Contig 002644:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFF037A13-                                 AATTCATAGATATAGAGAGAGATGAAAGGGGTTTCGAG
rJMSF052F19+                                     ATAGATATAGAGAGAGATGAAAGGGGTTTCGAG
                      ____________________________________________________________
consensus                                   AATTCATAGATATAGAGAGAGATGAAAGGGGTTTCGAG
 
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JMFF037A13-           TGGACAAATTCTTGTACTAATTTTTCTCGTTTCACTCGTCTTAACCTCCGGCGTACGTCC
rJMSF052F19+          TGGACAAATTCTTGTACTAATTTTTCTCGTTTCACTCGTCTTAACCTCCGGCGTACGTCC
                      ____________________________________________________________
consensus             TGGACAAATTCTTGTACTAATTTTTCTCGTTTCACTCGTCTTAACCTCCGGCGTACGTCC
 
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JMFF037A13-           GGCGACGGCGGCAAGGGCCGTAGCCGCCGGAACGACGACAAACACGGAGTTCATTAGAAC
rJMSF052F19+          GGCGACGGCGGCAAGGGCCGTAGCCGCCGGAACGACGACAAACACGGAGTTCATTAGAAC
rJMFF037A13+              ACGGCGGCAAGGGCCGTAGCCGCCGGAACGACGACAAACACGGAGTTCATTAGAAC
                      ____________________________________________________________
consensus             GGCGACGGCGGCAAGGGCCGTAGCCGCCGGAACGACGACAAACACGGAGTTCATTAGAAC
 
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JMFF037A13-           AAGTTGCAAGGCAACGACGTACCCAGATTTATGTTACTCCTCTCTGTCAATCCATGCAAG
rJMSF052F19+          AAGTTGCAAGGCAACGACGTACCCAGATTTATGTTACTCCTCTCTGTCAATCCATGCAAG
rJMFF037A13+          AAGTTGCAAGGCAACGACGTACCCAGATTTATGTTACTCCTNTCTGTCAATCCATGCAAG
                      ____________________________________________________________
consensus             AAGTTGCAAGGCAACGACGTACCCAGATTTATGTTACTCCTCTCTGTCAATCCATGCAAG
 
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JMFF037A13-           CGCCATCGGAGCCGACCCGGAGCTTTTAGCCCACACGGCGCTCGACGTGGCGCTGGAGAG
rJMSF052F19+          CGCCATCGGAGCCGACCCGGAGCTTTTAGCCCACANGGCGCTCGACGTGGCGCTGGAGAG
rJMFF037A13+          CGCCATCGGAGCCGACCCGGAGCTTTTAGCCCACACGGCGCTCGACGTGGCGCTGGAGAG
                      ____________________________________________________________
consensus             CGCCATCGGAGCCGACCCGGAGCTTTTAGCCCACACGGCGCTCGACGTGGCGCTGGAGAG
 
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JMFF037A13-           CGCGCAATCGACGTCGGCCGAGATGGTGAAGATCGCCGGCCGGCGCAACCTGACGCCGAG
rJMSF052F19+          CGCGCAATCGACGTCGGCCGAGATGGTGAAGATCGCCGGCCGGCGCAACCTGACGCCGAG
rJMFF037A13+          CGCGCAATCGACGTCGGCCGAGATGGTGAAGATCGCCGGCCGGCGCAACCTGACGCCGAG
                      ____________________________________________________________
consensus             CGCGCAATCGACGTCGGCCGAGATGGTGAAGATCGCCGGCCGGCGCAACCTGACGCCGAG
 
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JMFF037A13-           GGAGATAGGCGCCATGCAAGACTGCGTGGAAGAAGTCGGCGATTCCGTCGCCGAAATCAA
rJMSF052F19+          GGAGATAGGCGCCATGCAAGACTGCGTGGAAGAAGTCGGCGATTCCGTCGCCGAAATCAA
rJMFF037A13+          GGAGATAGGCGCCATGCAAGACTGCGTGGAAGAAGTCGGCGATTCCGTCGCCGAAATCAA
                      ____________________________________________________________
consensus             GGAGATAGGCGCCATGCAAGACTGCGTGGAAGAAGTCGGCGATTCCGTCGCCGAAATCAA
 
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JMFF037A13-           ACGGTCTCTGGGAGAAATGAAGCAGATGAAAGGTCCGGATTTCGGGATGAAAATCAGCGA
rJMSF052F19+          ACGGTCTCTGGGAGAAATGAAGCAGATGAAAGGTCCGGATTTCGGGATGAAAATCAGCGA
rJMFF037A13+          ACGGTCTCTGGGAGAAATGAAGCAGATGAAAGGTCCGGATTTCGGGATGAAAATCAGCGA
                      ____________________________________________________________
consensus             ACGGTCTCTGGGAGAAATGAAGCAGATGAAAGGTCCGGATTTCGGGATGAAAATCAGCGA
 
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JMFF037A13-           CATACANACGTGGGTGAGCGCCGCCTTGACGGACGAGAACACGTGCACCGAC        
rJMSF052F19+          CATACAGACGTGGGTGAGCGCCGCCTTGACGGACGAGAACACGTGCACCGACGGGTTCGC
rJMFF037A13+          CATACAGACGTGGGTGAGCGCCGCCTTGACGGACGAGAACACGTGCACCGACGGGTTCGC
                      ____________________________________________________________
consensus             CATACAGACGTGGGTGAGCGCCGCCTTGACGGACGAGAACACGTGCACCGACGGGTTCGC
 
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rJMSF052F19+          CGGAAAAGCCATGAGCGGCGAGGTGAAGACGGTCGTCGGGGAAAAGATTGTGAAGGTGGC
rJMFF037A13+          CGGAAAAGCCATGAGCGGCGAGGTGAAGACGGTCGTCGGGGAAAAGATTGTGAAGGTGGC
                      ____________________________________________________________
consensus             CGGAAAAGCCATGAGCGGCGAGGTGAAGACGGTCGTCGGGGAAAAGATTGTGAAGGTGGC
 
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rJMSF052F19+          GCATATGACTAGCAACGCCTTGGCTTTAGTCAACAGCTTCGCAGCTCTCCACAACTAATT
rJMFF037A13+          GCATATGACTAGCAACGCCTTGGCTTTAGTCAACAGCTTCGCAGCTCTCCACAACTAATT
                      ____________________________________________________________
consensus             GCATATGACTAGCAACGCCTTGGCTTTAGTCAACAGCTTCGCAGCTCTCCACAACTAATT
 
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rJMSF052F19+          ATTAGGTTCAACATCATATTTTTAATTACTCCGTATATTGTATGTTTAATATATCATTAG
rJMFF037A13+          ATTAGGTTCAACATCATATTTTTAATTACTCCGTATATTGTATGTTTAATATATCATTAG
                      ____________________________________________________________
consensus             ATTAGGTTCAACATCATATTTTTAATTACTCCGTATATTGTATGTTTAATATATCATTAG
 
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rJMSF052F19+          AAAATCATTAGCTCTAGCTTGTATNTGATTAATTAAGGATATAATTAGGAATGA      
rJMFF037A13+          AAAATCATTAGCTCTAGCTTGTATGTGATTAATTAAGGATATAATTAGGAATGATGCTTG
                      ____________________________________________________________
consensus             AAAATCATTAGCTCTAGCTTGTATGTGATTAATTAAGGATATAATTAGGAATGATGCTTG