Contig 002628:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF033H07+                                                                    GG
                      ____________________________________________________________
consensus                                                                       GG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF033H07+          ATACCTTGGGGCAAAGACACNTCACATTGAGTATCCAGTGAGAACGAACCAAATCCCCCG
                      ____________________________________________________________
consensus             ATACCTTGGGGCAAAGACACNTCACATTGAGTATCCAGTGAGAACGAACCAAATCCCCCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF033F19+            AAATTCCTGCTCAAAAATATCCATCTTGGCTATTAGTCCTTGGTGCTGGTACCCTACC
rJMFF033H07+          TGAAATTCCTGCTCAAAAATATCCATCTTGGCTATTAGTCCTTGGTGCTGGTACCCTACC
                      ____________________________________________________________
consensus             TGAAATTCCTGCTCAAAAATATCCATCTTGGCTATTAGTCCTTGGTGCTGGTACCCTACC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF033F19+          TTTCGGCACACTTTTCATTGAGCTATTCTTTATCATGTCGAGTCTGTGGATGGGGCGTGT
rJMFF033H07+          TTTCGGCACACTTTTCATTGAGCTATTCTTTATCATGTCGAGTCTGTGGATGGGGCGTGT
                      ____________________________________________________________
consensus             TTTCGGCACACTTTTCATTGAGCTATTCTTTATCATGTCGAGTCTGTGGATGGGGCGTGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF033F19+          ATACTATGTGTTTGGATTTCTGCTGATTGTTATGATCCTACTGGTGGTGGTGTGTGCTGA
rJMFF033H07+          ATACTATGTGTTTGGATTTCTGCTGATTGTTATGATCCTACTGGTGGTGGTGTGTGCTGA
                      ____________________________________________________________
consensus             ATACTATGTGTTTGGATTTCTGCTGATTGTTATGATCCTACTGGTGGTGGTGTGTGCTGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF033F19+          GGTGTCGCTTGTTTTGACATACATGCACCTTTGTGTGGAGGACTGGCAGTGGTGGTGGAA
rJMFF033H07+          GGTGTCGCTTGTTTTGACATACATGCACCTTTGTGTGGAGGACTGGCAGTGGTGGTGGAA
                      ____________________________________________________________
consensus             GGTGTCGCTTGTTTTGACATACATGCACCTTTGTGTGGAGGACTGGCAGTGGTGGTGGAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF033F19+          GTCCTTCTTTGCTTCTGGATCTGTTGCCATATACATTTTCCTATACTCTGTGAACTATCT
rJMFF033H07+          GTCCTTCTTTGCTTCTGGATCTGTTGCCATATACATTTTCCTATACTCTGTGAACTATCT
                      ____________________________________________________________
consensus             GTCCTTCTTTGCTTCTGGATCTGTTGCCATATACATTTTCCTATACTCTGTGAACTATCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF033F19+          GGTGTTTGACCTGAAGAGCTTGAGCGGACCTGTTTCTGCTACCCTTTACTTAGGGTATTC
rJMFF033H07+          GGTGTTTGACCTGAAGAGCTTGAGCGGACCTGTTTCTGCTACCCTTTACTTAGGGTATTC
                      ____________________________________________________________
consensus             GGTGTTTGACCTGAAGAGCTTGAGCGGACCTGTTTCTGCTACCCTTTACTTAGGGTATTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF033F19+          TCTTTTCATGGTTCTGGCAATCATGCTTGCAACCGGTACAGTTGGCTTCGTATCCTCCTT
rJMFF033H07+          TCTTTTCATGGTTCTGGCAATCATGCTTGCAACCGGTACAGTTGGCTTCGTATCCTCCTT
                      ____________________________________________________________
consensus             TCTTTTCATGGTTCTGGCAATCATGCTTGCAACCGGTACAGTTGGCTTCGTATCCTCCTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF033F19+          CTGGTTTGTGCATTACTTGTTCTCTTCTGTGAAACTGGATTGAAACACAACAACATTTCC
rJMFF033H07+          CTGGTTTGTGCATTACTTGTTCTCTTCTGTGAAACTGGATTGAAACACAACAACATTTCC
                      ____________________________________________________________
consensus             CTGGTTTGTGCATTACTTGTTCTCTTCTGTGAAACTGGATTGAAACACAACAACATTTCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF033F19+          AGGCTCTCTCTCTCTAAAGTCTAAAGCTAGGAGGAATACGGGACAGAATATCATTGAGAG
rJMFF033H07+          AGGCTCTCTCTCTCTAAAGTCTAAAGCTAGGAGGAATACGGGACAGAATATCATTGAGAG
                      ____________________________________________________________
consensus             AGGCTCTCTCTCTCTAAAGTCTAAAGCTAGGAGGAATACGGGACAGAATATCATTGAGAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF033F19+          TATACTATATTATATTTCTTGTATTATTATTATTATTATTCTTGTTTCATAGGGAGTAAG
rJMFF033H07+          TATACTATATTATATTTCTTGTATTATTATTATTATTATTCTTGTTTCATAGGGAGTAAG
                      ____________________________________________________________
consensus             TATACTATATTATATTTCTTGTATTATTATTATTATTATTCTTGTTTCATAGGGAGTAAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF033F19+          AAGATGTGAAGATGAACAATAAACATCACCCACCTGTTCTTTGTTAAATTATTATTTGTT
rJMFF033H07+          AAGATGTGAAGATGAACAATAAACATCACCCACCTGTTCTTTGTTAAATTATTATTTGTT
                      ____________________________________________________________
consensus             AAGATGTGAAGATGAACAATAAACATCACCCACCTGTTCTTTGTTAAATTATTATTTGTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF033F19+          TCTTAGATGCAAGTAGGAGGATATTACTTAAACTGCTTTCTTTTATAGAGGAAAAAAAA 
rJMFF033H07+          TCTTAGATGCAAGTAGGAGGATATTACTTAAACTGCTTTCTTTTATAGAGGAAAAAAAAA
                      ____________________________________________________________
consensus             TCTTAGATGCAAGTAGGAGGATATTACTTAAACTGCTTTCTTTTATAGAGGAAAAAAAAA