Contig 002640:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF046H05-                                                                    GAA
                      ____________________________________________________________
consensus                                                                      GAA
 
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JMFF036H04-                                      ATTTTTTGCGCTCGCCAACCCTTTATCACTCTC
JMSF046H05-           AAATGCATATACATTCAGATTCCACTCATTTTTTGCGCTCGCCAACCCTTTATCACTCTC
                      ____________________________________________________________
consensus             AAATGCATATACATTCAGATTCCACTCATTTTTTGCGCTCGCCAACCCTTTATCACTCTC
 
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JMFF036H04-           TTTCCTGCTAATTCTCCACCGTAAATATGAATAATCGCATAATTAATTCACTGTAATTGA
JMSF046H05-           TTTCCTGCTAATTCTCCACCGTAAATATGAATAATCGCATAATTAATTCACTGTAATTGA
                      ____________________________________________________________
consensus             TTTCCTGCTAATTCTCCACCGTAAATATGAATAATCGCATAATTAATTCACTGTAATTGA
 
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JMFF036H04-           TGCGCGCGTGTCGCCGAAGTGTAGATTTCAAGTATACGCACTCGTATATATATACGTATT
JMSF046H05-           TGCGCGCGTGTCGCCGAAGTGTAGATTTCAAGTATACGCACTCGTATATATATACGTATT
                      ____________________________________________________________
consensus             TGCGCGCGTGTCGCCGAAGTGTAGATTTCAAGTATACGCACTCGTATATATATACGTATT
 
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JMFF036H04-           TTGCAATTCACAGCAAGCACTCGAAAAGTGTAAGAAGGAATAGAGACTTCACGCTTCCAA
JMSF046H05-           TTGCAATTCACGGCAAGCACTCGAAAAGTGTAAGAAGGAATAGAGACTTCACGCTTCCAA
                      ____________________________________________________________
consensus             TTGCAATTCACGGCAAGCACTCGAAAAGTGTAAGAAGGAATAGAGACTTCACGCTTCCAA
 
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JMFF036H04-           GAAAATTCGCGGAATTTATAGAGCTGCGATTTGCGAATCCCTAAGCGGGTTTGCGGATTT
JMSF046H05-           GAAAATTCGCGGAATTTATAGAGCTGCGATTTGCGAATCCCTAAGCGGGTTTGCGGATTT
                      ____________________________________________________________
consensus             GAAAATTCGCGGAATTTATAGAGCTGCGATTTGCGAATCCCTAAGCGGGTTTGCGGATTT
 
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JMFF036H04-           GCAGCTGTAAAGCCGTTCTGCTTTGTTTGAAAAGCGAGATTTATCGATTCACTGTTTGGT
JMSF046H05-           GCAGCTGTAAAGCCGTTCTGCTTTGTTTGAAAAGCGATATTTATCGATTCACTGTTTGGT
                      ____________________________________________________________
consensus             GCAGCTGTAAAGCCGTTCTGCTTTGTTTGAAAAGCGATATTTATCGATTCACTGTTTGGT
 
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JMFF036H04-           TTTAGAGAGAAAGAGAGGGAGAGAGGGAGAGGAAGGATGTGGTGCAAAACGATAGTACTG
JMSF046H05-           TTTAGAGAGAAAGAGAGGGAGAGAGGGAGAGGAAGGATGTGGTGCAAAACGATAGTACTG
                      ____________________________________________________________
consensus             TTTAGAGAGAAAGAGAGGGAGAGAGGGAGAGGAAGGATGTGGTGCAAAACGATAGTACTG
 
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JMFF036H04-           AGCCGGAAAAGGAAGACGGGGGCGGTGCCGGTGTACCTGAACGTATATGATCTCA-CCCC
JMSF046H05-           AGCCGGAAAAGGAAGACGGGGGCGGTGCCGGTGTACCTGAACGTATATGATCTCA-CCCC
rJMSF046H05+                                CGGTGCCGGTGTACCTGAACGTATATGATCTCACCCCC
                      ____________________________________________________________
consensus             AGCCGGAAAAGGAAGACGGGGGCGGTGCCGGTGTACCTGAACGTATATGATCTCA-CCCC
 
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JMFF036H04-           AATCAATGGCTACGCTTACTGGTTCGGCCTAGGGGTTTACCACTCCGGCGTCCAAGTTCA
JMSF046H05-           AATCAATGGCTACGCTTACTGGTTCGGCCTAGGGGTTTACCACTCCGGCGTCCAAGTTCA
rJMSF046H05+          AATCAANGGCTACGCTTACTGGTTCGGCCTAGGGGTTTACCACTCCGGCGTCCAAGTTCA
rJMSF015A03+                                           GGTTTACCACTCCGGCGTCCAAGTTCA
                      ____________________________________________________________
consensus             AATCAATGGCTACGCTTACTGGTTCGGCCTAGGGGTTTACCACTCCGGCGTCCAAGTTCA
 
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JMFF036H04-           TGGGGT                                                      
JMSF046H05-           TGGGGTTGAATATGGTTTTGGTGCACATGAACATTCCACAACTGGCATATTTGAAGTAGA
rJMSF046H05+          TGGGGTTGAATATGGTTTTGGTGCACATGAACATTCCACAACTGGCATATTTGAAGTAGA
rJMSF015A03+          TGGGGTTGAATATGGTTNTGGTGCACATGNACATTCCACAACTGGCATATTTGAAGTAGA
rJMFF036H04+                                             CCACAACTGGCATATTTGAAGTAGA
                      ____________________________________________________________
consensus             TGGGGTTGAATATGGTTTTGGTGCACATGAACATTCCACAACTGGCATATTTGAAGTAGA
 
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JMSF046H05-           ACCAAAGCAGTGCCCGGGATTCACATTCAGAAAGTCAATACTCATTGGGAGAACTGACTT
rJMSF046H05+          ACCAAAGCAGTGCCCGGGATTCACATTCAGAAAGTCAATACTCATTGGGAGAACTGACTT
rJMSF015A03+          ACCAAAGCAGTGCCCGGGATTCACATTCAGAAAGTCAATACTCATTGGGAGAACTGANNT
rJMFF036H04+          ACCAAAGCAGTGCCCGGGATTCACATTCAGAAAGTCAATACTCATTGGGAGAACTGACTT
                      ____________________________________________________________
consensus             ACCAAAGCAGTGCCCGGGATTCACATTCAGAAAGTCAATACTCATTGGGAGAACTGACTT
 
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JMSF046H05-           GGGTCCGAAAGAGGTCCGTGCATTTATGGAGAAACTTGCAGAGGAGTATAGTGGCAACTC
rJMSF046H05+          GGGTCCGAAAGAGGTCCGTGCATTTATGGAGAAACTTGCAGAGGAGTATAGTGGCAACTC
rJMSF015A03+          GGGTCCGAAAGAGGTCCGTGCATNTATGGAGAAACTTGCAGAGGAGTATAGTGGCAACTC
rJMFF036H04+          GGGTCCGAAAGAGGTCCGTGCATTTATGGAGAAACTTGCAGAGGAGTATAGTGGCAACTC
                      ____________________________________________________________
consensus             GGGTCCGAAAGAGGTCCGTGCATTTATGGAGAAACTTGCAGAGGAGTATAGTGGCAACTC
 
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JMSF046H05-           GTACAATCTCATCACAAAAAACTGCAACCATTTTTGCAATGATGTATGCACCCGAT    
rJMSF046H05+          GTACAATCTCATCACAAAAAACTGCAACCATTTTTGCAATGATGTATGCACCCGATTGAC
rJMSF015A03+          GTACAATCTCATCACAAAAAACTGCAACCANTTTTGCAATGATGTATGCACCCGATTGAC
rJMFF036H04+          GTACAATCTCATCACAAAAAACTGCAACCATTTTTGCAATGATGTATGCACCCGATTGAC
                      ____________________________________________________________
consensus             GTACAATCTCATCACAAAAAACTGCAACCATTTTTGCAATGATGTATGCACCCGATTGAC
 
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rJMSF046H05+          AGGGAAACCAATTCCCAGATGGGTGAATCGGCTTGCTCGTCTTGGTTTTCTTTGCAATTG
rJMSF015A03+          AGGGAAACCAATTCCCAGATGGGNGAATCGGCTTGCTCGTCTTGGTNTTCTTTGCAATTG
rJMFF036H04+          AGGGAAACCAATTCCCAGATGGGTGAATCGGCTTGCTCGTCTTGGTTTTCTTTGCAATTG
                      ____________________________________________________________
consensus             AGGGAAACCAATTCCCAGATGGGTGAATCGGCTTGCTCGTCTTGGTTTTCTTTGCAATTG
 
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rJMSF046H05+          TGTCCTCCCAGCTGGCTTGAATGAGACAAAAGTTCGGCATGTTAAGGCTGAAGATAGATT
rJMSF015A03+          TGTCCTCCCAGCTGGCTTGAATGAGACAAAAGTTCGGCATGTTAAGGCTGAAGATAGATT
rJMFF036H04+          TGTCCTCCCAGCTGGCTTGAATGAGACAAAAGTTCGGCATGTTAAGGCTGAAGATAGATT
                      ____________________________________________________________
consensus             TGTCCTCCCAGCTGGCTTGAATGAGACAAAAGTTCGGCATGTTAAGGCTGAAGATAGATT
 
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rJMSF046H05+          GTCTGACAAGAAAAAGTTAAGAAGCCACTCGAGTAGGTTTGTAACTTCTTCCAATACCAA
rJMSF015A03+          GTCTGACAAGAAAAAGTTAAGAAGCCACTCGAGTAGGTTTGTAACTTCTTCCAATACCAA
rJMFF036H04+          GTCTGACAAGAAAAAGTTAAGAAGCCACTCGAGTAGGTTTGTAACTTCTTCCAATACCAA
                      ____________________________________________________________
consensus             GTCTGACAAGAAAAAGTTAAGAAGCCACTCGAGTAGGTTTGTAACTTCTTCCAATACCAA
 
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rJMSF046H05+          TATCATGCCTCCTCGTCCTACGAGGTCTGCAACAAGTAATAGAAGACAGAGAAGCCGTAA
rJMSF015A03+          TATCATGCCTCCTCGTCCTACGAGGTCTGCAACAAGTAATAGAAGACAGAGAAGCCGTAA
rJMFF036H04+          TATCATGCCTCCTCGTCCTACGAGGTCTGCAACAAGTAATAGAAGACAGAGAAGCCGTAA
                      ____________________________________________________________
consensus             TATCATGCCTCCTCGTCCTACGAGGTCTGCAACAAGTAATAGAAGACAGAGAAGCCGTAA
 
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rJMSF046H05+          TTCCCCATCCATGTCTTTGATTCGTTCTGCTTCCACTTCTCCCTCTACAATGGGGGTTTA
rJMSF015A03+          TTCCCCATCCATGTCTTTGATTCGTTCTGCTTCCACTTCTCCCTCTACAATGGGGGTTTA
rJMFF036H04+          TTCCCCATCCATGTCTTTGATTCGTTCTGCTTCCACTTCTCCCTCTACAATGGGGGTTTA
                      ____________________________________________________________
consensus             TTCCCCATCCATGTCTTTGATTCGTTCTGCTTCCACTTCTCCCTCTACAATGGGGGTTTA
 
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rJMSF046H05+          GTGACATTTTAATATCCGGACTAAACAGGTTTGAATATAGTTGAAGGAAAAAAGTAGGAT
rJMSF015A03+          GTGACATTTTAATATCCGGACTAAACAGGTTTGAATATAGTTGAAGGAAAAAAGTAGGAT
rJMFF036H04+          GTGACATTTTAATATCCGGACTAAACAGGTTTGAATATAGTTGAAGGAAAAAAGTAGGAT
                      ____________________________________________________________
consensus             GTGACATTTTAATATCCGGACTAAACAGGTTTGAATATAGTTGAAGGAAAAAAGTAGGAT
 
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rJMSF046H05+          GAATATCTTGATGTTCTTCCCGTTTCCTTGGTAGGTTAATTTATCATTTCCTCAAATGAA
rJMSF015A03+          GAATATCTTGATGTTCTTCCCGTTTCCTTGGTAGGTTAATTTATCATTTCCTCAAATGAA
rJMFF036H04+          GAATATCTTGATGTTCTTCCCGTTTCCTTGGTAGGTTAATTTATCATTTCCTCAAATGAA
                      ____________________________________________________________
consensus             GAATATCTTGATGTTCTTCCCGTTTCCTTGGTAGGTTAATTTATCATTTCCTCAAATGAA
 
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rJMSF046H05+          AACAGAAAAGGCTGCTTGGAAAAACACTGCGGCTTTTCTGTTTCTGTAAATTAGCT    
rJMSF015A03+          AACAGAAAAGGCTGCTTGGAAAAACNCTGCGGCTTTNCTGTTTCTGTNAATTAGCT    
rJMFF036H04+          AACAGAAAAGGCTGCTTGGAAAAACACTGCGGCTTTTCTGTTTCTGTAAATTAGCTTGCA
                      ____________________________________________________________
consensus             AACAGAAAAGGCTGCTTGGAAAAACACTGCGGCTTTTCTGTTTCTGTAAATTAGCTTGCA
 
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rJMFF036H04+          ACTCATTTAAATTTTCACCAGTGTGCAAAATTCTAAGATTTCTGAACTGACATGGACACT
                      ____________________________________________________________
consensus             ACTCATTTAAATTTTCACCAGTGTGCAAAATTCTAAGATTTCTGAACTGACATGGACACT