| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF003O03 | Sequence | 515 | 002643 (6) | ref|XP_006363858.1| | 187 | PREDICTED: uncharacterized protein LOC102578855 [Solanum tuberosum] | 751 | 002643 (6) | ref|XP_002326109.2| | 5e-112 | hypothetical protein POPTR_0019s10280g [Populus trichocarpa] gb|EEF00491.2| hypo |
| JMFF036P01 | Sequence | 557 | 002643 (6) | ref|XP_006363858.1| | 238 | PREDICTED: uncharacterized protein LOC102578855 [Solanum tuberosum] | 654 | 002643 (6) | ref|XP_002326109.2| | 2e-82 | hypothetical protein POPTR_0019s10280g [Populus trichocarpa] gb|EEF00491.2| hypo |
| JMSF041J18 | Sequence | 680 | 002643 (6) | ref|XP_006363858.1| | 307 | PREDICTED: uncharacterized protein LOC102578855 [Solanum tuberosum] | 573 | 002643 (6) | ref|XP_006363858.1| | 189 | PREDICTED: uncharacterized protein LOC102578855 [Solanum tuberosum] |
This contig is upended
. : . : . : . : . : . :
JMFF003O03- ATAGTCACACAATCTTAAAACCTCTATCCCTGAAAAATAGCCCAT
____________________________________________________________
consensus ATAGTCACACAATCTTAAAACCTCTATCCCTGAAAAATAGCCCAT
. : . : . : . : . : . :
JMFF003O03- CACCAAATAAATGGCCACCGCCGCGCCCAAACTCGCCACCGGCATTCTACCCATCCCTGC
JMFF036P01- CCAAATAAATGGCCACCGCCGCGCCCAAACTCGCCACCGGCATTCTACCCATCCCTGC
JMSF041J18- CCAAATAAATGGCCACCGCCGCGCCCAAACTCGCCACCGGCATTCTACCCATCCCTGC
____________________________________________________________
consensus CACCAAATAAATGGCCACCGCCGCGCCCAAACTCGCCACCGGCATTCTACCCATCCCTGC
. : . : . : . : . : . :
JMFF003O03- CCAGCCCCACCGCCGTAAACCATTAGCCCCCCTACACCCCCTCGCCGGCACCGCTACTAG
JMFF036P01- CCAGCCCCACCGCCGTAAACCATTAGCCCCCCTACATCCCCTCGCCGGCACCGCTACTAG
JMSF041J18- CCAGCCCCACCGCCGTAAACCATTAGCCCCCCTACATCCCCTCGCCGGCACCGCTACTAG
____________________________________________________________
consensus CCAGCCCCACCGCCGTAAACCATTAGCCCCCCTACATCCCCTCGCCGGCACCGCTACTAG
. : . : . : . : . : . :
JMFF003O03- TGTACAACCCTCAGCCTTCAAAATCTCCGTCAGCACTGTTACTGGGGTTTCACGTCGCCG
JMFF036P01- TGTACAACCCTCAGCCTTCAAAATCTCCGTCAGCACTGTTACTGGGGTTTCACGTCGCCG
JMSF041J18- TGTACAACCCTCAGCCTTCAAAATCTCCGTCAGCACTGTTACTGGGGTTTCACGTCGCCG
____________________________________________________________
consensus TGTACAACCCTCAGCCTTCAAAATCTCCGTCAGCACTGTTACTGGGGTTTCACGTCGCCG
. : . : . : . : . : . :
JMFF003O03- GAGAGGGTTCACTTGCCAGGCCGCAGAGGTGTCGGTGGCGGAGGGGCCGTCGGCGTCGGG
JMFF036P01- GAGAGGGTTCACTTGCCAGGCCGCAGAGGTGTCGGTGGCGGAGGGGCCGTCGGCGTCGGG
JMSF041J18- GAGAGGGTTCACTTGCCAGGCCGCAGAGGTGTCGGTGGCGGAGGGGCCGTCGGCGTCGGG
rJMFF003O03+ GGG
____________________________________________________________
consensus GAGAGGGTTCACTTGCCAGGCCGCAGAGGTGTCGGTGGCGGAGGGGCCGTCGGCGTCGGG
. : . : . : . : . : . :
JMFF003O03- AGGTGGGAACTGGGTGCCGGTTGTGCCCCTGGGGGCGCTGCCGAAAGGAGAGCGGCGCGT
JMFF036P01- AGGTGGGAACTGGGTGCCGGTTGTGCCCCTGGGGGCGCTGCCGAAAGGAGAGCGGCGCGT
JMSF041J18- AGGTGGGAACTGGGTGCCGGTTGTGCCCCTGGGGGCGCTGCCGAAAGGAGAGCGGCGCGT
rJMFF003O03+ AGGTGGGAACTGGGTGCCGGTTGTGCCCCTGGGGGCGCTGCCGAAAGGAGAGCGGCGCGT
____________________________________________________________
consensus AGGTGGGAACTGGGTGCCGGTTGTGCCCCTGGGGGCGCTGCCGAAAGGAGAGCGGCGCGT
. : . : . : . : . : . :
JMFF003O03- GATCATCCAAAACGGGGAGACCATACTGCTGCTTTGGTATAAAGATGACATCTTTGCCAT
JMFF036P01- GATCATCCAAAACGGGGAGACCATACTGCTGCTTTGGTATAAAGATGACATCTTTGCCAT
JMSF041J18- GATCATCCAAAACGGGGAGACCATACTGCTGCTTTGGTATAAAGATGACATCTTTGCCAT
rJMFF003O03+ GATCATCCAAAACGGGGAGACCATACTGCTGCTTTGGTATAAAGATGACATCTTTGCCAT
____________________________________________________________
consensus GATCATCCAAAACGGGGAGACCATACTGCTGCTTTGGTATAAAGATGACATCTTTGCCAT
. : . : . : . : . : . :
JMFF003O03- CGAGAACCGATCCCCTGCTGAAGGCGCGTACAGTGAAGGCCTCCTCAATGCCAAGCTCAC
JMFF036P01- CGAGAACCGATCCCCTGCTGAAGGCGCGTACAGTGAAGGCCTCCTCAATGCCAAGCTCAC
JMSF041J18- CGAGAACCGATCCCCTGCTGAAGGCGCGTACAGTGAAGGCCTCCTCAATGCCAAGCTCAC
rJMFF003O03+ CGAGAACCGATCCCCTGCTGAAGGCGCGTACAGTGAAGGCCTCCTCAATGCCAAGCTCAC
rJMFF036P01+ ACCGATCCCCTGCTGAAGGCGCGTACAGTGAAGGCCTCCTCAATGCCAAGCTCAC
____________________________________________________________
consensus CGAGAACCGATCCCCTGCTGAAGGCGCGTACAGTGAAGGCCTCCTCAATGCCAAGCTCAC
. : . : . : . : . : . :
JMFF003O03- CCAGGATGGTTGTATCGTTTGCCCAACAACTGATAGCACATTTGACTTGC
JMFF036P01- CCAGGATGGTTGTATCGTTTGCCCAACAACTGATAGCACATTTGACTTGCGAACCGGAG-
JMSF041J18- CCAGGATGGTTGTATCGTTTGCCCAACAACTGATAGCACATTTGACTTGCGAACCGGAG-
rJMFF003O03+ CCAGGATGGTTGTATCGTTTGCCCAACAACTGATAGCACATTTGACTTGCGAACCGGAG-
rJMSF041J18+ AACTGATAGCACATTTGACTTGCGAACCGGAGA
rJMFF036P01+ CCAGGATGGTTGTATCGTTTGCCCAACAACTGATAGCACATTTGACTTGCGAACCGGAG-
____________________________________________________________
consensus CCAGGATGGTTGTATCGTTTGCCCAACAACTGATAGCACATTTGACTTGCGAACCGGAG-
. : . : . : . : . : . :
JMFF036P01- AAATAAAAGAATGGTACCCAAAGAATCCAGTCCTGAGAGTTCTGACTCCTGCATTGAGAT
JMSF041J18- AAATAAAAGAATGGTACCCAAAGAATCCAGTCCTGAGAGTTCTGACTCCTGCATTGAGAT
rJMFF003O03+ AAATAAAAGAATGGTACCCAAAGAATCCAGTCCTGAGAGTTNTGACTCCTGCATTGAGAT
rJMSF041J18+ AAATAAAAGAATGGTACCCAAAGAATCCAGTCCTGAGAGTTCTGACTCCTGCATTGAGAT
rJMFF036P01+ AAATAAAAGAATGGTACCCAAAGAATCCAGTCCTGAGAGTTNTGACTCCTGCATTGAGAT
____________________________________________________________
consensus AAATAAAAGAATGGTACCCAAAGAATCCAGTCCTGAGAGTTCTGACTCCTGCATTGAGAT
. : . : . : . : . : . :
JMFF036P01- CCCTATTTACTTACCCCGT
JMSF041J18- CCCTATTTACTTACCCCGTTAAGACGGACAGCGAAAACATTTACATCAGCATGAGCGGGG
rJMFF003O03+ CCCTATTTACTTACCCCGTTAAGACGGACAGCGAAAACATTTACATCAGCATGAGCGGGG
rJMSF041J18+ CCCTATTTACTTACCCCGTTAAGACGGACAGCGAAAACATTTACATCAGCNTGAGCGGGG
rJMFF036P01+ CCCTATTTACTTACCCCGTTAAGACGGACAGCGAAAACATTTACATCAGCATGAGCGGGG
____________________________________________________________
consensus CCCTATTTACTTACCCCGTTAAGACGGACAGCGAAAACATTTACATCAGCATGAGCGGGG
. : . : . : . : . : . :
JMSF041J18- GACTGAAGGATGCATCTGCTGAGATTGTATTCAGCGGGAAGGCTCAACCTGGTGTAACAG
rJMFF003O03+ GACTGAAGGATGCATNTGCTGAGATTGTATTCAGCGGGAAGGCTCAACCTGGTGTAACAG
rJMSF041J18+ GACTGAAGGATGCATCTGCTGAGATTGTATTCAGCGGGAAGGCTCAACCTGGTGTAACAG
rJMFF036P01+ GACTGAAGGATGCATNTGCTGAGATTGTATTCAGCGGGAAGGCTCAACCTGGTGTAACAG
____________________________________________________________
consensus GACTGAAGGATGCATCTGCTGAGATTGTATTCAGCGGGAAGGCTCAACCTGGTGTAACAG
. : . : . : . : . : . :
JMSF041J18- CAACCAATGTCAACGTGGATG
rJMFF003O03+ CAACCAATGTCAACGTGGATGAGGTGAGGATGGTGGTTGATGAGAGCCAAGAGGCCTTTG
rJMSF041J18+ CAACCAATGTCAACGTGGATGAGGTGAGGATGGTGGTTGATGAGAGCCAAGAGGCCTTTG
rJMFF036P01+ CAACCAATGTCAACGTGGATGAGGTGAGGATGGTGGTTGATGAGAGCCAAGAGGCCTTTG
____________________________________________________________
consensus CAACCAATGTCAACGTGGATGAGGTGAGGATGGTGGTTGATGAGAGCCAAGAGGCCTTTG
. : . : . : . : . : . :
rJMFF003O03+ GTTTCACGGGAAAGAATGAGTTGATAAATGGAAAAGCTGCTGTGATTGGGTTCCTATTGC
rJMSF041J18+ GTTTCACGGGAAAGAATGAGTTGATAAATGGAAAAGCTGCTGTGATTGGGTTCCTATTGC
rJMFF036P01+ GTTTCACGGGAAAGAATGAGTTGATAAATGGAAAAGCTGCTGTGATTGGGTTCCTATTGC
____________________________________________________________
consensus GTTTCACGGGAAAGAATGAGTTGATAAATGGAAAAGCTGCTGTGATTGGGTTCCTATTGC
. : . : . : . : . : . :
rJMFF003O03+ TGTTAGATTTCGAACTTNTGACTGGTAAAGGTCTCCTCAAAGGAACAGGATTNTTGGACT
rJMSF041J18+ TGTTAGATTTCGAACTTCTGACTGGTAAAGGTCTCCTCAAAGGAACNGGATTCTTGGACT
rJMFF036P01+ TGTTAGATTTCGAACTTNTGACTGGTAAAGGTNTCCTCAAAGGAACAGGATTNTTGGACT
____________________________________________________________
consensus TGTTAGATTTCGAACTTCTGACTGGTAAAGGTCTCCTCAAAGGAACAGGATTCTTGGACT
. : . : . : . : . : . :
rJMFF003O03+ TCATTTACTCTGTTTCCAATGCTTTCAAATGAATTCCAATGTAATTTATGAACACTTCTT
rJMSF041J18+ TCATTTACTCTGTTTCCAATGCTTTCAAATGAATTCCAATGTAATTTATGAACACTTCTT
rJMFF036P01+ TCATTTACTCTGTTTCCAATGCTTTCAAATGAATTCCAATGTAATTTATGAACACTTCTT
____________________________________________________________
consensus TCATTTACTCTGTTTCCAATGCTTTCAAATGAATTCCAATGTAATTTATGAACACTTCTT
. : . : . : . : . : . :
rJMFF003O03+ TGATCAACATATAGGCAGTATATTTGTTGGGAGTAGTTTAACTTCCTATAATAGCTGGAA
rJMSF041J18+ TGATCAACATATAGGCNGTATATTTGTTGGGAGTAGTTTAACTTCCTATAATAGCTGGAA
rJMFF036P01+ TGATCAACATATAGGCAGTATATTTGTTGGGAGTAGTTTAACTTCCTATAATAGCTGGAA
____________________________________________________________
consensus TGATCAACATATAGGCAGTATATTTGTTGGGAGTAGTTTAACTTCCTATAATAGCTGGAA
. : . : . : . : . : . :
rJMFF003O03+ AAATAATTAAAAAAAAAATAGAAAACA
rJMSF041J18+ AAATAATTAAAAAAAAAATAGAAAACAATGATTTTGTATATGTAGGTAAATTCTACTGAT
rJMFF036P01+ AAATAATTAAAAAAAAAATAGAAAACAATGATTTTGTATATGTAGGTAAATTCTACTGAT
____________________________________________________________
consensus AAATAATTAAAAAAAAAATAGAAAACAATGATTTTGTATATGTAGGTAAATTCTACTGAT