| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF024A10 | Sequence | 491 | 002633 (8) | emb|CDP06091.1| | 2e-35 | unnamed protein product [Coffea canephora] | 811 | 002633 (8) | ref|XP_011098112.1| | 1e-45 | PREDICTED: coiled-coil domain-containing protein 94 isoform X1 [Sesamum indicum |
| JMFF034H12 | Sequence | 507 | 002633 (8) | emb|CDP06091.1| | 1e-34 | unnamed protein product [Coffea canephora] | 716 | 002633 (8) | ref|XP_011098112.1| | 3e-08 | PREDICTED: coiled-coil domain-containing protein 94 isoform X1 [Sesamum indicum |
| JMFF039M20 | Sequence | 494 | 002633 (8) | emb|CDP06091.1| | 1e-35 | unnamed protein product [Coffea canephora] | 809 | 002633 (8) | ref|XP_011098112.1| | 8e-33 | PREDICTED: coiled-coil domain-containing protein 94 isoform X1 [Sesamum indicum |
| JMSF035F18 | Sequence | 650 | 002633 (8) | emb|CDP06091.1| | 7e-94 | unnamed protein product [Coffea canephora] | 716 | 002633 (8) | ref|XP_011098112.1| | 4e-09 | PREDICTED: coiled-coil domain-containing protein 94 isoform X1 [Sesamum indicum |
This contig is upended
. : . : . : . : . : . :
JMFF034H12- AATACAACCAATAACGGTTGTCGTACTAA
JMFF024A10- GTCGTACTAA
JMFF039M20- GTCGTACTAA
____________________________________________________________
consensus AATACAACCAATAACGGTTGTCGTACTAA
. : . : . : . : . : . :
JMFF034H12- GCCCCTCAACCCTTTCCAGGCTTCCCTAATTCCTCTCGGCCTCATTCTCTTCTTCTCCAA
JMFF024A10- GCCCCTCAACCCTTTCCAGGCTTCCCTAATTCCTCTCGGCCTCATTCTCTTCTTCTCCAA
JMFF039M20- GCCCCTCAACCCTTTCCAGGCTTCCCTAATTCCTCTCGGCCTCATTCTCTTCTTCTCCAA
____________________________________________________________
consensus GCCCCTCAACCCTTTCCAGGCTTCCCTAATTCCTCTCGGCCTCATTCTCTTCTTCTCCAA
. : . : . : . : . : . :
JMFF034H12- ATTTCCAATCTTCACGAGACCACAGCCGACTCCAATCTCCGACGCCCTCCATCCAAATCT
JMFF024A10- ATTTCCAATCTTCACGAGACCACAGCCGACTCCAATCTCCGACGCCCTCCATCCAAATCT
JMFF039M20- ATTTCCAATCTTCACGAGACCACAGCCGACTCCAATCTCCGACGCCCTCCATCCAAATCT
____________________________________________________________
consensus ATTTCCAATCTTCACGAGACCACAGCCGACTCCAATCTCCGACGCCCTCCATCCAAATCT
. : . : . : . : . : . :
JMFF034H12- TCCTCTCACGCCCTCCGGCTGTCCGGCCGACGCCCTCGCTGCTCAAGGAGTCAAGGAGAC
JMFF024A10- TCCTCTCACGCCCTCCGGCTGTCCGGCCGACGCCCTCGCTGCTCAAGGAGTCAAGGAGAC
JMFF039M20- TCCTCTCACGCCCTCCGGCTGTCCGGCCGACGCCCTCGCTGCTCAAGGAGTCAAGGAGAC
____________________________________________________________
consensus TCCTCTCACGCCCTCCGGCTGTCCGGCCGACGCCCTCGCTGCTCAAGGAGTCAAGGAGAC
. : . : . : . : . : . :
JMFF034H12- AAGTAGGAACTTGCTCGATAAGGACTTTTCTGTTTTGTTTGGAAGTATTTTGAGCTGGTG
JMFF024A10- AAGTAGGAACTTGCTCGATAAGGACTTTTCTGTTTTGTTTGGAAGTATTTTGAGCTGGTG
JMFF039M20- AAGTAGGAACTTGCTCGATAAGGACTTTTCTGTTTTGTTTGGAAGTATTTTGAGCTGGTG
____________________________________________________________
consensus AAGTAGGAACTTGCTCGATAAGGACTTTTCTGTTTTGTTTGGAAGTATTTTGAGCTGGTG
. : . : . : . : . : . :
JMFF034H12- TTTACTAAATTCCGTTTGATTTGATCCGATTGAGAGGGAGGACTGATAAGCCACCATGGG
JMFF024A10- TTTACTAAATTCCGTTTGATTTGATCCGATTGAGAGGGAGGACTGATAAGCCACCATGGG
JMFF039M20- TTTACTAAATTCCGTTTGATTTGATCCGATTGAGAGGGAGGACTGATAAGCCACCATGGG
JMSF035F18- AGAGGGAGGACTGATAAGCCACCATGGG
____________________________________________________________
consensus TTTACTAAATTCCGTTTGATTTGATCCGATTGAGAGGGAGGACTGATAAGCCACCATGGG
. : . : . : . : . : . :
JMFF034H12- AGAGAGAAAGGTTTTGAACAAGTACTATCCGCCGGATTTCGATCCGGCGAAGATACCGCG
JMFF024A10- AGAGAGAAAGGTTTTGAACAAGTACTATCCGCCGGATTTCGATCCGGCGAAGATACCGCG
JMFF039M20- AGAGAGAAAGGTTTTGAACAAGTACTATCCGCCGGATTTCGATCCGGCGAAGATACCGCG
JMSF035F18- AGAGAGAAAGGTTTTGAACAAGTACTATCCGCCGGATTTCGATCCGGCGAAGATACCGCG
____________________________________________________________
consensus AGAGAGAAAGGTTTTGAACAAGTACTATCCGCCGGATTTCGATCCGGCGAAGATACCGCG
. : . : . : . : . : . :
JMFF034H12- CCGGAGGCAGCCGAAGAACCAGCAAATGAAGGTTCGAATGATGCTTCCAATGAGCGTTAG
JMFF024A10- CCGGAGGCAGCCGAAGAACCAGCAAATGAAGGTTCGAATGATGCTTCCAATGAGCGTTAG
JMFF039M20- CCGGAGGCAGCCGAAGAACCAGCAAATGAAGGTTCGAATGATGCTTCCAATGAGCGTTAG
JMSF035F18- CCGGAGGCAGCCGAAGAACCAGCAAATGAAGGTTCGAATGATGCTTCCAATGAGCGTTAG
____________________________________________________________
consensus CCGGAGGCAGCCGAAGAACCAGCAAATGAAGGTTCGAATGATGCTTCCAATGAGCGTTAG
. : . : . : . : . : . :
JMFF034H12- ATGCAATACCTGCGGGAACTATATCTACAAGGGCACCAAATTCAACTCCCGCAAAGAA
JMFF024A10- ATGCAATACCTGCGGGAACTATATCTACAAGGGCACCAAATTCAACTCCCGCAAAGAA
JMFF039M20- ATGCAATACCTGCGGGAACTATATCTACAAGGGCACCAAATTCAACTCCCGCAAAGAA
JMSF035F18- ATGCAATACCTGCGGGAACTATATCTACAAGGGCACCAAATTCAACTCCCGCAAAGAAGA
____________________________________________________________
consensus ATGCAATACCTGCGGGAACTATATCTACAAGGGCACCAAATTCAACTCCCGCAAAGAAGA
. : . : . : . : . : . :
JMSF035F18- CGCCGTAGGCGAGAACTATTTGGGTATTCAAATATTCAGATTCTACTTCAAGTGCACAAA
____________________________________________________________
consensus CGCCGTAGGCGAGAACTATTTGGGTATTCAAATATTCAGATTCTACTTCAAGTGCACAAA
. : . : . : . : . : . :
JMSF035F18- GTGCTCTGCAGAGATCACGTACAAAACGGATCCAAAAAATTCTGATTATATTGTTGAGTC
____________________________________________________________
consensus GTGCTCTGCAGAGATCACGTACAAAACGGATCCAAAAAATTCTGATTATATTGTTGAGTC
. : . : . : . : . : . :
JMSF035F18- GGGTGCAACAAGGAATTTTGAACCTTGGCGTGAACAAGATGAGGAAATTGAGAAACTGAA
____________________________________________________________
consensus GGGTGCAACAAGGAATTTTGAACCTTGGCGTGAACAAGATGAGGAAATTGAGAAACTGAA
. : . : . : . : . : . :
JMSF035F18- ACAGAAAAGAGATGCTGAAGAAATGGGTGATGCTATGAGGTCATTGGAAAATAGGACGTT
rJMFF024A10+ AGAGATGCTGAAGAAATGGGTGATGCTATGAAGTCATTGGAAAATAGGACGTN
rJMFF039M20+ AGAGATGCTGAAGAAATGGGTGATGCTATGAAGTCATTGGAAAATAGGACGTG
____________________________________________________________
consensus ACAGAAAAGAGATGCTGAAGAAATGGGTGATGCTATGAAGTCATTGGAAAATAGGACGTT
. : . : . : . : . : . :
JMSF035F18- GGAT
rJMFF024A10+ GGATTCAAAAAGAGAAATGGATATTCTTGCTGCTTTGGATGAAATGAAAT-CCATGAAGT
rJMFF039M20+ GGATTCAAAAAGAGAAATGGATATTCTTGCTGCTTTGGATGAAATGAAATCCCATGAAGT
____________________________________________________________
consensus GGATTCAAAAAGAGAAATGGATATTCTTGCTGCTTTGGATGAAATGAAATCCCATGAAGT
. : . : . : . : . : . :
rJMFF024A10+ CAAGACAAGCAACCGTGAGTGTGGAAGCAATGCTTGAGGCTCTTACACACTCTGCTGAGG
rJMFF039M20+ CAAGACAAGCAACCGTGAGTGTGGAAGCAATGCTTGAGGCTCTTACACACTCTGCTGAGG
____________________________________________________________
consensus CAAGACAAGCAACCGTGAGTGTGGAAGCAATGCTTGAGGCTCTTACACACTCTGCTGAGG
. : . : . : . : . : . :
rJMFF024A10+ AAAAGGAAAGGAAAATGCTGGAAGAAGAGGAAGCTCTTATTAAATCTTTATTCAAAGGAG
rJMFF039M20+ AAAAGGAAAGGAAAATGCTGGAAGAAGAGGAAGCTCTTATTAAATCTTTATTCAAAGGAG
rJMSF035F18+ AAGGAG
____________________________________________________________
consensus AAAAGGAAAGGAAAATGCTGGAAGAAGAGGAAGCTCTTATTAAATCTTTATTCAAAGGAG
. : . : . : . : . : . :
rJMFF024A10+ AGCGAGAGAAGTTTGTAAAAAGAATCCGTGATGATGAAATTGAAGATGACGATGATGATG
rJMFF039M20+ AGCGAGAGAAGTTTGTAAAAAGAATCCGTGATGATGAAATTGAAGATGACGATGATGATG
rJMSF035F18+ AGCGAGAGAAGTTTGTAAAAAGAATCCGTGATGATGAAATTGAAGATGACGATGATGATG
rJMFF034H12+ AGAGAAGTTTGTAAAAAGAATCCGTGATGATGAAATTGAAGATGACGATGATGATG
____________________________________________________________
consensus AGCGAGAGAAGTTTGTAAAAAGAATCCGTGATGATGAAATTGAAGATGACGATGATGATG
. : . : . : . : . : . :
rJMFF024A10+ AAGAAGATTTGGATATACCACAAAAGAGTGGAGAATCATCAACCAATTCTGTTAAGAGGA
rJMFF039M20+ AAGAAGATTTGGATATACCACAAAAGAGTGGAGAATCATCAACCAATTCTGTTAAGAGGA
rJMSF035F18+ AAGAAGATTTGGATATACCACAAAAGAGTGGAGAATCATCAACCAATTCTGTTAAGAGGA
rJMFF034H12+ AAGAAGATTTGGATATACCACAAAAGAGTGGAGAATCATCAACCAATTCTGTTAAGAGGA
____________________________________________________________
consensus AAGAAGATTTGGATATACCACAAAAGAGTGGAGAATCATCAACCAATTCTGTTAAGAGGA
. : . : . : . : . : . :
rJMFF024A10+ GAAAGCTACCTGAGGAACTATGTAGTAACCCTACAGATGTCTTGACAAAATCCAATGCCA
rJMFF039M20+ GAAAGCTACCTGAGGAACTATGTAGTAACCCTACAGATGTCTTGACAAAATCCAATGCCA
rJMSF035F18+ GAAAGCTACCTGAGGAACTATGTAGTAACCCTACAGATGTCTTGACAAAATCCAATGCCA
rJMFF034H12+ GAAAGCTACCTGAGGAACTATGTAGTAACCCTACAGATGTCTTGACAAAATCCAATGCCA
____________________________________________________________
consensus GAAAGCTACCTGAGGAACTATGTAGTAACCCTACAGATGTCTTGACAAAATCCAATGCCA
. : . : . : . : . : . :
rJMFF024A10+ CTGACAACTCTAGTGACAAAGATAAAGCGGCGGGGAAGAGGGATTCTGGTAATGAAAAAT
rJMFF039M20+ CTGACAACTCTAGTGACAAAGATAAAGCGGCGGGGAAGAGGGATTCTGGTAATGAAAAAT
rJMSF035F18+ CTGACAACTCTAGTGACAAAGATAAAGCGGCGGGGAAGAGGGATTCTGGTAATGAAAAAT
rJMFF034H12+ CTGACAACTCTAGTGACAAAGATAAAGCGGCGGGGAAGAGGGATTCTGGTAATGAAAAAT
____________________________________________________________
consensus CTGACAACTCTAGTGACAAAGATAAAGCGGCGGGGAAGAGGGATTCTGGTAATGAAAAAT
. : . : . : . : . : . :
rJMFF024A10+ TCATTTTTATAGTCAAGAAGAAATCTTTGCCTTCTAGTAGCAAGGAGATTGTAGAGGAAG
rJMFF039M20+ TCATTTTTATAGTCAAGAAGAAATCTTTGCCTTCTAGTAGCAAGGAGATTGTAGAGGAAG
rJMSF035F18+ TCATTTTTATAGTCAAGAAGAAATCTTTGCCTTCTAGTAGCAAGGAGATTGTAGAGGAAG
rJMFF034H12+ TCATTTTTATAGTCAAGAAGAAATCTTTGCCTTCTAGTAGCAAGGAGATTGTAGAGGAAG
____________________________________________________________
consensus TCATTTTTATAGTCAAGAAGAAATCTTTGCCTTCTAGTAGCAAGGAGATTGTAGAGGAAG
. : . : . : . : . : . :
rJMFF024A10+ AAAAGCCCAAGCAGGAGGAAGAGGCAAGCCTGAAAAGCAATGGATTACTATCATTATGTC
rJMFF039M20+ AAAAGCCCAAGCAGGAGGAAGAGGCAAGCCTGAAAAGCAATGGATTACTATCATTATGTC
rJMSF035F18+ AAAAGCCCAAGCAGGAGGAAGAGGCAAGCCTGAAAAGCAATGGATTACTATCATTATGTC
rJMFF034H12+ AAAAGCCCAAGCAGGAGGAAGAGGCAAGCCTGAAAAGCAATGGATTACTATCATTATGTC
____________________________________________________________
consensus AAAAGCCCAAGCAGGAGGAAGAGGCAAGCCTGAAAAGCAATGGATTACTATCATTATGTC
. : . : . : . : . : . :
rJMFF024A10+ AACAATATGAGAGTGATGATGATGATGATGATTAGTTTGAGTATTTATGAATCTTAATTG
rJMFF039M20+ AACAATATGAGAGTGATGATGATGATGATGATTAGTTTGAGTATTTATGAATCTTAATTG
rJMSF035F18+ AACAATATGAGAGTGATGATGATGATGATGATTAGTTTGAGTATTTATGAATCTTAATTG
rJMFF034H12+ AACAATATGAGAGTGATGATGATGATGATGATTAGTTTGAGTATTTATGAATCTTAATTG
____________________________________________________________
consensus AACAATATGAGAGTGATGATGATGATGATGATTAGTTTGAGTATTTATGAATCTTAATTG
. : . : . : . : . : . :
rJMFF024A10+ TGTAAGATATGTGTACACTGTCGATTTGAGTTCAGCTCAGGCCCAGCTCTTGGAGGATTA
rJMFF039M20+ TGTAAGATATGTGTACACTGTCGATTTGAGTTCAGCTCAGGCCCAGCTCTTGGAGGATTA
rJMSF035F18+ TGTAAGATATGTGTACACTGTCGATTTGAGTTCAGCTCAGCCCCAGCTCTTGGAGGATTA
rJMFF034H12+ TGTAAGATATGTGTACACTGTCGATTTGAGTTCAGCTCAGGCCCAGCTCTTGGAGGATTA
____________________________________________________________
consensus TGTAAGATATGTGTACACTGTCGATTTGAGTTCAGCTCAGGCCCAGCTCTTGGAGGATTA
. : . : . : . : . : . :
rJMFF024A10+ GAAAGTGCTGCATATGGGAAAATATTTTACATTTTTTGTGTACTCAAACCAGCTCTTGGA
rJMFF039M20+ GAAAGTGCTGCATATGGGAAAATATTTTACATTTTTTGTGTACTCAAACCAGCTCTTGGA
rJMSF035F18+ GAAAGTGCTGCATATGGGAAAATATTTTACATTTTTTGTGTACTCAAACCAGCTCTTGGA
rJMFF034H12+ GAAAGTGCTGCATATGGGAAAATATTTTACATTTTTTGTGTACTCAAACCAGCTCTTGGA
____________________________________________________________
consensus GAAAGTGCTGCATATGGGAAAATATTTTACATTTTTTGTGTACTCAAACCAGCTCTTGGA
. : . : . : . : . : . :
rJMFF024A10+ GGATTAGAAAGTGGTGCATATGGGAAAATATTT
rJMFF039M20+ GGATTAGAAAGTGGTGCATATGGGAAAATATTT
rJMSF035F18+ GGATTAGAAAGTGGTGCATATGGGAAAATATTTTACATTTTTTTTGCAAAAATTTATCGG
rJMFF034H12+ GGATTAGAAAGTGGTGCATATGGGAAAATATTTTACATTTTTTTTGCAAAAATTTATCGG
____________________________________________________________
consensus GGATTAGAAAGTGGTGCATATGGGAAAATATTTTACATTTTTTTTGCAAAAATTTATCGG
. : . : . : . : . : . :
rJMSF035F18+ TGATAAGCATTGTTAATAGTTCCGTTTGGTAACATAGTTAGCTAACCTTGTTAAGTTGGG
rJMFF034H12+ TGATAAGCATTGTTAATAGTTCCGTTTGGTAACATAGTTAGCTAACCTTGTTAAGTTGGG
____________________________________________________________
consensus TGATAAGCATTGTTAATAGTTCCGTTTGGTAACATAGTTAGCTAACCTTGTTAAGTTGGG
. : . : . : . : . : . :
rJMSF035F18+ GTTGGCTGATTACTTCCATTTTGTAATAGAAATAGAACAACCAAGT
rJMFF034H12+ GTTGGCTGATTACTTCCATTTTGTAATAGAAATAGAACAACCAAGTTTATCTCATTACAT
____________________________________________________________
consensus GTTGGCTGATTACTTCCATTTTGTAATAGAAATAGAACAACCAAGTTTATCTCATTACAT