Contig 002651:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF026I20Sequence600002651 (4)678002651 (4)
JMFF039C15Sequence446002651 (4)612002651 (4)

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF039C15- AACTCTTCTTTTCATGCAATTAATTTCTTAATTTCTCCGCCTCTCCAGATC
JMFF026I20- AACTCTTCTTTTCATGCAATTAATTTCTTAATTTCTCCGCCTCTCCAGATC
rJMFF026I20+ TTCTCCGCCTCTCCAGATN
                      ____________________________________________________________
consensus AACTCTTCTTTTCATGCAATTAATTTCTTAATTTCTCCGCCTCTCCAGATC
 
. : . : . : . : . : . :
JMFF039C15- TGCTTTCTTCCCTCAAGATTTGAGCTTTCTTTACCCTCTGGTCTTTCTTCTCTCTAGCTC
JMFF026I20- TGCTTTCTTCCCTCAAGATTTGAGCTTTCTTTACCCTCTGGTCTTTCTTCTCTCTAGCTC
rJMFF026I20+ TGCTTTCTTCCCTCAAGATNTGAGCTNTCTTTACCCTCTGGTCTTTCTTCTCTCTAGCTC
rJMFF039C15+ TCTCTCTAGCTC
                      ____________________________________________________________
consensus TGCTTTCTTCCCTCAAGATTTGAGCTTTCTTTACCCTCTGGTCTTTCTTCTCTCTAGCTC
 
. : . : . : . : . : . :
JMFF039C15- CCTTATCTCTTTCAGATCTACCAGTCGAAGGAGAAGACGACAGC-GGTGGCGACGGCGCG
JMFF026I20- CCTTATCTCTTTCAGATCTACCAGTCGAAGGAGAAGACGACAGC-GGTGGCGACGGCGCG
rJMFF026I20+ CCTTATCTCTTTCAGATCTACCAGTCGAAGGAGAAGACGACAGC-GGTGGCGACGGCGCG
rJMFF039C15+ CCTTATCTCTTTCAGATCTACCAGTCGAAGGAGAAGACGACAGCGGGTGGCGACGGCGCG
                      ____________________________________________________________
consensus CCTTATCTCTTTCAGATCTACCAGTCGAAGGAGAAGACGACAGC-GGTGGCGACGGCGCG
 
. : . : . : . : . : . :
JMFF039C15- GAAGACGACAGCGTCATGTGTGTGCGAAGCCGGCGCCGACTCCCAGCCAGCCGATATTCC
JMFF026I20- GAAGACGACAGCGTCATGTGTGTGCGAAGCCGGCGCCGACTCCCAGCCAGCCGATATTCC
rJMFF026I20+ GAAGACGACAGCGTCATGTGTGTGCGAAGCCGGCGCCGACTCCCAGCCAGCCGATATTCC
rJMFF039C15+ GAAGACGACAGCGTCATGTGTGTGCGAAGCCGGCGCCGACTCCCAGCCAGCCGATATTCC
                      ____________________________________________________________
consensus GAAGACGACAGCGTCATGTGTGTGCGAAGCCGGCGCCGACTCCCAGCCAGCCGATATTCC
 
. : . : . : . : . : . :
JMFF039C15- CATCTGCGATCGATTAGTTCGCCGTTCTTCTGGAGCCAGCTCAGGGACGACGAAGCTGCT
JMFF026I20- CATCTGCGATCGATTAGTTCGCCGTTCTTCTGGAGCCAGCTCAGGGACGACGAAGCTGCT
rJMFF026I20+ CATCTGCGATCGATTAGTTCGCCGTTCTTTTGGAGCCAGCTCAGGGACGACGAAGNTGNT
rJMFF039C15+ CATCTGCGATCGATTAGTTCGCCGTTCTTNTGGAGCCAGCTCAGGGACGACGAAGCTGCT
                      ____________________________________________________________
consensus CATCTGCGATCGATTAGTTCGCCGTTCTTCTGGAGCCAGCTCAGGGACGACGAAGCTGCT
 
. : . : . : . : . : . :
JMFF039C15- ACGTTTCCGGAATCCACCAATCTGTTGATTGTAGATTTCCAGTGAGCCCAGTCGTTATCG
JMFF026I20- ACGTTTCCGGAATCCACCAATCTGTTGATTGTAGATTTCCAGTGAGCCCAGTCGTTATCG
rJMFF026I20+ ACGTTTCCGGAATCCACCAATCTGTTGATTGTAGATTTCCAGTGAGCCCAGTCGTTATCG
rJMFF039C15+ ACGTTTCCGGAATCCACCAATCTGTTGATTGTAGATTTCCAGTGAGCCCAGTCGTTATCG
                      ____________________________________________________________
consensus ACGTTTCCGGAATCCACCAATCTGTTGATTGTAGATTTCCAGTGAGCCCAGTCGTTATCG
 
. : . : . : . : . : . :
JMFF039C15- TCGACACGCGATCTTCGCCGTCGCCGGAATCCGGTTGTGGGCGCTAGCTGCCGTTTTTGA
JMFF026I20- TCGACACGCGATCTTCGCCGTCGCCGGAATCCGGTTGTGGGCGCTAGCTGCCGTTTTTGA
rJMFF026I20+ TNGACACGCGATCTTNGCCGTCGCCGGAATCCGGTTGTGGGCGNTAGCTGCCGTTTTTGA
rJMFF039C15+ TNGACACGCGATCTTNGCCGTCGCCGGAATCCGGTTGTGGGCGCTAGCTGCCGTTTTTGA
                      ____________________________________________________________
consensus TCGACACGCGATCTTCGCCGTCGCCGGAATCCGGTTGTGGGCGCTAGCTGCCGTTTTTGA
 
. : . : . : . : . : . :
JMFF039C15- CGAAGATGCCATACGTCTGGTTTTCCCTCCTCCAG
JMFF026I20- CGAAGATGCCATACGTCTGGTTTTCCCTCCTCCAGTAGCCCACCGGACGACGTTGGGCAC
rJMFF026I20+ CGAAGATGCCATACGTCTGGTTTTCCCTCCTCCAGTAGCCCACCGGACGACGTTGGGCAC
rJMFF039C15+ CGAAGATGCCATACGTCTGGTTTTCCCTCCTCCAGTAGCCCACCGGACGACGTTGGGCAC
                      ____________________________________________________________
consensus CGAAGATGCCATACGTCTGGTTTTCCCTCCTCCAGTAGCCCACCGGACGACGTTGGGCAC
 
. : . : . : . : . : . :
JMFF026I20- TTGGTATTTGAACCATCTTAGCCAGGGTATGACAGATCCCTCAGGACAGCAGATTCAAGA
rJMFF026I20+ TTGGTATTTGAACCATCTTAGCCAGGGTATGACAGATCCCTCAGGACAGCAGATTCAAGA
rJMFF039C15+ TTGGTATTTGAACCATCTTAGCCAGGGTATGACAGATCCCTCAGGACAGCAGATTCAAGA
                      ____________________________________________________________
consensus TTGGTATTTGAACCATCTTAGCCAGGGTATGACAGATCCCTCAGGACAGCAGATTCAAGA
 
. : . : . : . : . : . :
JMFF026I20- TCTTTCGACAGTAATACGATTGGCAGATGTCAATACAAGTAATATATGTTCACTCCTTGT
rJMFF026I20+ TCTTTCGACAGTAATACGATTGGCAGATGTCAATACAAGTAATATATGTTCACTCCTTGT
rJMFF039C15+ TCTTTCGACAGTAATACGATTGGCAGATGTCAATACAAGTAATATATGTTCACTCCTTGT
                      ____________________________________________________________
consensus TCTTTCGACAGTAATACGATTGGCAGATGTCAATACAAGTAATATATGTTCACTCCTTGT
 
. : . : . : . : . : . :
JMFF026I20- AAAAACTAAA
rJMFF026I20+ AAAAACTAAAAAAAAGTTGTTGTAAACACCAGATCNTAACACCTACATATATTTAAAAAA
rJMFF039C15+ AAAAACTAAAAAAAAGTTGTTGTAAACACCAGATCCTAACACCTACATATATTTAAAAAA
                      ____________________________________________________________
consensus AAAAACTAAAAAAAAGTTGTTGTAAACACCAGATCCTAACACCTACATATATTTAAAAAA
 
. : . : . : . : . : . :
rJMFF026I20+ GATGCAATAGGATTCAATTGTGATTTGAAATTCATAGGACCGGCCCGGTTACTCCTCACC
rJMFF039C15+ GATGCAATAGGATTCAATTGTGATTTGAAATTCATAGGACCGGCCCGGTTACTCCTCACC
                      ____________________________________________________________
consensus GATGCAATAGGATTCAATTGTGATTTGAAATTCATAGGACCGGCCCGGTTACTCCTCACC