Contig 002634:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF002H14Sequence534002634 (10)ref|XP_004146887.1|6e-93PREDICTED: 60S ribosomal protein L13-2-like isoform 1 [Cucumis sativus] ref|XP_760002634 (10)ref|XP_011084605.1|1e-103PREDICTED: 60S ribosomal protein L13-1 [Sesamum indicum]
JMFF020J09Sequence533002634 (10)ref|XP_011084605.1|5e-91PREDICTED: 60S ribosomal protein L13-1 [Sesamum indicum]738002634 (10)ref|XP_011084605.1|6e-104PREDICTED: 60S ribosomal protein L13-1 [Sesamum indicum]
JMFF035D10Sequence370002634 (10)ref|XP_007158142.1|2e-54hypothetical protein PHAVU_002G127900g [Phaseolus vulgaris] gb|ESW30136.1| hypot641002634 (10)ref|XP_011084605.1|2e-58PREDICTED: 60S ribosomal protein L13-1 [Sesamum indicum]
JMFF041H11Sequence648002634 (10)ref|XP_004146887.1|2e-116PREDICTED: 60S ribosomal protein L13-2-like isoform 1 [Cucumis sativus] ref|XP_631002634 (10)ref|XP_011084605.1|7e-86PREDICTED: 60S ribosomal protein L13-1 [Sesamum indicum]
JMSF023C20Sequence725002230 (5)ref|XP_009770858.1|1e-92PREDICTED: uncharacterized protein At4g14100-like isoform X1 [Nicotiana sylvest147002634 (10)ref|XP_004146887.1|2e-13PREDICTED: 60S ribosomal protein L13-2-like isoform 1 [Cucumis sativus] ref|XP_
JMSF027C12Sequence682011451 (24)gb|ADE42972.1|4e-92putative 60S ribosomal protein L18a [Gardenia jasminoides]728002634 (10)ref|XP_011084605.1|5e-104PREDICTED: 60S ribosomal protein L13-1 [Sesamum indicum]

Alignment

This contig is upended


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JMFF035D10-                        NNTGCTGCCGAGCAACAAAGCCGAAAGCTCCTTTACCTGTTTCTAGG
JMFF002H14-                                  AGCAACAAAGCCGAAAGCTCCTTTACCTGTTTCTAGG
JMFF041H11-                                  AGCAACAAAGCCGAAAGCTCCTTTACCTGTTTCTAGG
rJMFF002H14+                                                                   AGG
                      ____________________________________________________________
consensus                          NNTGCTGCCGAGCAACAAAGCCGAAAGCTCCTTTACCTGTTTCTAGG
 
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JMFF035D10-           TGAGTAATGAAACATAACAATGTTGTGCCCAGTGGGCACTTCAGGAAG-CACTGGCAGAA
JMFF020J09-                 ATGAAACATAACAATGTTGTGCCCAGTGGGCACTTCAGGAAG-CACTGGCAGAA
JMFF002H14-           TGAGTAATGAAACATAACAATGTTGTGCCCAGTGGGCACTTCAGGAAG-CACTGGCAGAA
JMFF041H11-           TGAGTAATGAAACATAACAATGTTGTGCCCAGTGGGCACTTCAGGAAG-CACTGGCAGAA
rJMFF002H14+          TGAGTAATGAAACATAACAATGTTGTGCCCAGTGGGCACTTCAGGAAGCCACTGGCAGAA
rJMSF027C12+                                                   CAGGAAG-CACTGGCAGAA
rJMFF020J09+                                                  TCAGGAAG-CACTGGCAGAA
                      ____________________________________________________________
consensus             TGAGTAATGAAACATAACAATGTTGTGCCCAGTGGGCACTTCAGGAAG-CACTGGCAGAA
 
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JMFF035D10-           CTATGTGAAGACATGGTTCAACCAACCTGCTCGCAAACAAAGGAGGAGAGCTGCTAGACA
JMFF020J09-           CTATGTGAAGACATGGTTCAACCAACCTGCTCGCAAACAAAGGAGGAGAGCTGCTAGACA
JMFF002H14-           CTATGTGAAGACATGGTTCAACCAACCTGCTCGCAAACAAAGGAGGAGAGCTGCTAGACA
JMFF041H11-           CTATGTGAAGACATGGTTCAACCAACCTGCTCGCAAACAAAGGAGGAGAGCTGCTAGACA
rJMFF002H14+          CTATGTGAAGACATGGTTCAACCAACCTGCTCGCAAACAAAGGAGGAGAGCTGCTAGACA
rJMSF027C12+          CTATGTGAAGACATGGTTCAACCAACCTGCTCGCAAACAAAGGAGGAGAGCTGCTAGACA
rJMFF020J09+          CTATGTGAAGACATGGTTCAACCAACCTGCTCGCAANCAAAGGAGGAGAGCTGCTAGACA
                      ____________________________________________________________
consensus             CTATGTGAAGACATGGTTCAACCAACCTGCTCGCAAACAAAGGAGGAGAGCTGCTAGACA
 
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JMFF035D10-           AAAAAAGGCTGTTAAGATTTTCCCCAGGCCAACTGCTGGAGCCCTTCGCCCAATTGTCCA
JMFF020J09-           AAAAAAGGCTGTTAAGATTTTCCCCAGGCCAACTGCTGGAGCCCTTCGCCCAATTGTCCA
JMFF002H14-           AAAAAAGGCTGTTAAGATTTTCCCCAGGCCAACTGCTGGAGCCCTTCGCCCAATTGTCCA
JMFF041H11-           AAAAAAGGCTGTTAAGATTTTCCCCAGGCCAACTGCTGGAGCCCTTCGCCCAATTGTCCA
rJMFF002H14+          AAAAAAGGCTGTTAAGATTTTCCCCAGGCCAACTGCTGGAGCCCTTCGCCCAATTGTCCA
rJMSF027C12+          AAAAAAGGCTGTTAAGATTTTCCCCAGGCCAACTGCTGGAGCCCTTCGCCCAATTGTCCA
rJMFF020J09+          AAAAAAGGCTGTTAAGATTTTCCCCAGGCCAACTGCTGGAGCCCTTCGCCCAATTGTCCA
rJMFF041H11+                                         ACTGCTGGAGCCCTTCGCCCAATTGTCCA
                      ____________________________________________________________
consensus             AAAAAAGGCTGTTAAGATTTTCCCCAGGCCAACTGCTGGAGCCCTTCGCCCAATTGTCCA
 
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JMFF035D10-           TGGGCAGACACTCAAGTACAACATGAAAGTCAGGGCTGGTAGGGGATTCTCCCTCGAGGA
JMFF020J09-           TGGGCAGACACTCAAGTACAACATGAAAGTCAGGGCTGGTAGGGGATTCTCCCTCGAGGA
JMFF002H14-           TGGGCAGACACTCAAGTACAACATGAAAGTCAGGGCTGGTAGGGGATTCTCCCTCGAGGA
JMFF041H11-           TGGGCAGACACTCAAGTACAACATGAAAGTCAGGGCTGGTAGGGGATTCTCCCTCGAGGA
rJMFF002H14+          TGGGCAGACACTCAAGTACAACATGAAAGTCAGGGCTGGTAGGGGATTCTCCCTCGAGGA
rJMSF027C12+          TGGGCAGACACTCAAGTACAACATGAAAGTCAGGGCTGGTAGGGGATTCTCCCTCGAGGA
rJMFF020J09+          TGGGCAGACACTCAAGTACAACATGAAAGTCAGGGCTGGTAGGGGATTCTCCCTCGAGGA
rJMFF041H11+          TGGGCAGACACTCAAGTACAACATGAAAGTCAGGGCTGGTAGGGGATTCTCCCTCGAGGA
                      ____________________________________________________________
consensus             TGGGCAGACACTCAAGTACAACATGAAAGTCAGGGCTGGTAGGGGATTCTCCCTCGAGGA
 
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JMFF035D10-           GCTTAAGGCTGCAGGTATCACAAAGAAACTGGCACCTACAATTGGCATCTCAGTTGATCA
JMFF020J09-           GCTTAAGGCTGCAGGTATCACAAAGAAACTGGCACCTACAATTGGCATCTCAGTTGATCA
JMFF002H14-           GCTTAAGGCTGCAGGTATCACAAAGAAACTGGCACCTACAATTGGCATCTCAGTTGATCA
JMFF041H11-           GCTTAAGGCTCCAGGTATCACAAAGAAACTGGCACCTACAATTGGCATCTCAGTTGATCA
rJMFF002H14+          GCTTAAGGCTGCAGGTATCACAAAGAAACTGGCACCTACAATTGGCATCTCAGTTGATCA
rJMSF027C12+          GCTTAAGGCTGCAGGTATCACAAAGAAACTGGCACCTACAATTGGCATCTCAGTTGATCA
rJMFF020J09+          GCTTAAGGCTGCAGGTATCACAAAGAAACTGGCACCTACAATTGGCATCTCAGTTGATCA
rJMFF041H11+          GCTTAAGGCTCCAGGTATCACAAAGAAACTGGCACCTACAATTGGCATCTCAGTTGATCA
rJMFF035D10+                             ACAAAGAAACTGGCACCTACAATTGGCATCTCAGTTGATCA
                      ____________________________________________________________
consensus             GCTTAAGGCTGCAGGTATCACAAAGAAACTGGCACCTACAATTGGCATCTCAGTTGATCA
 
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JMFF035D10-           CCGCCGTAGGAACAGTTCGCTTGA                                    
JMFF020J09-           CCGCCGTAGGAACAGTTCGCTTGAGGGTCTTCAGGCTAATGTTCAGAGGCTGAAGACTTA
JMFF002H14-           CCGCCGTAGGAACAGTTCGCTTGAGGGTCTTCAGGCTAATGTTCAGAGGCTGAAGACTTA
JMFF041H11-           CCGCCGTAGGAACAGTTCGCTTGAGGGTCTTCAGGCTAATGTTCAGAGGCTGAAGACTTA
rJMFF002H14+          CCGCCGTAGGAACAGTTCGCTTGAGGGTCTTCAGGCTAATGTTCAGAGGCTGAAGACTTA
rJMSF027C12+          CCGCCGTAGGAACAGTTCGCTTGAGGGTCTTCAGGCTAATGTTCAGAGGCTGAAGACTTA
rJMFF020J09+          CCGCCGTAGGAACAGTTCGCTTGAGGGTCTTCAGGCTAATGTTCAGAGGCTGAAGACTTA
rJMFF041H11+          CCGCCGTAGGAACAGTTCGCTTGAGGGTCTTCAGGCTAATGTTCAGAGGCTGAAGACTTA
rJMFF035D10+          CCGCCGTAGGAACAGTTCGCTTGAGGGTCTTCAGGNTAATGTTCAGAGGCTGAAGACTTA
                      ____________________________________________________________
consensus             CCGCCGTAGGAACAGTTCGCTTGAGGGTCTTCAGGCTAATGTTCAGAGGCTGAAGACTTA
 
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JMFF020J09-           CAAGGCCAAATTGGTTGTCTTCCCAAGACGTGCTCGCAAATTTAAGGCTGGTGATTCTAC
JMFF002H14-           CAAGGCCAAATTGGTTGTCTTCCCAAGACGTGCTCGCAAATTTAAGGCTGGTGATTCTAC
JMFF041H11-           CAAGGCCAAATTGGTTGTCTTCCCAAGACGTGCTCGCAAATTTAAGGCTGGTGATTCTAC
rJMFF002H14+          CAAGGCCAAATTGGTTGTCTTCCCAAGACGTGCTCGCAAATTTAAGGCTGGTGATTCTAC
rJMSF027C12+          CAAGGCCAAATTGGTTGTCTTCCCAAGACGTGCTCGCAAATTTAAGGCTGGTGATTCTAC
rJMFF020J09+          CAAGGCCAAATTGGTTGTCTTCCCAAGACGTGCTCGCAAATTTAAGGCTGGTGATTCTAC
rJMFF041H11+          CAAGGCCAAATTGGTTGTCTTCCCAAGACGTGCTCGCAAATTTAAGGCTGGTGATTCTAC
rJMFF035D10+          CAAGGCCAAATTGGTTGTCTTCCCAAGACGTGCTCGCAAATTTAAGGCTGGTGATTNTAC
                      ____________________________________________________________
consensus             CAAGGCCAAATTGGTTGTCTTCCCAAGACGTGCTCGCAAATTTAAGGCTGGTGATTCTAC
 
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JMFF020J09-           TCCCGAGGAATTGGCCACTGCAACCCAAGTCAATGGTCCTTACCTCCCTATTCTACGTGA
JMFF002H14-           TCCCGAGGAATTGGCCACTGCAACCCAAGTCAATGGTCCTTACCTCCCTATTCTACGTGA
rJMSF023C20+                                       TCAATGGTCCTTACCTCCCTNTTNTACGTGA
JMFF041H11-           TCCCGAGGAATTGGCCACTGCAACCCAAGTCAATGGTCCTTACCTCCCTATTCTACGTGA
rJMFF002H14+          TCCCGAGGAATTGGCCACTGCAACCCAAGTCAATGGTCCTTACCTCCCTATTCTACGTGA
rJMSF027C12+          TCCCGAGGAATTGGCCACTGCAACCCAAGTCAATGGTCCTTACCTCCCTATTCTACGTGA
rJMFF020J09+          TCCCGAGGAATTGGCCACTGCAACCCAAGTCAATGGTCCTTACCTCCCTATTCTACGTGA
rJMFF041H11+          TCCCGAGGAATTGGCCACTGCAACCCAAGTCAATGGTCCTTACCTCCCTATTCTACGTGA
rJMFF035D10+          TCCCGAGGAATTGGCCACTGCAACCCAAGTCAATGGTCCTTACCTCCCTATTNTACGTGA
                      ____________________________________________________________
consensus             TCCCGAGGAATTGGCCACTGCAACCCAAGTCAATGGTCCTTACCTCCCTATTCTACGTGA
 
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JMFF020J09-           GA                                                          
JMFF002H14-           GAAGGCTTCAGTGG                                              
rJMSF023C20+          GAAGGCTTCAGTGGAGTTTGTTANGGTCNCAGANGACATGAAGTCNTTCAAGGCATATGA
JMFF041H11-           GAAGGCTTCAGTGGAGTTTGTTAAGGTCACAGACGACATGAAGTCATTCAAGGCATATGA
rJMFF002H14+          GAAGGCTTCAGTGGAGTTTGTTAAGGTCACAGACGACATGAAGTCATTCAAGGCATATGA
rJMSF027C12+          GAAGGCTTCAGTGGAGTTTGTTAAGGTCACAGACGACATGAAGTCATTCAAGGCATATGA
rJMFF020J09+          GAAGGCTTCAGTGGAGTTTGTTAAGGTCACAGACGACATGAAGTCATTCAAGGCATATGA
rJMFF041H11+          GAAGGCTTCAGTGGAGTTTGTTAAGGTCACAGACGACATGAAGTCATTCAAGGCATATGA
rJMFF035D10+          GAAGGCTTCAGTGGAGTTTGTTAAGGTCACAGACGACATGAAGTCATTCAAGGCATATGA
                      ____________________________________________________________
consensus             GAAGGCTTCAGTGGAGTTTGTTAAGGTCACAGACGACATGAAGTCATTCAAGGCATATGA
 
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rJMSF023C20+          CNAGNTGCGTCTTGAACGGACGAATGAGCGCCATNTCGGTGCCAGGGCAAAGAGGG    
JMFF041H11-           CAAGCTGCGTCTTGAACGGACGAATGAGCGCCATATCGGTGCCAGGGCAAAGAGGGCTGC
rJMFF002H14+          CAAGCTGCGTCTTGAACGGACGAATGAGCGCCATATCGGTGCCAGGGCAAATAGGGCTGC
rJMSF027C12+          CAAGCTGCGTCTTGAACGGACGAATGAGCGCCATATCGGTGCCAGGGCAAAGAGGGCTGC
rJMFF020J09+          CAAGCTGCGTCTTGAACGGACGAATGAGCGCCATATCGGTGCCAGGGCAAAGAGGGCTGC
rJMFF041H11+          CAAGCTGCGTCTTGAACGGACGAATGAGCGCCATATCGGTGCCAGGGCAAAGAGGGCTGC
rJMFF035D10+          CAAGCTGCGTCTTGAACGGACGAATGAGCGCCATATCGGTGCCAGGGCAAAGAGGGCTGC
                      ____________________________________________________________
consensus             CAAGCTGCGTCTTGAACGGACGAATGAGCGCCATATCGGTGCCAGGGCAAAGAGGGCTGC
 
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JMFF041H11-           TGAGGCTG                                                    
rJMFF002H14+          TGAGGCTGAGAAGGAGGACAAAAAATAGTGTCCAACCTCTTCACTGCGCAAGCTAAATGA
rJMSF027C12+          TGAGGCTGAGAAGGAGGACAAAAAATAGTGTCCAACCTCTTCACTGCGCAAGCTAAATGA
rJMFF020J09+          TGAGGCTGAGAAGGAGGACAAAAAATAGTGTCCAACCTCTTCACTGCGCAAGCTAAATGA
rJMFF041H11+          TGAGGCTGAGAAGGAGGACAAAAAATAGTGTCCAACCTCTTCACTGCGCAAGCTAAATGA
rJMFF035D10+          TGAGGCTGAGAAGGAGGACAAAAAATAGTGTCCAACCTCTTCACTGCGCAAGCTAAATGA
                      ____________________________________________________________
consensus             TGAGGCTGAGAAGGAGGACAAAAAATAGTGTCCAACCTCTTCACTGCGCAAGCTAAATGA
 
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rJMFF002H14+          GTCACTGCTCTTTTTCTTCTGAATCATCAATATTAGCAATTATACTATTGATTGTGTATG
rJMSF027C12+          GTCACTGCTCTTTTTCTTCTGAATCATCAATATTAGCAATTATACTATTGATTGTGTATG
rJMFF020J09+          GTCACTGCTCTTTTTCTTCTGAATCATCAATATTAGCAATTATACTATTGATTGTGTATG
rJMFF041H11+          GTCACTGCTCTTTTTCTTCTGAATCATCAATATTAGCAATTATACTATTGATTGTGTATG
rJMFF035D10+          GTCACTGCTCTTTTTCTTCTGAATCATCAATATTAGCAATTATACTATTGATTGTGTATG
                      ____________________________________________________________
consensus             GTCACTGCTCTTTTTCTTCTGAATCATCAATATTAGCAATTATACTATTGATTGTGTATG
 
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rJMFF002H14+          AACTTCAAGATTTTCAACATTTATGGATTTGGATACC                       
rJMSF027C12+          AACTTCAAGATTTTCAACATTTATGGATTTGGATACCTGTCTATGAAATG          
rJMFF020J09+          AACTTCAAGATTTTCAACATTTATGGATTTGGATACCTGTCTATGAAATGTGTTTTCAT 
rJMFF041H11+          AACTTCAAGATTTTCAACATTTATGGATTTGGATACCTGTCTATGAAATGTGTTTTCAT 
rJMFF035D10+          AACTTCAAGATTTTCAACATTTATGGATTTGGATACCTGTCTATGAAATGTGTTTTCATA
                      ____________________________________________________________
consensus             AACTTCAAGATTTTCAACATTTATGGATTTGGATACCTGTCTATGAAATGTGTTTTCATA
 
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rJMFF035D10+          ATATTCATGGGTGTTNTACTCTCTTGATCCATGTCAGTCTCAGTTAGCAATTTTAGTCAG
                      ____________________________________________________________
consensus             ATATTCATGGGTGTTNTACTCTCTTGATCCATGTCAGTCTCAGTTAGCAATTTTAGTCAG
 
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rJMFF035D10+          TATATATGTTTTTTTTTGTTTGATTCTTTAACACTCTTGTTGGATCTTCTGACCTCAATA
                      ____________________________________________________________
consensus             TATATATGTTTTTTTTTGTTTGATTCTTTAACACTCTTGTTGGATCTTCTGACCTCAATA