Contig 002615:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF001K01Sequence572003204 (8)ref|XP_006352706.1|3e-47PREDICTED: probable pectate lyase 10-like [Solanum tuberosum]699002615 (6)gb|KJB37783.1|3e-27hypothetical protein B456_006G219800 [Gossypium raimondii]
JMFF004F11Sequence513003204 (8)ref|XP_006352706.1|2e-34PREDICTED: probable pectate lyase 10-like [Solanum tuberosum]726002615 (6)gb|KJB37783.1|2e-132hypothetical protein B456_006G219800 [Gossypium raimondii]
JMFF020K06Sequence539003204 (8)ref|XP_006352706.1|2e-40PREDICTED: probable pectate lyase 10-like [Solanum tuberosum]746002615 (6)ref|XP_011091390.1|3e-138PREDICTED: probable pectate lyase 8 [Sesamum indicum]
JMFF029H17Sequence539003204 (8)ref|XP_006352706.1|2e-40PREDICTED: probable pectate lyase 10-like [Solanum tuberosum]713002615 (6)gb|KJB37783.1|2e-117hypothetical protein B456_006G219800 [Gossypium raimondii]
JMFF031A02Sequence550003204 (8)ref|XP_006352706.1|3e-34PREDICTED: probable pectate lyase 10-like [Solanum tuberosum]665002615 (6)gb|KJB37783.1|1e-17hypothetical protein B456_006G219800 [Gossypium raimondii]
JMFF042M17Sequence649003204 (8)ref|XP_006352706.1|4e-64PREDICTED: probable pectate lyase 10-like [Solanum tuberosum]610002615 (6)gb|KJB37783.1|2e-100hypothetical protein B456_006G219800 [Gossypium raimondii]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF020K06+                                                          TCACCAATATTA
                      ____________________________________________________________
consensus                                                             TCACCAATATTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF020K06+          TAATCCATGGCCTTCATATTCATGACTGCAAGCCTACCGGCAATGCCATGGTTCGCAGCT
rJMFF029H17+                                                GGCAATGCCATGGTTCGCAGCT
rJMFF004F11+                   GCCTTCATATTCATGACTGCAAGCCTACCGGCAATGCCATGGTTNGCAGCT
                      ____________________________________________________________
consensus             TAATCCATGGCCTTCATATTCATGACTGCAAGCCTACCGGCAATGCCATGGTTCGCAGCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF020K06+          CCACTACTCATTATGG-TTGGAGGACCATGGCTGATGGTGATGGGATTTCTATTTTTGGG
rJMFF029H17+          CCACTACTCATTATGGNTTGGAGGACCATGGCTGATGGTGATGGGATTTCTATTTTTGGG
rJMFF004F11+          CCACTACTCATTATGG-TTGGAGGACCATGGCTGATGGTGATGGGATTTCTATTTTTGGG
                      ____________________________________________________________
consensus             CCACTACTCATTATGG-TTGGAGGACCATGGCTGATGGTGATGGGATTTCTATTTTTGGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF020K06+          TCTAGCCATATTTGGGTTGATCACAACTCTTTGTCTAACTGTGCTGATGGCCTCATTGAT
rJMFF029H17+          TCTAGCCATATTTGGGTTGATCACAACTCTTTGTCTAACTGTGCTGATGGCCTCATTGAT
rJMFF004F11+          TCTAGCCATATTTGGGTTGATCACAACTCTTTGTCTAACTGTGCTGATGGCCTCATTGAT
rJMFF042M17+                                 CAACTCTTTGTCTAACTGTGCTGATGGCCTCATTGAT
                      ____________________________________________________________
consensus             TCTAGCCATATTTGGGTTGATCACAACTCTTTGTCTAACTGTGCTGATGGCCTCATTGAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF020K06+          GCCATCATGGGATCAACCGCCATCACCATCTCCAACAATTACTTCACCCACCACAATGAG
rJMFF029H17+          GCCATCATGGGATCAACCGCCATCACCATCTCCAACAATTACTTCACCCACCACAATGAG
rJMFF004F11+          GCCATCATGGGATCAACCGCCATCACCATCTCCAACAATTACTTCACCCACCACAATGAG
rJMFF042M17+          GCCATCATGGGATCAACCGCCATCACCATCTCCAACAATTACTTCACCCACCACAATGAG
                      ____________________________________________________________
consensus             GCCATCATGGGATCAACCGCCATCACCATCTCCAACAATTACTTCACCCACCACAATGAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF020K06+          GTCATGCTACTGGGGCACAGTGATGCTTACGAAAGAGACAAGGTTATGCAGGTCACAGTA
rJMFF029H17+          GTCATGCTACTGGGGCACAGTGATGCTTACGAAAGAGACAAGGTTATGCAGGTCACAGTA
rJMFF004F11+          GTCATGCTACTGGGGCACAGTGATGCTTACGAAAGAGACAAGGTTATGCAGGTCACAGTA
rJMFF042M17+          GTCATGCTACTGGGGCACAGTGATGCTTACGAAAGAGACAAGGTTATGCAGGTCACAGTA
                      ____________________________________________________________
consensus             GTCATGCTACTGGGGCACAGTGATGCTTACGAAAGAGACAAGGTTATGCAGGTCACAGTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF020K06+          GCGTACAACCATTTTGGAGAGGGTTTGGTTCAGAGAATGCCAAGGTGTAGGTATGGATAC
rJMFF029H17+          GCGTACAACCATTTTGGAGAGGGTTTGGTTCAGAGAATGCCAAGGTGTAGGTATGGATAC
rJMFF004F11+          GCGTACAACCATTTTGGAGAGGGTTTGGTTCAGAGAATGCCAAGGTGTAGGTATGGATAC
rJMFF042M17+          GCGTACAACCATTTTGGAGAGGGTTTGGTTCAGAGAATGCCAAGGTGTAGGTATGGATAC
                      ____________________________________________________________
consensus             GCGTACAACCATTTTGGAGAGGGTTTGGTTCAGAGAATGCCAAGGTGTAGGTATGGATAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF020K06+          TTTCATGTGGTAAACAATGACTACACCCATTGGGAGATGTATGCCATTGGAGGCAGTGCT
rJMFF029H17+          TTTCATGTGGTAAACAATGACTACACCCATTGGGAGATGTATGCCATTGGAGGCAGTGCT
rJMFF004F11+          TTTCATGTGGTAAACAATGACTACACCCATTGGGAGATGTATGCCATTGGAGGCAGTGCT
rJMFF042M17+          TTTCATGTGGTAAACAATGACTACACCCATTGGGAGATGTATGCCATTGGAGGCAGTGCT
                      ____________________________________________________________
consensus             TTTCATGTGGTAAACAATGACTACACCCATTGGGAGATGTATGCCATTGGAGGCAGTGCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF020K06+          TCTCCCACAATCAACAGCCAAGGCAACAGATTTCTAGCCCCTACCAACCCTTTTGCTAAA
rJMFF029H17+          TCTCCCACAATCAACAGCCAAGGCAACAGATTTCTAGCCCCTACCAACCCTTTTGCTAAA
rJMFF004F11+          TCTCCCACAATCAACAGCCAAGGCAACAGATTTCTAGCCCCTACCAACCCTTTTGCTAAA
rJMFF042M17+          TCTCCCACAATCAACAGCCAAGGCAACAGATTTCTAGCCCCTACCAACCCTTTTGCTAAA
rJMFF001K01+                  AATCAACAGCCAAGGCAACAGATTTCTAGCCCNTACCAACCCTTTTGCTAAA
rJMFF031A02+                                                                 CTAAA
                      ____________________________________________________________
consensus             TCTCCCACAATCAACAGCCAAGGCAACAGATTTCTAGCCCCTACCAACCCTTTTGCTAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF020K06+          GAGGTGACTAAGAGGGTGGAAACATCTCACGGTGAATGGAAGAACTGGAATTGGAGATCA
rJMFF029H17+          GAGGTGACTAAGAGGGTGGAAACATCTCACGGTGAATGGAAGAACTGGAATTGGAGATCA
rJMFF004F11+          GAGGTGACTAAGAGGGTGGAAACATCTCACGGTGAATGGAAGAACTGGAATTGGAGATCA
rJMFF042M17+          GAGGTGACTAAGAGGGTGGAAACATCTCACGGTGAATGGAAGAACTGGAATTGGAGATCA
rJMFF001K01+          GAGGTGACTAAGAGGGTGGAAACATCTCACGGTGAATGGAAGAACTGGAATTGGAGATCA
rJMFF031A02+          GAGGTGACTAAGAGGGTGGAAACATCTCACGGTGAATGGAAGAACTGGAATTGGAGATCA
                      ____________________________________________________________
consensus             GAGGTGACTAAGAGGGTGGAAACATCTCACGGTGAATGGAAGAACTGGAATTGGAGATCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF020K06+          GAAGGCGACCTTATGCTCAACGGAGCTTATTTTACTCCATCTGGAGCCGGAGCCTCAGCT
rJMFF029H17+          GAAGGCGACCTTATGCTCAACGGAGCTTATTTTACTCCATCTGGAGCCGGAGCCTCAGCT
rJMFF004F11+          GAAGGCGACCTTATGCTCAACGGAGCTTATTTTACTCCATCTGGAGCCGGAGCCTCAGCT
rJMFF042M17+          GAAGGCGACCTTATGCTCAACGGAGCTTATTTTACTCCATCTGGAGCCGGAGCCTCAGCT
rJMFF001K01+          GAAGGCGACCTTATGCTCAACGGAGCTTATTTTACTCCATCTGGAGCCGGAGCCTCAGCT
rJMFF031A02+          GAAGGCGACCTTATGCTCAACGGAGCTTATTTTACTCCATCTGGAGCCGGAGCCTCAGCT
                      ____________________________________________________________
consensus             GAAGGCGACCTTATGCTCAACGGAGCTTATTTTACTCCATCTGGAGCCGGAGCCTCAGCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF020K06+          AAGTATGCAAAGGCGTCTAGCTTGGCAGCCAAGTCCTCTTCCCTAGTAGATATTCTTACA
rJMFF029H17+          AAGTATGCAAAGGCGTCTAGCTTGGCAGCCAAGTCCTCTTCCCTAGTAGATATTCTTACA
rJMFF004F11+          AAGTATGCAAAGGCGTCTAGCTTGGCAGCCAAGTCCTCTTCCCTAGTAGATATTCTTACA
rJMFF042M17+          AAGTATGCAAAGGCGTCTAGCTTGGCAGCCAAGTCCTCTTCCCTAGTAGATATTCTTACA
rJMFF001K01+          AAGTATGCAAAGGCGTCTAGCTTGGCAGCCAAGTCCTCTTCCCTAGTAGATATTCTTACA
rJMFF031A02+          AAGTATGCAAAGGCGTCTAGCTTGGCAGCCAAGTCCTCTTCCCTAGTAGATATTCTTACA
                      ____________________________________________________________
consensus             AAGTATGCAAAGGCGTCTAGCTTGGCAGCCAAGTCCTCTTCCCTAGTAGATATTCTTACA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF020K06+          TCTAATGCGGGTGCTCTATCCTGCCGTAAGGGTAGGCAATGTTAATTGTCAATACACAAA
rJMFF029H17+          TCTAATGCGGGTGCTCTATCCTGCCGTAAGGGTAGGCAATGTTAATTGTCAATACACAAA
rJMFF004F11+          TCTAATGCGGGTGCTCTATCCTGCCGTAAGGGTAGGCAATGTTAATTGTCAATACACAAA
rJMFF042M17+          TCTAATGCGGGTGCTCTATCCTGCCGTAAGGGTAGGCAATGTTAATTGTCAATACACAAA
rJMFF001K01+          TCTAATGCGGGTGCTCTATCCTGCCGTAAGGGTAGGCAATGTTAATTGTCAATACACAAA
rJMFF031A02+          TCTAATGCGGGTGCTCTATCCTGCCGTAAGGGTAGGCAATGTTAATTGTCAATACACAAA
                      ____________________________________________________________
consensus             TCTAATGCGGGTGCTCTATCCTGCCGTAAGGGTAGGCAATGTTAATTGTCAATACACAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF020K06+          AAACATCATCAAATC                                             
rJMFF029H17+          AAACATCATCAAATCT                                            
rJMFF004F11+          AAACATCATCAAATCT                                            
rJMFF042M17+          AAACATCATCAAATCTTGGACCAAAATTAACCC                           
rJMFF001K01+          AAACATCATCAAATCTTGGACCAAAATTAACCCAACCTCGAATTCTTTGTCTGTAAGCTA
rJMFF031A02+          AAACATCATCAAATCTTGGACCAAAATTAACCCAACCTCGAATTCTTTGTCTGTAAGCTA
                      ____________________________________________________________
consensus             AAACATCATCAAATCTTGGACCAAAATTAACCCAACCTCGAATTCTTTGTCTGTAAGCTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF001K01+          GCCTCCTATTCCCTTATTCTTAGGCCCTCGTTGCCTTGTAGCCTTGTCCATTTTTCAACC
rJMFF031A02+          GCCTCCTATTCCCTTATTCTTAGGCCCTCGTTGCCTTGTAGCCTTGTCCATTTTTCAACC
                      ____________________________________________________________
consensus             GCCTCCTATTCCCTTATTCTTAGGCCCTCGTTGCCTTGTAGCCTTGTCCATTTTTCAACC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF001K01+          AGTCTACGTACTCATTACTCAACCTTCGCCTGCTTCAACTACAAACATTTGACATACTTG
rJMFF031A02+          AGTCTACGTACTCATTACTCAACCTTCGCCTGCTTCAACTACAAACATTTGACATACTTG
                      ____________________________________________________________
consensus             AGTCTACGTACTCATTACTCAACCTTCGCCTGCTTCAACTACAAACATTTGACATACTTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF001K01+          AAGACAGGCGTACCAAGTGTTGTTGTTCATTACCCCGTCTTGTACCCTACATCAATGATT
rJMFF031A02+          AAGACAGGCGTACCAAGTGTTGTTGTTCATTACCCCGTCTTGTACCCTACATCAATGATT
                      ____________________________________________________________
consensus             AAGACAGGCGTACCAAGTGTTGTTGTTCATTACCCCGTCTTGTACCCTACATCAATGATT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF001K01+          CTACTCGGGCTGAAATCATTTTTCACCCTCCCCAGTGTCAAATAGGCCTACAAATTACAC
rJMFF031A02+          CTACTCGGGCTGAAATCATTTTTCACCCTCCCCAGTGTCAAATAGGCCTACAAATTACAC
                      ____________________________________________________________
consensus             CTACTCGGGCTGAAATCATTTTTCACCCTCCCCAGTGTCAAATAGGCCTACAAATTACAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF001K01+          ATTTCACCTTTTGCTTTTTGGTTGCTAGGGACAGGATCTATCATCTTCTACATCTCTCTC
rJMFF031A02+          ATTTCACCTTTTGCTTTTTGGTTGCTAGGGACAGGATCTATCATCTTCTACATCTCTCTC
                      ____________________________________________________________
consensus             ATTTCACCTTTTGCTTTTTGGTTGCTAGGGACAGGATCTATCATCTTCTACATCTCTCTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF001K01+          CCCATTTTGGTCAAAGTTCAATGTAATTATGTATTACTAT                    
rJMFF031A02+          CCCATTTTGGTCAAAGTTCAATGTAATTATGTATTACTATTGATATAATGAATACTAATA
                      ____________________________________________________________
consensus             CCCATTTTGGTCAAAGTTCAATGTAATTATGTATTACTATTGATATAATGAATACTAATA