Contig 002646:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF037G13Sequence703002646 (2)ref|XP_006338115.1|1e-41PREDICTED: uncharacterized protein LOC102597018 isoform X2 [Solanum tuberosum]
JMSF027P18Sequence631007922 (2)ref|XP_009797848.1|4e-43PREDICTED: uncharacterized protein LOC104244185 isoform X1 [Nicotiana sylvestri729002646 (2)ref|XP_006338115.1|3e-50PREDICTED: uncharacterized protein LOC102597018 isoform X2 [Solanum tuberosum]

Alignment

This contig is upended


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rJMSF027P18+                                    TAGAAATGGATCTACTAAAATTGGTCGGCCCGCA
                      ____________________________________________________________
consensus                                       TAGAAATGGATCTACTAAAATTGGTCGGCCCGCA
 
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rJMSF027P18+          TCGGGCAATGCTAAGGGAGAAAGGAAGCCTAAAGCAAAACCCAAGCAGAAAACTACTCAG
rJMFF037G13+                           AGAAAGGAAGCNTAAAGCAAAACCCAAGCAGAAAACTACTCAG
                      ____________________________________________________________
consensus             TCGGGCAATGCTAAGGGAGAAAGGAAGCCTAAAGCAAAACCCAAGCAGAAAACTACTCAG
 
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rJMSF027P18+          CTCTCTACTTCTCTCAATGGTCTAGTTGGCAAGATACCGGAGCAATCCAAGCCAACAGGG
rJMFF037G13+          CTCTCTACTTCTCTCAATGGTCTAGTTGGCAAGATACCGGAGCAATCCAAGCCAACAGGG
                      ____________________________________________________________
consensus             CTCTCTACTTCTCTCAATGGTCTAGTTGGCAAGATACCGGAGCAATCCAAGCCAACAGGG
 
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rJMSF027P18+          CCTTCAATAGCAAAAGCAAGTGAGTTTAGCTCAAATGGCACTCCCAAGGATAAGAATGAC
rJMFF037G13+          CNTTCAATAGCAAAAGCAAGTGAGTTTAGCTCAAATGGCACTCCCAAGGATAAGAATGAC
                      ____________________________________________________________
consensus             CCTTCAATAGCAAAAGCAAGTGAGTTTAGCTCAAATGGCACTCCCAAGGATAAGAATGAC
 
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rJMSF027P18+          TGTAACTCTGAAGAATTGGAGGACCCCATTGATTTATCTGGATTACAACTACCCGGAATG
rJMFF037G13+          TGTAACTCTGAAGAATTGGAGGACCCCATTGATTTATCTGGATTACAACTACCCGGAATG
                      ____________________________________________________________
consensus             TGTAACTCTGAAGAATTGGAGGACCCCATTGATTTATCTGGATTACAACTACCCGGAATG
 
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rJMSF027P18+          GATGTTTTAGGTGTTCCTGAGGATCTTGGTGGCCAGGGACAGGATATAGGATCTTGGTTG
rJMFF037G13+          GATGTTTTAGGTGTTCCTGAGGATCTTGGTGGCCAGGGACAGGATATAGGATCTTGGTTG
                      ____________________________________________________________
consensus             GATGTTTTAGGTGTTCCTGAGGATCTTGGTGGCCAGGGACAGGATATAGGATCTTGGTTG
 
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rJMSF027P18+          AACTTTGATGATGATGGATTACAAGATCATGATTTCATGGGACTTGAGATTCCAATGGAT
rJMFF037G13+          AACTTTGATGATGATGGATTACAAGATCATGATTTCATGGGACTTGAGATTCCAATGGAT
                      ____________________________________________________________
consensus             AACTTTGATGATGATGGATTACAAGATCATGATTTCATGGGACTTGAGATTCCAATGGAT
 
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rJMSF027P18+          GATCTCTCAGACTTGAATATGCTAGTTTGAAGTTGCATTTGTTGTATATTCCTGTTCATT
rJMFF037G13+          GATCTCTCAGACTTGAATATGCTAGTTTGAAGTTGCATTTGTTGTATATTCCTGTTCATT
                      ____________________________________________________________
consensus             GATCTCTCAGACTTGAATATGCTAGTTTGAAGTTGCATTTGTTGTATATTCCTGTTCATT
 
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rJMSF027P18+          ATACGCTCACAGAAGAAACCTCGTTGTTGTTGAGAATGCCCAGATACATGTGGGTCATGC
rJMFF037G13+          ATACGCTCACAGAAGAAACCTCGTTGTTGTTGAGAATGCCCAGATACATGTGGGTCATGC
                      ____________________________________________________________
consensus             ATACGCTCACAGAAGAAACCTCGTTGTTGTTGAGAATGCCCAGATACATGTGGGTCATGC
 
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rJMSF027P18+          GACTGTTACATCCATTATTAGGGGTATACATTCTTTTAAACAATCGTGCGCAAGTCCACT
rJMFF037G13+          GACTGTTACATCCATTATTAGGGGTATACATTCTTTTAAACAATCGTGCGCAAGTCCACT
                      ____________________________________________________________
consensus             GACTGTTACATCCATTATTAGGGGTATACATTCTTTTAAACAATCGTGCGCAAGTCCACT
 
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rJMSF027P18+          TTGAGTGAACCCTTCAAATCCTGTGGGTTTGTTCCTTAAGTTTATGACTTCGACTGTAAA
rJMFF037G13+          TTGAGTGAACCCTTCAAATCCTGTGGGTTTGTTCCTTAAGTTTATGACTTCGACTGTAAA
                      ____________________________________________________________
consensus             TTGAGTGAACCCTTCAAATCCTGTGGGTTTGTTCCTTAAGTTTATGACTTCGACTGTAAA
 
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rJMSF027P18+          GATCTTTTTGTACAACATCAAAGCTAGTATCTTAGTTATAGTGTCTTAGAAAAAGCTGTA
rJMFF037G13+          GATCTTTTTGTACAACATCAAAGCTAGTATCTTAGTTATAGTGTCTTAGAAAAAGCTGTA
                      ____________________________________________________________
consensus             GATCTTTTTGTACAACATCAAAGCTAGTATCTTAGTTATAGTGTCTTAGAAAAAGCTGTA
 
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rJMSF027P18+          TTTTGGTTTTAGCAATACAGGCCAGGGGACATCTC                         
rJMFF037G13+          TTTTGGTTTTAGCAATACAGGCCAGGGGACATCTCTGTATATAAGTTAATTTCAATAAAA
                      ____________________________________________________________
consensus             TTTTGGTTTTAGCAATACAGGCCAGGGGACATCTCTGTATATAAGTTAATTTCAATAAAA