Contig 002629:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF007E08Sequence494001721 (2)emb|CDP02314.1|1e-66unnamed protein product [Coffea canephora]766002629 (3)gb|EYU44193.1|3e-05hypothetical protein MIMGU_mgv1a003695mg [Erythranthe guttata]
JMFF033I18Sequence553001721 (2)emb|CDP02314.1|3e-66unnamed protein product [Coffea canephora]737002629 (3)gb|EYU44193.1|3e-05hypothetical protein MIMGU_mgv1a003695mg [Erythranthe guttata]
JMSF034P20Sequence674020042ref|XP_009769108.1|1e-63PREDICTED: protein RIK isoform X4 [Nicotiana sylvestris]721002629 (3)gb|EYU44193.1|2e-05hypothetical protein MIMGU_mgv1a003695mg [Erythranthe guttata]

Alignment

This contig is upended


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rJMSF034P20+                                                     CCCCATCAGTTGCAGGA
rJMFF007E08+                        ACCTGCTACAGGAAAGGGCACAGCTAATCCCCCATCAGTTGCAGGA
rJMFF033I18+                                                     CCCCATCAGTTGCAGGA
                      ____________________________________________________________
consensus                           ACCTGCTACAGGAAAGGGCACAGCTAATCCCCCATCAGTTGCAGGA
 
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rJMSF034P20+          CTTGCAGCCTCCAAAGCCTCGGGATCTAAATACAGATGCTGGTGCAAGAGATAACACAAC
rJMFF007E08+          CTTGCAGCCTCCAAAGCCTCGGGATNTAAATACAGATGCTGGTGCAAGAGATAACACAAC
rJMFF033I18+          CTTGCAGCNTCCAAAGCCTCGGGATCTAAATACAGATGCTGGTGCAAGAGATAACACAAC
                      ____________________________________________________________
consensus             CTTGCAGCCTCCAAAGCCTCGGGATCTAAATACAGATGCTGGTGCAAGAGATAACACAAC
 
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rJMSF034P20+          TGTTCCCGCAAAGTTGTGCCAGCCATCATCTAGTGCAATGCCGCCACCTCCTCCTCCTCC
rJMFF007E08+          TGTTCCCGCAAAGTTGTGCCAGCCATCATCTAGTGCAATGCCGCCACCTCCTCCTCCTCC
rJMFF033I18+          TGTTCCCGCAAAGTTGTGCCAGCCATCATCTAGTGCAATGCCGCCACCTCCTCCTCCTCC
                      ____________________________________________________________
consensus             TGTTCCCGCAAAGTTGTGCCAGCCATCATCTAGTGCAATGCCGCCACCTCCTCCTCCTCC
 
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rJMSF034P20+          CAAGGTGATGCCATTGGCACCACCTCCACCACCAAAATTTAATTCACCAACCCCTGAAGT
rJMFF007E08+          CAAGGTGATGCCATTGGCACCACCTCCACCACCAAAATTTAATTCACCAACCCCTGAAGT
rJMFF033I18+          CAAGGTGATGCCATTGGCACCACCTCCACCACCAAAATTTAATTCACCAACCCCTGAAGT
                      ____________________________________________________________
consensus             CAAGGTGATGCCATTGGCACCACCTCCACCACCAAAATTTAATTCACCAACCCCTGAAGT
 
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rJMSF034P20+          GCATGGGAAAAACAATACGCCCCCTAAACCGTCATCTGAAATCTTCCCTGATACCCTCGT
rJMFF007E08+          GCATGGGAAAAACAATACGCCCCCTAAACCGTCATCTGAAATCTTCCCTGATACCCTCGT
rJMFF033I18+          GCATGGGAAAAACAATACGCCCCCTAAACCGTCATCTGAAATCTTCCCTGATACCCTCGT
                      ____________________________________________________________
consensus             GCATGGGAAAAACAATACGCCCCCTAAACCGTCATCTGAAATCTTCCCTGATACCCTCGT
 
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rJMSF034P20+          CAAGCTAATGGAATATGGAGATGATGATGATGATGATGTTGATGACATTGAGCATGCAGC
rJMFF007E08+          CAAGCTAATGGAATATGGAGGTGATGATGATGATGATGTTGATGACATTGAGCATGCAGC
rJMFF033I18+          CAAGCTAATGGAATATGGAGGTGATGATGATGATGATGTTGATGACATTGAGCATGCAGC
                      ____________________________________________________________
consensus             CAAGCTAATGGAATATGGAGGTGATGATGATGATGATGTTGATGACATTGAGCATGCAGC
 
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rJMSF034P20+          TGCTGCAGAGCCATTGCAGAGCAAATCAAATGTACCAGCAGGTCCAAAACCATTCTGGGC
rJMFF007E08+          TGCTGCAGAGCCATTGCAGAGCAAATCAAATGTACCAGCAGGTCCAAAACCATTCTGGGC
rJMFF033I18+          TGCTGCAGAGCCATTGCAGAGCAAATCAAATGTACCAGCAGGTCCAAAACCATTCTGGGC
                      ____________________________________________________________
consensus             TGCTGCAGAGCCATTGCAGAGCAAATCAAATGTACCAGCAGGTCCAAAACCATTCTGGGC
 
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rJMSF034P20+          TGTTTAAAATCTGCAGATTAATCTTCTAGAACTTTCCATTTTCGTATTGAGGGTGAAATT
rJMFF007E08+          TGTTTAAAATCTGCAGATTAATCTTCTAGAACTTTCCATTTTCGTATTGAGGGTGAAATT
rJMFF033I18+          TGTTTAAAATCTGCAGATTAATCTTCTAGAACTTTCCATTTTCGTATTGAGGGTGAAATT
                      ____________________________________________________________
consensus             TGTTTAAAATCTGCAGATTAATCTTCTAGAACTTTCCATTTTCGTATTGAGGGTGAAATT
 
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rJMSF034P20+          TTTTTGCACACAAGTACCTAGATGGAGTTGCCGGATGGTTTGATGCTTGGTCTATAGCAT
rJMFF007E08+          TTTTTGCACACAAGTACCTAGATGGAGTTGCCGGATGGTTTGATGCTTGGTCTATAGCAT
rJMFF033I18+          TTTTTGCACACAAGTACCTAGATGGAGTTGCCGGATGGTTTGATGCTTGGTCTATAGCAT
                      ____________________________________________________________
consensus             TTTTTGCACACAAGTACCTAGATGGAGTTGCCGGATGGTTTGATGCTTGGTCTATAGCAT
 
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rJMSF034P20+          AGGGTGATGTTTAATGGTGATTGATTTGTGCCTATCTGATCAGAAATTTGAGGGTAGGGA
rJMFF007E08+          AGGGTGATGTTTAATGGTGATTGATTTGTGCCTATCTGATCAGAAATTTGAGGGTAGGGA
rJMFF033I18+          AGGGTGATGTTTAATGGTGATTGATTTGTGCCTATCTGATCAGAAATTTGAGGGTAGGGA
                      ____________________________________________________________
consensus             AGGGTGATGTTTAATGGTGATTGATTTGTGCCTATCTGATCAGAAATTTGAGGGTAGGGA
 
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rJMSF034P20+          ATTAGGGATGGAGTAGGGGTTGCATTCTAGTTCAAGCCCTTCTTTGTACTTTGTACCTTT
rJMFF007E08+          ATTAGGGATGGAGTAGGGGTTGCATTCTAGTTCAAGCCCTTCTTTGTACTTTGTACCTTT
rJMFF033I18+          ATTAGGGATGGAGTAGGGGTTGCATTCTAGTTCAAGCCCTTCTTTGTACTTTGTACCTTT
                      ____________________________________________________________
consensus             ATTAGGGATGGAGTAGGGGTTGCATTCTAGTTCAAGCCCTTCTTTGTACTTTGTACCTTT
 
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rJMSF034P20+          GTTGTGGATATTTGTTGCTTGAGAATTTTTAACTTGGCATATTATCTGCAGCATATATCA
rJMFF007E08+          GTTGTGGATATTTGTTGCTTGAGAATTTTTAACTTGGCATATTATCTGCAGCATATATCA
rJMFF033I18+          GTTGTGGATATTTGTTGCTTGAGAATTTTTAACTTGGCATATTATCTGCAGCATATATCA
                      ____________________________________________________________
consensus             GTTGTGGATATTTGTTGCTTGAGAATTTTTAACTTGGCATATTATCTGCAGCATATATCA
 
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rJMSF034P20+          ATCTGTAAAAAAC                                               
rJMFF007E08+          ATCTGTAAAAAACACTGTATATGGCATTCTATGTTTTGTTGATCATT             
rJMFF033I18+          ATCTGTAAAAAACACTGTATATGGCATTCTATGTTTTGTTGATCATTAAATGGCAAATCC
                      ____________________________________________________________
consensus             ATCTGTAAAAAACACTGTATATGGCATTCTATGTTTTGTTGATCATTAAATGGCAAATCC