Contig 002614:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF030G21Sequence519006409 (2)ref|XP_011081570.1|6e-62PREDICTED: DEAD-box ATP-dependent RNA helicase 56-like isoform X1 [Sesamum indi636002614 (3)gb|ACF86701.1|3e-65unknown [Zea mays]
JMSF009A03Sequence278006409 (2)760002614 (3)gb|EPS66777.1|6e-105hypothetical protein M569_07999 [Genlisea aurea]
JMSF018I08Sequence245014041 (8)ref|XP_002515525.1|2e-47dead box ATP-dependent RNA helicase, putative [Ricinus communis] gb|EEF46974.1| 735002614 (3)gb|EPS66777.1|2e-92hypothetical protein M569_07999 [Genlisea aurea]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF009A03+ GA
                      ____________________________________________________________
consensus GA
 
. : . : . : . : . : . :
rJMSF009A03+ GAAAAATCGGAAACTGAATGACTTGCTTGATGCTCTGGACTTTAATCAAGTTGTTATCTT
rJMSF018I08+ AATCAAGTTGTTATCTT
                      ____________________________________________________________
consensus GAAAAATCGGAAACTGAATGACTTGCTTGATGCTCTGGACTTTAATCAAGTTGTTATCTT
 
. : . : . : . : . : . :
rJMSF009A03+ TGTCAAAAGTGTGAATAGGGCTGCTGAGCTAAACAAGTTACTTGTTGAATGTAATTTTCC
rJMSF018I08+ NGTCAAAAGTGTGAATAGGGCTGCTGAGCTAAACAAGTTACTTGTTGAATGTAATTTTCC
                      ____________________________________________________________
consensus TGTCAAAAGTGTGAATAGGGCTGCTGAGCTAAACAAGTTACTTGTTGAATGTAATTTTCC
 
. : . : . : . : . : . :
rJMSF009A03+ ATCAATCTGCATCCACTCTGGCATGTCTCAGGAAGAGAGACTGACACGTTACAAGGGTTT
rJMSF018I08+ ATCAATCTGCATCCACTCTGGCATGTCTCAGGAAGAGAGACTGACACGTTACAAGGGTTT
rJMFF030G21+ GAGAGACTGACACGTTACAAGGGTTT
                      ____________________________________________________________
consensus ATCAATCTGCATCCACTCTGGCATGTCTCAGGAAGAGAGACTGACACGTTACAAGGGTTT
 
. : . : . : . : . : . :
rJMSF009A03+ CAAGGAGGGGCACAAGAGAATTCTTGTTGCTACTGATTTGGTTGGCAGGGGCATTGATAT
rJMSF018I08+ CAAGGAGGGGCACAAGAGAATTCTTGTTGCTACTGATTTGGTTGGCAGGGGCATTGATAT
rJMFF030G21+ CAAGGAGGGGCACAAGAGAATTCTTGTTGCTACTGATTTGGTTGGCAGGGGCATTGATAT
                      ____________________________________________________________
consensus CAAGGAGGGGCACAAGAGAATTCTTGTTGCTACTGATTTGGTTGGCAGGGGCATTGATAT
 
. : . : . : . : . : . :
rJMSF009A03+ TGAACGGGTTAACATTGTCATTAACTATGACATGCCCGACTCTGCTGACACTTACCTTCA
rJMSF018I08+ TGAACGGGTTAACATTGTCATTAACTATGACATGCCCGACTCTGCTGACACTTACCTTCA
rJMFF030G21+ TGAACGGGTTAACATTGTCATTAACTATGACATGCCCGACTCTGCTGACACTTACCTTCA
                      ____________________________________________________________
consensus TGAACGGGTTAACATTGTCATTAACTATGACATGCCCGACTCTGCTGACACTTACCTTCA
 
. : . : . : . : . : . :
rJMSF009A03+ CAGGGTGGGTCGAGCTGGTCGGTTTGGCACTAAGGGTCTTGCTATAACTTTTGTTTCATC
rJMSF018I08+ CAGGGTGGGTCGAGCTGGTCGGTTTGGCACTAAGGGTCTTGCTATAACTTTTGTTTCATC
rJMFF030G21+ CAGGGTGGGTCGAGCTGGTCGGTTTGGCACTAAGGGTCTTGCTATAACTTTTGTTTCATC
                      ____________________________________________________________
consensus CAGGGTGGGTCGAGCTGGTCGGTTTGGCACTAAGGGTCTTGCTATAACTTTTGTTTCATC
 
. : . : . : . : . : . :
rJMSF009A03+ ATCATCAGATTCAGATGTACTGAATCAGGTTCAGGAAAGGTTCGAAGTTGATATCAAAGA
rJMSF018I08+ ATCATCAGATTCAGATGTACTGAATCAGGTTCAGGAAAGGTTCGAAGTTGATATCAAAGA
rJMFF030G21+ ATCATCAGATTCAGATGTACTGAATCAGGTTCAGGAAAGGTTCGAAGTTGATATCAAAGA
                      ____________________________________________________________
consensus ATCATCAGATTCAGATGTACTGAATCAGGTTCAGGAAAGGTTCGAAGTTGATATCAAAGA
 
. : . : . : . : . : . :
rJMSF009A03+ GCTACCTGAGCAGATCGATACTTCTACTTATATGCCATCGTAATGAAATGGGGCGCAGTT
rJMSF018I08+ GCTACCTGAGCAGATCGATACTTCTACTTATATGCCATCGTAATGAAATGGGGCGCAGTT
rJMFF030G21+ GCTACCTGAGCAGATCGATACTTCTACTTATATGCCATCGTAATGAAATGGGGCGCAGTT
                      ____________________________________________________________
consensus GCTACCTGAGCAGATCGATACTTCTACTTATATGCCATCGTAATGAAATGGGGCGCAGTT
 
. : . : . : . : . : . :
rJMSF009A03+ GCCTTCAAGAATTGTGAGTGATGAGCAAATAGTTTGCAAGGAGAGAAGTAATTCCTGGCT
rJMSF018I08+ GCCTTCAAGAATTGTGAGTGATGAGCAAATAGTTTGCAAGGAGAGAAGTAATTCCTGGCT
rJMFF030G21+ GCCTTCAAGAATTGTGAGTGATGAGCAAATAGTTTGCAAGGAGAGAAGTAATTCCTGGCT
                      ____________________________________________________________
consensus GCCTTCAAGAATTGTGAGTGATGAGCAAATAGTTTGCAAGGAGAGAAGTAATTCCTGGCT
 
. : . : . : . : . : . :
rJMSF009A03+ CGCGTGTTTTCATCTATATGCTATCGAATGTTTTGTACCATTTATGAAGACGTAGTGTTT
rJMSF018I08+ CGCGTGTTTTCATCTATATGCTATCGAATGTTTTGTACCATTTATGAAGACGTAGTGTTT
rJMFF030G21+ CGCGTGTTTTCATCTATATGCTATCGAATGTTTTGTACCATTTATGAAGACGTAGTGTTT
                      ____________________________________________________________
consensus CGCGTGTTTTCATCTATATGCTATCGAATGTTTTGTACCATTTATGAAGACGTAGTGTTT
 
. : . : . : . : . : . :
rJMSF009A03+ ACCTGCCTACCACATCATCGCATAGATCTAGGTTTATATTCCTGACTAGCTTTACCTGAC
rJMSF018I08+ ACCTGCCTACCACATCATCGCATAGATCTAGGTTTATATTCCTGACTAGCTTTACCTGAC
rJMFF030G21+ ACCTGCCTACCACATCATCGCATAGATCTAGGTTTATATTCCTGACTAGCTTTACCTGAC
                      ____________________________________________________________
consensus ACCTGCCTACCACATCATCGCATAGATCTAGGTTTATATTCCTGACTAGCTTTACCTGAC
 
. : . : . : . : . : . :
rJMSF009A03+ ATTATATTTATCAGTTTTCTAGATGTCAGCTAAATATTTTGGGTAATAGATTTTTTTGAG
rJMSF018I08+ ATTATATTTATCAGTTTTCTAGATGTCAGCTAAATATTTTGGGTAATAGATTTTTTTGAG
rJMFF030G21+ ATTATATTTATCAGTTTTCTAGATGTCAGCTAAATATTTTGGGTAATAGATTTTTTTGAG
                      ____________________________________________________________
consensus ATTATATTTATCAGTTTTCTAGATGTCAGCTAAATATTTTGGGTAATAGATTTTTTTGAG
 
. : . : . : . : . : . :
rJMSF009A03+ GTCAGTACCAAATAGATTGTTGGTGATGTAATATGTAT
rJMSF018I08+ GTCAGTACCAAATAGATTGTTGGTGATGTAATATGTATGGTTCAAAGTAGACGACCTA
rJMFF030G21+ GTCAGTACCAAATAGATTGTTGGTGATGTAATATGTATGGTTCAAAGTAGACGACCTAAC
                      ____________________________________________________________
consensus GTCAGTACCAAATAGATTGTTGGTGATGTAATATGTATGGTTCAAAGTAGACGACCTAAC