Contig 002653:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF039N13Sequence570002653 (2)ref|XP_009599283.1|294PREDICTED: uncharacterized protein LOC104094965 [Nicotiana tomentosiformis]717002653 (2)ref|XP_009772449.1|333PREDICTED: uncharacterized protein LOC104222827 [Nicotiana sylvestris]

Alignment

This contig is upended


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JMFF039N13-                                                          ACCATAGTTACAA
                      ____________________________________________________________
consensus                                                            ACCATAGTTACAA
 
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JMFF039N13-           ATTAATTAAATTAGTGTGAAGTAAGGTGAGGCTTTCCGAATTCCGATTGTATTTTTCCGG
                      ____________________________________________________________
consensus             ATTAATTAAATTAGTGTGAAGTAAGGTGAGGCTTTCCGAATTCCGATTGTATTTTTCCGG
 
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JMFF039N13-           TGAAAATGGTGGGTGGTGGTACAAAGCCTGCATGGATGGAAGGGCTAATGGCGGAGACAT
                      ____________________________________________________________
consensus             TGAAAATGGTGGGTGGTGGTACAAAGCCTGCATGGATGGAAGGGCTAATGGCGGAGACAT
 
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JMFF039N13-           TCTTTGGCGGTTGCGGTGTTCACCAGCATCGCCGGAAGAACGAGAAGAACATCTTCTGCT
rJMFF039N13+             TTGGCGGTTGCGGTGTTCACCAGCATCGCCGGAAGAACGAGAAGAACATCTTCTGCT
                      ____________________________________________________________
consensus             TCTTTGGCGGTTGCGGTGTTCACCAGCATCGCCGGAAGAACGAGAAGAACATCTTCTGCT
 
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JMFF039N13-           TACTTTGTTGCCAAAGCTTCTGCCCTCACTGCCTCCCTTCTCATCAATCTCATCCCTTTC
rJMFF039N13+          TACTTTGTTGCCAAAGCTTCTGCCCTCACTGCCTCCCTTCTCATCAATCTCATCCCTTTC
                      ____________________________________________________________
consensus             TACTTTGTTGCCAAAGCTTCTGCCCTCACTGCCTCCCTTCTCATCAATCTCATCCCTTTC
 
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JMFF039N13-           TCCAGGTGAGAAGATATGTGTACCAAGATGTGATAAGGTTGAATGACTTGGAGAAGTTGA
rJMFF039N13+          TCCAGGTGAGAAGATATGTGTACCAAGATGTGATAAGGTTGAATGACTTGGAGAAGTTGA
                      ____________________________________________________________
consensus             TCCAGGTGAGAAGATATGTGTACCAAGATGTGATAAGGTTGAATGACTTGGAGAAGTTGA
 
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JMFF039N13-           TTGACTGCTCCTACATTCAGCCTTATACGATAAACAGTGCCAAAGTGATATTCTTGAATC
rJMFF039N13+          TTGACTGCTCCTACATTCAGCCTTATACGATAAACAGTGCCAAAGTGATATTCTTGAATC
                      ____________________________________________________________
consensus             TTGACTGCTCCTACATTCAGCCTTATACGATAAACAGTGCCAAAGTGATATTCTTGAATC
 
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JMFF039N13-           AGAGGGCGCAATCCCGGTCTTGCAAGGGTTCCGGCAATTCTTGTTTCACTTGTGATAGAA
rJMFF039N13+          AGAGGGCGCAATCCCGGTCTTGCAAGGGTTCCGGCAATTCTTGTTTCACTTGTGATAGAA
                      ____________________________________________________________
consensus             AGAGGGCGCAATCCCGGTCTTGCAAGGGTTCCGGCAATTCTTGTTTCACTTGTGATAGAA
 
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JMFF039N13-           TACTGCAAGACCCCTTTAGCTTCTGTTCTCTTTCCTGCAAGGTTGATTTCATGGTCTACC
rJMFF039N13+          TACTGCAAGACCCCTTTAGCTTCTGTTCTCTTTCCTGCAAGGTTGATTTCATGGTCTACC
                      ____________________________________________________________
consensus             TACTGCAAGACCCCTTTAGCTTCTGTTCTCTTTCCTGCAAGGTTGATTTCATGGTCTACC
 
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JMFF039N13-           ATGACCAGGATTTATCAAGCATTCTCTTCAAGTTTGATGAATCAGATTTCACCTTCTCCC
rJMFF039N13+          ATGACCAGGATTTATCAAGCATTCTCTTCAAGTTTGATGAATCAGATTTCACCTTCTCCC
                      ____________________________________________________________
consensus             ATGACCAGGATTTATCAAGCATTCTCTTCAAGTTTGATGAATCAGATTTCACCTTCTCCC
 
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JMFF039N13-           AGTTCGAGGGGCTACGG                                           
rJMFF039N13+          AGTTCGAGGGGCTACGGATGGACGGATCGGATTCACCAGACGACGAAGGCCAACACACTC
                      ____________________________________________________________
consensus             AGTTCGAGGGGCTACGGATGGACGGATCGGATTCACCAGACGACGAAGGCCAACACACTC
 
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rJMFF039N13+          CGTACTCCTCTCTAGAGGACCCGTTGGAGTACAAGAATACTTCTTCCTCCAACACCGCCA
                      ____________________________________________________________
consensus             CGTACTCCTCTCTAGAGGACCCGTTGGAGTACAAGAATACTTCTTCCTCCAACACCGCCA
 
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rJMFF039N13+          TTGACATTTCACGCGATTCCGAGACCAAAAGGAACAAGAAAGGAAGTAGCGGTTTTCTCC
                      ____________________________________________________________
consensus             TTGACATTTCACGCGATTCCGAGACCAAAAGGAACAAGAAAGGAAGTAGCGGTTTTCTCC
 
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rJMFF039N13+          CAGGTTTCATGGTGTCCTTGAACAATAGGAGAAAGGGTGCCCCTTCAAGGTCTCCCCTTT
                      ____________________________________________________________
consensus             CAGGTTTCATGGTGTCCTTGAACAATAGGAGAAAGGGTGCCCCTTCAAGGTCTCCCCTTT
 
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rJMFF039N13+          CTTGAAGATCAATTTGAATGTATTATTATTAGCTTCGATCTGATCTATCTCTTAATAAAA
                      ____________________________________________________________
consensus             CTTGAAGATCAATTTGAATGTATTATTATTAGCTTCGATCTGATCTATCTCTTAATAAAA