Contig 002616:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF031D24Sequence561002616 (4)ref|XP_009622165.1|112PREDICTED: uncharacterized protein LOC104113643 [Nicotiana tomentosiformis]720002616 (4)ref|XP_009622165.1|112PREDICTED: uncharacterized protein LOC104113643 [Nicotiana tomentosiformis]
JMFF038G03Sequence462002616 (4)ref|XP_009622165.1|94.4PREDICTED: uncharacterized protein LOC104113643 [Nicotiana tomentosiformis]421002616 (4)ref|XP_009622165.1|94.4PREDICTED: uncharacterized protein LOC104113643 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMFF038G03+                                 CAAACCAAATTGTACAAACTTCATTCATATCACGTAGA
rJMFF038G03-                                                              CACGTAGA
rJMFF031D24-          AATTTAATGTAACCATTGAATACAAACCAAATTGTACAAACTTCATTCATATCACGTAGA
                      ____________________________________________________________
consensus             AATTTAATGTAACCATTGAATACAAACCAAATTGTACAAACTTCATTCATATCACGTAGA
 
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JMFF038G03+           AAATTTGTGACATTCATTTATGAATTCCTTGAATCAAATTATAATTNGTGACAATAATAA
rJMFF038G03-          AAATTTGTGACATTCATTTATGAATTCCTTGAATCAAATTATAATTCGTGACAATAATAA
rJMFF031D24-          AAATTTGTGACATTCATTTATGAATTCCTTGAATCAAATTATAATTCGTGACAATAATAA
                      ____________________________________________________________
consensus             AAATTTGTGACATTCATTTATGAATTCCTTGAATCAAATTATAATTCGTGACAATAATAA
 
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JMFF031D24+                                                  CCTCGTCACAGTCCCGCTTTC
JMFF038G03+           TTACACCCAAAAATATCCGAGCCGAAATGACAAATCTGCCCTCGTCACAGTCCCGCTTTC
rJMFF038G03-          TTACACCCAAAAATATCCGAGCCGAAATGACAAATCTGCCCTCGTCACAGTCCCGCTTTC
rJMFF031D24-          TTACACCCAAAAATATCCGAGCCGAAATGACAAATCTGCCCTCGTCACAGTCCCGCTTTC
                      ____________________________________________________________
consensus             TTACACCCAAAAATATCCGAGCCGAAATGACAAATCTGCCCTCGTCACAGTCCCGCTTTC
 
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JMFF031D24+           ATTTGTTGACCGACAGCGGGGACAGCATACCTAGACGAGAAATTACGGAAAAGCCCATTG
JMFF038G03+           ATTTGTTGACCGACAGCGGGGACAGCATACCTAGACGAGAAATTACGGAAAAGCCCATTG
rJMFF038G03-          ATTTGTTGACCGACAGCGGGGACAGCATACCTAGACGAGAAATTACGGAAAAGCCCATTG
rJMFF031D24-          ATTTGTTGACCGACAGCGGGGACAGCATACCTAGACGAGAAATTACGGAAAAGCCCATTG
                      ____________________________________________________________
consensus             ATTTGTTGACCGACAGCGGGGACAGCATACCTAGACGAGAAATTACGGAAAAGCCCATTG
 
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JMFF031D24+           CCTTGCTCCTCCTCCGCCGCCGCCGCCGCCGCCGTGCCGTTATCGAAGTTCAGCGCATAG
JMFF038G03+           CCTTGCTCCTCCTCCGCCGCCGCCGCCGCCGCCGTGCCGTTATCGAAGTTCAGCGCATAG
rJMFF038G03-          CCTTGCTCCTCCTCCGCCGCCGCCGCCGCCGCCGTGCCGTTATCGAAGTTCAGCGCATAG
rJMFF031D24-          CCTTGCTCCTCCTCCGCCGCCGCCGCCGCCGCCGTGCCGTTATCGAAGTTCAGCGCATAG
                      ____________________________________________________________
consensus             CCTTGCTCCTCCTCCGCCGCCGCCGCCGCCGCCGTGCCGTTATCGAAGTTCAGCGCATAG
 
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JMFF031D24+           CTCTGCGCGTCGTAAATAAACTGAGCCTTATAACCGCCCTTCAACTTAGGGTTGCAATAT
JMFF038G03+           CTCTGCGCGTCGTAAATAAACTGAGCCTTATAACCGCCCTTCAACTTAGGGTTGCAATAT
rJMFF038G03-          CTCTGCGCGTCGTAAATAAACTGAGCCTTATAACCGCCCTTCAACTTAGGGTTGCAATAT
rJMFF031D24-          CTCTGCGCGTCGTAAATAAACTGAGCCTTATAACCGCCCTTCAACTTAGGGTTGCAATAT
                      ____________________________________________________________
consensus             CTCTGCGCGTCGTAAATAAACTGAGCCTTATAACCGCCCTTCAACTTAGGGTTGCAATAT
 
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JMFF031D24+           CTCCCCATCTTCCTCAACAAATTCTTCCACCTCGGCCCCGCCACCACCTCCGACAACTCC
JMFF038G03+           CTCCCCATCTTCCTCAACAAATTCTTCCACCTCGGCCCCGCCACCACCTCCGACAACTCC
rJMFF038G03-          CTCCCCATCTTCCTCAACAAATTCTTCCACCTCGGCCCCGCCACCACCTCCGACAACTCC
rJMFF031D24-          CTCCCCATCTTCCTCAACAAATTCTTCCACCTCGGCCCCGCCACCACCTCCGACAACTCC
                      ____________________________________________________________
consensus             CTCCCCATCTTCCTCAACAAATTCTTCCACCTCGGCCCCGCCACCACCTCCGACAACTCC
 
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JMFF031D24+           CTCACCTTCTTCGCCTTTCCCCGCCACCACACAGCGGCACTCTCGCCGCCGATCAATGCT
JMFF038G03+           CTCACCTTCTTCGCCTTTCCCCGCCACCACACAGCGGCACTCTCGCCGCCGAT       
rJMFF038G03-          CTCACCTTCTTCGCCTTTCCCCGCCACCACACAGCGGCACTCTCGCCGCCGAT       
rJMFF031D24-          CTCACCTTCTTCGCCTTTCCCCGCCACCACACAGCGGCACTCTCGCCGCCGATCAATGCT
                      ____________________________________________________________
consensus             CTCACCTTCTTCGCCTTTCCCCGCCACCACACAGCGGCACTCTCGCCGCCGATCAATGCT
 
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JMFF031D24+           CTGGTGTTTCCCTCGCCGGAGCGGAAAGAGAGCAGCCTGAAACAGCCGCACCCGGTCGGA
rJMFF031D24-          CTGGTGTTTCCCTCGCCGGAGCGGAAAGAGAGCAGCCTGAAACAGCCGCACCCGGTCGGA
                      ____________________________________________________________
consensus             CTGGTGTTTCCCTCGCCGGAGCGGAAAGAGAGCAGCCTGAAACAGCCGCACCCGGTCGGA
 
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JMFF031D24+           GATCCCGCCTCTTCTTCGTCTACTATCGGTGAGTTAGCGATCATGAACGCTTGGCTTTCT
rJMFF031D24-          GATCCCGCCTCTTCTTCGTCTACTATCGGTGAGTTAGCGATCATGAACGCTTGGCTTTCT
                      ____________________________________________________________
consensus             GATCCCGCCTCTTCTTCGTCTACTATCGGTGAGTTAGCGATCATGAACGCTTGGCTTTCT
 
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JMFF031D24+           TGATTACCAGACATATTCTACCCTGCTTGTGTATATACAAAATATAAATACAAATACAAC
rJMFF031D24-          TGATTACCAGACATATTCTACCCTGCTTGTGTATATACAAAATATAAATACAAATACAAC
                      ____________________________________________________________
consensus             TGATTACCAGACATATTCTACCCTGCTTGTGTATATACAAAATATAAATACAAATACAAC
 
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JMFF031D24+           TGTGAATGTATAGATTTTCGCCGGGGGTGGGTGGGGTGATGAATAGGACGATGAAATCTT
rJMFF031D24-          TGTGAATGTATAGATTTTCGCCGGGGGTGGGTGGGGTGATGAATAGGACGATGAAATCTT
                      ____________________________________________________________
consensus             TGTGAATGTATAGATTTTCGCCGGGGGTGGGTGGGGTGATGAATAGGACGATGAAATCTT