Contig 002650:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF020G12+                                                AATGAGAGGTTTGATCAGAGTA
                      ____________________________________________________________
consensus                                                   AATGAGAGGTTTGATCAGAGTA
 
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rJMSF020G12+          GCCATGAGAGAAAGGTGTCAAGGTCCAGATCTGTTGGGTGTGGGAGCAGGAGCTTCTCAG
rJMFF039B24+                                                       GCAGGAGCTTCTCAG
                      ____________________________________________________________
consensus             GCCATGAGAGAAAGGTGTCAAGGTCCAGATCTGTTGGGTGTGGGAGCAGGAGCTTCTCAG
 
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rJMSF020G12+          GGGAGTTCTTTGAGAGAATCTCAACTGGTTTTGGGGACTGCACTCTAAGAAGAGTTGAGT
rJMFF039B24+          GGGAGTTCTTTGAGAGAATCTCAACTGGTTTTGGGGACTGCACTCTAAGAAGAGTTGAGT
                      ____________________________________________________________
consensus             GGGAGTTCTTTGAGAGAATCTCAACTGGTTTTGGGGACTGCACTCTAAGAAGAGTTGAGT
 
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rJMSF020G12+          CTCAGAGAGAAGGGAAGCCCAAAGCTCCCCCTTCTGTTCAACACAGGAACAGTGGGGCTT
rJMFF039B24+          CTCAGAGAGAAGGGAAGCCCAAAGCTCCCCCTTCTGTTCAACACAGGAACAGTGGGGCTT
                      ____________________________________________________________
consensus             CTCAGAGAGAAGGGAAGCCCAAAGCTCCCCCTTCTGTTCAACACAGGAACAGTGGGGCTT
 
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rJMSF020G12+          CTGGCCAAGATTGCATCAGGGAAAGAGTGAAATGTGGAGGGATTTTCAGTGGCTTCATGA
rJMFF039B24+          CTGGCCAAGATTGCATCAGGGAAAGAGTGAAATGTGGAGGGATTTTCAGTGGCTTCATGA
                      ____________________________________________________________
consensus             CTGGCCAAGATTGCATCAGGGAAAGAGTGAAATGTGGAGGGATTTTCAGTGGCTTCATGA
 
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rJMSF020G12+          TCATTGCATCTTCTTCATCTTCCTCATCAGATTGGGTTTCTTCTGAAGAGAATAAGGCCA
rJMFF039B24+          TCATTGCATCTTCTTCATCTTCCTCATCAGATTGGGTTTCTTCTGAAGAGAATAAGGCCA
                      ____________________________________________________________
consensus             TCATTGCATCTTCTTCATCTTCCTCATCAGATTGGGTTTCTTCTGAAGAGAATAAGGCCA
 
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rJMSF020G12+          CAAATAATCCTACAATCCCACCTGCATCTGTGGATCATCATGGAAGGAGCAAGAACTGGG
rJMFF039B24+          CAAATAATCCTACAATCCCACCTGCATCTGTGGATCATCATGGAAGGAGCAAGAACTGGG
                      ____________________________________________________________
consensus             CAAATAATCCTACAATCCCACCTGCATCTGTGGATCATCATGGAAGGAGCAAGAACTGGG
 
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rJMSF020G12+          GATGGGCACTTGCAAGTCCAATCAGAGCTTTTACCAGCAAGCCATCTACTGGGAAAACAG
rJMFF039B24+          GATGGGCACTTGCAAGTCCAATCAGAGCTTTTACCAGCAAGCCATCTACTGGGAAAACAG
                      ____________________________________________________________
consensus             GATGGGCACTTGCAAGTCCAATCAGAGCTTTTACCAGCAAGCCATCTACTGGGAAAACAG
 
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rJMSF020G12+          AAGCTTCAAACAAGAACACAACTCCCAACTTGGCTGCCATTCCTTCTTTGTTTACTGTCA
rJMFF039B24+          AAGCTTCAAACAAGAACACAACTCCCAACTTGGCTGCCATTCCTTCTTTGTTGACTGTCA
                      ____________________________________________________________
consensus             AAGCTTCAAACAAGAACACAACTCCCAACTTGGCTGCCATTCCTTCTTTGTTTACTGTCA
 
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rJMSF020G12+          GAAGCTAGAACAATGGCTTTGCCCCAATGGAGTAAATCACTATAGAAATTTTTTAAAATT
rJMFF039B24+          GAAGCTAGAACAATGGCTTTGCCCCAATGGAGTAAATCACTATAGAAATTTTTTAAAATT
                      ____________________________________________________________
consensus             GAAGCTAGAACAATGGCTTTGCCCCAATGGAGTAAATCACTATAGAAATTTTTTAAAATT
 
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rJMSF020G12+          TAATCCTCTTCCTTAAAATGTGTTTATTATTATTATTATCCTTGTTTGACAATGTTCAGT
rJMFF039B24+          TAATCCTCTTCTTTAAAATGTGTTTATTATTATTATTATCCTTGTTTGACAATGTTCAGT
                      ____________________________________________________________
consensus             TAATCCTCTTCTTTAAAATGTGTTTATTATTATTATTATCCTTGTTTGACAATGTTCAGT
 
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rJMSF020G12+          AACCTTTCCCTCCCTCCCTAAGTTGATATTTATGTCTATTTCATCTTTCTTTTACTGTCA
rJMFF039B24+          AACCTTTCCCTCCCTCCCTAAGTTGATATTTATGTCTATTTCATCTTTCTTTTACTGTCA
                      ____________________________________________________________
consensus             AACCTTTCCCTCCCTCCCTAAGTTGATATTTATGTCTATTTCATCTTTCTTTTACTGTCA
 
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rJMSF020G12+          ACACTGGGTTTGGATTCCATTCATGGAGTTCATGTCTGTTTCCATAACCACCTGATTCTT
rJMFF039B24+          ACACTGGGTTTGGATTCCATTCATGGAGTTCATGTCTGTTTCCATAACCACCTGATTCTT
                      ____________________________________________________________
consensus             ACACTGGGTTTGGATTCCATTCATGGAGTTCATGTCTGTTTCCATAACCACCTGATTCTT
 
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rJMSF020G12+          GGATGTGATGATCCAATCCAGTTAT                                   
rJMFF039B24+          GGATGTGATGATCCAATCCAGTTATGTAATTTGCTCATAGCAACATTATCATCAATAAGA
                      ____________________________________________________________
consensus             GGATGTGATGATCCAATCCAGTTATGTAATTTGCTCATAGCAACATTATCATCAATAAGA