTGTAATATTAAAGCGGCTAATTTCTGTAT
____________________________________________________________
consensus CCTACTGCATTCTTCTACCATTCTATCAAGGTGTAATATTAAAGCGGCTAATTTCTGTAT
. : . : . : . : . : . :
rJMFF012E08+ AAAAGAGAATAAGCAGTCAGCTGTGAAGCACATACAGTTTTGAGCTCAACATATTT
rJMSF017K03+ AAAAGAGAATAAGCAGTCAGCTGTGAAGCACATACAGTTTTGAGCTCAACATATTTATGT
rJMSF046J15+ AAAAGAGAATAAGCAGTCAGCTGTGAAGCACATACAGTTTTGAGCTCAACATATTTATGT
rJMSF011A22+ AAAAGAGAATAAGCAGTCAGCTGTGAAGCACATACAGTTTTGAGCTCAACATATTTATGT
rJMFF033P23+ AAAAGAGAATAAGCAGTCAGCTGTGAAGCACATACAGTTTTGAGCTCAACATATTTATGT
rJMFF040D14+ AAAAGAGAATAAGCAGTCAGCTGTGAAGCACATACAGTTTTGAGCTCAACATATTTATGT
____________________________________________________________
consensus AAAAGAGAATAAGCAGTCAGCTGTGAAGCACATACAGTTTTGAGCTCAACATATTTATGT
. : . : . : . : . : . :
rJMSF017K03+ ATGCT
rJMSF046J15+ ATGCTTCTTCTGTCGTTTACAATTTTTCCTTTTCCTCCAGCTCTGGATTTGTTTTACTGA
rJMSF011A22+ ATGCTTCTTCTGTCGTTTACAATTTTTCCTTTTCCTCCAGCTCTGGATTTGTTTTACTGA
rJMFF033P23+ ATGCTTCTTCTGTCGTTTACAATTTTTCCTTTTCCTCCAGCTCTGGATTTGTTTTACTGA
rJMFF040D14+ ATGCTTCTTCTGTCGTTTACAATTTTTCCTTTTCCTCCAGCTCTGGATTTGTTTTACTGA
____________________________________________________________
consensus ATGCTTCTTCTGTCGTTTACAATTTTTCCTTTTCCTCCAGCTCTGGATTTGTTTTACTGA
. : . : . : . : . : . :
rJMSF046J15+ AGTTAGTATATTGTATGTACTGATGTACAGAAAAAAGA
rJMSF011A22+ AGTTAGTATATTGTATGTACTGATGTACAGAAAAAAGA
rJMFF033P23+ AGTTAGTATATTGTATGTACTGATGTACAGAAAAAAGA
rJMFF040D14+ AGTTAGTATATTGTATGTACTGATGTACAGAAAAAAGACCTGTTACCCGATTCATTCATT
____________________________________________________________
consensus AGTTAGTATATTGTATGTACTGATGTACAGAAAAAAGACCTGTTACCCGATTCATTCATT