Contig 002630:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF033M20Sequence517005928 (4)ref|XP_011072089.1|1e-55PREDICTED: SPX domain-containing membrane protein At4g22990-like [Sesamum indic754002630 (3)ref|XP_009792570.1|6e-73PREDICTED: SPX domain-containing membrane protein At4g22990-like isoform X3 [Ni
JMFF038I12Sequence446006042 (3)744002630 (3)ref|XP_009792568.1|6e-83PREDICTED: SPX domain-containing membrane protein At4g22990-like isoform X1 [Ni
JMSF029B09Sequence698005928 (4)ref|XP_009593322.1|1e-95PREDICTED: SPX domain-containing membrane protein At4g22990 isoform X2 [Nicotia780002630 (3)ref|XP_009792570.1|2e-117PREDICTED: SPX domain-containing membrane protein At4g22990-like isoform X3 [Ni

Alignment

This contig is upended


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rJMSF029B09+                    AATATGATGAGAGTGAAGAAGCTCCAGAGGAGTCTCGATTACCAGTCAAC
                      ____________________________________________________________
consensus                       AATATGATGAGAGTGAAGAAGCTCCAGAGGAGTCTCGATTACCAGTCAAC
 
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rJMSF029B09+          TCTATTGCTGCAGCATACAGATTACTCACTCCCTCTGTGAAGGTTCAACTGTTGATTTAC
rJMFF038I12+            TATTGCTGCAGCATACAGATTACTCACTCCCTCTGTGAAGGTTCAACTGTTGATTTAC
                      ____________________________________________________________
consensus             TCTATTGCTGCAGCATACAGATTACTCACTCCCTCTGTGAAGGTTCAACTGTTGATTTAC
 
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rJMSF029B09+          TTTATGCTGAAATATGCTATGGAAATTTTACTCTCAGAATCTAGCGTTATTACAGAATAC
rJMFF038I12+          TTTATGCTGAAATATGCTATGGAAATTTTACTCTCAGAATCTAGCGTTATTACAGAATAC
                      ____________________________________________________________
consensus             TTTATGCTGAAATATGCTATGGAAATTTTACTCTCAGAATCTAGCGTTATTACAGAATAC
 
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rJMSF029B09+          TACTTCCAGTGGTCAACCGGCACTGTGGCAATTTTTCTAGCATGTCTTGGCTTAACAGTT
rJMFF038I12+          TACTTCCAGTGGTCAACCGGCACTGTGGCAATTTTTNTAGCATGTCTTGGCTTAACAGTT
rJMFF033M20+                                    GGCAATTTTTCTAGCATGTCTTGGCTTAACAGTT
                      ____________________________________________________________
consensus             TACTTCCAGTGGTCAACCGGCACTGTGGCAATTTTTCTAGCATGTCTTGGCTTAACAGTT
 
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rJMSF029B09+          CTTCCAGTAAACGTTGTCGTTGGAAGCTACATAAGTAACATGTTCCAGGATAGGCAAATT
rJMFF038I12+          CTTCCAGTAAACGTTGTCGTTGGAAGCTACATAAGTAACATGTTCCAGGATAGGCAAA-T
rJMFF033M20+          CTACCAGTAAACGTTGTCGTTGGAAGCTACATAAGTAACATGTTCCAGGATAGGCAAATT
                      ____________________________________________________________
consensus             CTTCCAGTAAACGTTGTCGTTGGAAGCTACATAAGTAACATGTTCCAGGATAGGCAAATT
 
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rJMSF029B09+          TTATTGGCATCCGAAATTATGGTTTTGCTGGGCATACTCCTAAGCTTTCAAGTAATCATC
rJMFF038I12+          TTATTGGCATCCGAAATTATGGTTTTGCTGGGCATACTCCTAAGCTTTCAAGTAATCATC
rJMFF033M20+          TTATTGGCATCCGAAATTATGGTTTTGCTGGGCATACTCCTAAGCTTTCAAGTAATCATC
                      ____________________________________________________________
consensus             TTATTGGCATCCGAAATTATGGTTTTGCTGGGCATACTCCTAAGCTTTCAAGTAATCATC
 
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rJMSF029B09+          CCGTATTCTGTGCCACAGTATGTCATCTCTGGGCTGATAATGTTTGTATCTGCAGAAGTT
rJMFF038I12+          CCGTATTCTGTGCCACAGTATGTCATCTCTGGGCTGATAATGTTTGTATCTGCAGAAGTT
rJMFF033M20+          CCGTATTCTGTGCCACAGTATGTCATCTCTGGGCTGATAATGTTTGTATCTGCAGAAGTT
                      ____________________________________________________________
consensus             CCGTATTCTGTGCCACAGTATGTCATCTCTGGGCTGATAATGTTTGTATCTGCAGAAGTT
 
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rJMSF029B09+          TTGGAAGGTGTCAATCTATCGCTCCTCTCCCGAGTCATGTCGTCGAGGCTTTCTCGTGGA
rJMFF038I12+          TTGGAAGGTGTCAATCTATCGCTCCTCTCCCGAGTCATGTCGTCGAGGCTTTCTCGTGGA
rJMFF033M20+          TTGGAAGGTGTCAATCTATCGCTCCTCTCCCGAGTCATGTCGTCGAGGCTTTCTCGTGGA
                      ____________________________________________________________
consensus             TTGGAAGGTGTCAATCTATCGCTCCTCTCCCGAGTCATGTCGTCGAGGCTTTCTCGTGGA
 
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rJMSF029B09+          ACCTACAATGGCGGCCTCTTGTCAACAGAAGCAGGCACAATTGCTCGAGTTATCGCAGAT
rJMFF038I12+          ACCTACAATGGCGGCCTCTTGTCAACAGAAGCAGGCACAATTGCTCGAGTTATCGCAGAT
rJMFF033M20+          ACCTACAATGGCGGCCTCTTGTCAACAGAAGCAGGCACAATTGCTCGAGTTATCGCAGAT
                      ____________________________________________________________
consensus             ACCTACAATGGCGGCCTCTTGTCAACAGAAGCAGGCACAATTGCTCGAGTTATCGCAGAT
 
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rJMSF029B09+          GGTACTATAACCCTGGCTGGTTATTTGGGGCAGAGCAGACTGTTGAATGCCACACTTCTT
rJMFF038I12+          GGTACTATAACCCTGGCTGGTTATTTGGGGCAGAGCAGACTGTTGAATGCCACACTTCTT
rJMFF033M20+          GGTACTATAACCCTGGCTGGTTATTTGGGGCAGAGCAGACTGTTGAATGCCACACTTCTT
                      ____________________________________________________________
consensus             GGTACTATAACCCTGGCTGGTTATTTGGGGCAGAGCAGACTGTTGAATGCCACACTTCTT
 
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rJMSF029B09+          CCTTCACTTCTCATTTGCATAGCATCCATTACTGCCACATGCTTTACCTACAATTCCTTG
rJMFF038I12+          CCTTCACTTCTCATTTGCATAGCATCCATTACTGCCACATGCTTTACCTACAATTCCTTG
rJMFF033M20+          CCTTCACTTCTCATTTGCATAGCATCCATTACTGCCACATGCTTTACCTACAATTCCTTG
                      ____________________________________________________________
consensus             CCTTCACTTCTCATTTGCATAGCATCCATTACTGCCACATGCTTTACCTACAATTCCTTG
 
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rJMSF029B09+          TACTGATTTTGGTGCTGCTATTTTTTGAAGAATGGTTTCAATTCCCAAAATCCCTATTTT
rJMFF038I12+          TACTGACTTTGGTGCTGCTATTTTTTGAAGAATGGTTTCAATTCCCAAAATCCCTATTTT
rJMFF033M20+          TACTGATTTTGGTGCTGCTATTTTTTGAAGAATGGTTTCAATTCCCAAAATCCCTATTTT
                      ____________________________________________________________
consensus             TACTGATTTTGGTGCTGCTATTTTTTGAAGAATGGTTTCAATTCCCAAAATCCCTATTTT
 
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rJMSF029B09+          TTAATTGTTGATTGTTTTTAGCATTTTATTTCCATTTCTTGTCAAATTAAACTNGTATAG
rJMFF038I12+          TTAATTGTTGATTGTTTTTAGCATTTTATTTCCATTTCTTGTCAAATTAAACTTGTATAG
rJMFF033M20+          TTAATTGTTGATTGTTTTTAGCATTTTATTTCCATTTCTTGTCAAATTAAACTTGTATAG
                      ____________________________________________________________
consensus             TTAATTGTTGATTGTTTTTAGCATTTTATTTCCATTTCTTGTCAAATTAAACTTGTATAG
 
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rJMSF029B09+          GTATTGCT                                                    
rJMFF038I12+          GTATTGCTTGTGCCAATTACAAAACAT                                 
rJMFF033M20+          GTATTGCTTGTGCCAATTACAAAACATTAATATACTGTCTCCATTCATGCTTCCCCTAGC
                      ____________________________________________________________
consensus             GTATTGCTTGTGCCAATTACAAAACATTAATATACTGTCTCCATTCATGCTTCCCCTAGC
 
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rJMFF033M20+          CCCAGTGTCTATTGCTCTTTAGACTTTATTATATTCATATAAAGGCAGAAAATGCAACTT
                      ____________________________________________________________
consensus             CCCAGTGTCTATTGCTCTTTAGACTTTATTATATTCATATAAAGGCAGAAAATGCAACTT
 
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rJMFF033M20+          GTGACAATGTTGTACCAAAATTTGTGTCATATGACAATATTGTACGGAGTACTAAATTTG
                      ____________________________________________________________
consensus             GTGACAATGTTGTACCAAAATTTGTGTCATATGACAATATTGTACGGAGTACTAAATTTG