Contig 002608:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFF029I06-                          CCCGTGGGTATTCCCCGCACCCGCAAAATCCCCACGGGGGCAGGT
JMFF029I17-                          CCCGTGGGTATTCCCCGCACCCGCAAAATCCCCACGGGGGCAGGT
                      ____________________________________________________________
consensus                            CCCGTGGGTATTCCCCGCACCCGCAAAATCCCCACGGGGGCAGGT
 
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JMFF029I06-           ATGGGAAGGAATTTCATTACCCGCGCAGGTGCGGGTGCGGGTATGGGGAGTGGTGTGGGT
JMFF029I17-           ATGGGAAGGAATTTCATTACCCGCGCAGGTGCGGGTGCGGGTATGGGGAGTGGTGTGGGT
                      ____________________________________________________________
consensus             ATGGGAAGGAATTTCATTACCCGCGCAGGTGCGGGTGCGGGTATGGGGAGTGGTGTGGGT
 
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JMFF029I06-           TGCGTTGTGGTTGCTGAGGGGGGTGTGGATGTGGCTCCTCCTGGCGATGTGGATGTGGCT
JMFF029I17-           TGCGTTGTGGTTGCTGAGGGGGGTGTGGATGTGGCTCCTCCTGGCGATGTGGATGTGGCT
rJMFF029I17+                    TTGCTGAGGGGGGTGTGGATGTGGCTCCTCCTGGCGATGTGGATGTGGCT
rJMFF029I06+                    TTGCTGAGGGGGGTGTGGATGTGGCTCCTCCTGGCGATGTGGATGTGGCT
                      ____________________________________________________________
consensus             TGCGTTGTGGTTGCTGAGGGGGGTGTGGATGTGGCTCCTCCTGGCGATGTGGATGTGGCT
 
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JMFF029I06-           CTTCCTGGCGATGTCGTCGTGGCTCCTCCTGGCGATGTCGTCGTTGACTATTTTTTGGAA
JMFF029I17-           CTTCCTGGCGATGTCGTCGTGGCTCCTCCTGGCGATGTCGTCGTTGACTATTTTTTGGAA
rJMFF029I17+          CTTCCTGGCGATGTCGTCGTGGCTCCTCCTGGCGATGTCGTCGTTGACTATTTTTTGGAA
rJMFF029I06+          CTTCCTGGCGATGTCGTCGTGGCTCCTCCTGGCGATGTCGTCGTTGACTATTTTTTGGAA
                      ____________________________________________________________
consensus             CTTCCTGGCGATGTCGTCGTGGCTCCTCCTGGCGATGTCGTCGTTGACTATTTTTTGGAA
 
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JMFF029I06-           GGACTACCCATAAAAACAGTCAGGTGTTCCCAATGTCCTANGGATCGAGCTTGCTACTTT
JMFF029I17-           GGACTACCCATAAAAACAGTCAGGNGTTCCCAATGTCCTAGGGATCGAGCTTGCTACTTT
rJMFF029I17+          GGACTACCCATAAAAACAGTCAGGTGTTCCCAATGTCCTAGGGATCGAGCTTGCTACTTT
rJMFF029I06+          GGACTACCCATAAAAACAGTCAGGTGTTCCCAATGTCCTAGGGATCGAGCTTGCTACTTT
                      ____________________________________________________________
consensus             GGACTACCCATAAAAACAGTCAGGTGTTCCCAATGTCCTAGGGATCGAGCTTGCTACTTT
 
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JMFF029I06-           ACNACCCCATGCGAGA                                            
JMFF029I17-           ACGACCCCATGCGAGATGGANAGTTCAGGATTACCTTCATTTGCTGCGGCTGTGACCACA
rJMFF029I17+          ACGACCCCATGCGAGATGGAGAGTTCAGGATTACCTTCATTTGCTGCGGCTGTGACCACA
rJMFF029I06+          ACGACCCCATGCGAGATGGAGAGTTCAGGATTACCTTCATTTGCTGCGGCTGTGACCACA
                      ____________________________________________________________
consensus             ACGACCCCATGCGAGATGGAGAGTTCAGGATTACCTTCATTTGCTGCGGCTGTGACCACA
 
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JMFF029I17-           GATGGATAGATGGAGAGGAGTATTTGATACACAGTATGGATCTCTCTCTCTTGCTCATGG
rJMFF029I17+          GATGGATAGATGGAGAGGAGTATTTGATACACAGTATGGATCTCTCTCTCTTGCTCATGG
rJMFF029I06+          GATGGATAGATGGAGAGGAGTATTTGATACACAGTATGGATCTCTCTCTCTTGCTCATGG
                      ____________________________________________________________
consensus             GATGGATAGATGGAGAGGAGTATTTGATACACAGTATGGATCTCTCTCTCTTGCTCATGG
 
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JMFF029I17-           TTATACTCATGATTTGAGTC                                        
rJMFF029I17+          TTATACTCATGATTTGAGTCTCTTTTCAGATTTCAAGTGTTTCAGGGGAACTTCGATATA
rJMFF029I06+          TTATACTCATGATTTGAGTCTCTTTTCAGATTTCAAGTGTTTCAGGGGAACTTCGATATA
                      ____________________________________________________________
consensus             TTATACTCATGATTTGAGTCTCTTTTCAGATTTCAAGTGTTTCAGGGGAACTTCGATATA
 
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rJMFF029I17+          CAGATGCATTGGCACTTGTGCACACCCTAGAGGATGCATCAAAAGGGTTTGCTGAATATG
rJMFF029I06+          CAGATGCATTGGCACTTGTGCACACCCTAGAGGATGCATCAAAAGGGTTTGCTGAATATG
                      ____________________________________________________________
consensus             CAGATGCATTGGCACTTGTGCACACCCTAGAGGATGCATCAAAAGGGTTTGCTGAATATG
 
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rJMFF029I17+          TAAATGCCACTCTTGCCCGTCTCCATCCAATTCATTGCACAAGGAACCGGAAAGTTGATG
rJMFF029I06+          TAAATGCCACTCTTGCCCGTCTCCATCCAATTCATTGCACAAGGAACCGGAAAGTTGATG
                      ____________________________________________________________
consensus             TAAATGCCACTCTTGCCCGTCTCCATCCAATTCATTGCACAAGGAACCGGAAAGTTGATG
 
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rJMFF029I17+          TTGAGTTTGACATGACAACCATACCTGCCTTTCTGGTCGTTGTCTCCATTCTGTGGTTTG
rJMFF029I06+          TTGAGTTTGACATGACAACCATACCTGCCTTTCTGGTCGTTGTCTCCATTCTGTGGTTTG
                      ____________________________________________________________
consensus             TTGAGTTTGACATGACAACCATACCTGCCTTTCTGGTCGTTGTCTCCATTCTGTGGTTTG
 
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rJMFF029I17+          TTTTGAGGCCAAGAAGACAAAAGCCTAAGATCAACTGAAGTTTTTCTTCCTATGCTGAGA
rJMFF029I06+          TTTTGAGGCCAAGAAGACAAAAGCCTAAGATCAACTGAAGTTTTTCTTCCTATGCTGAGA
                      ____________________________________________________________
consensus             TTTTGAGGCCAAGAAGACAAAAGCCTAAGATCAACTGAAGTTTTTCTTCCTATGCTGAGA
 
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rJMFF029I17+          ATTAGTTAGTTATCATAAATGGCTTACTGGCAACTTGTGACAAAGCCCACTCTGACTGCA
rJMFF029I06+          ATTAGTTAGTTATCATAAATGGCTTACTGGCAACTTGTGACAAAGCCCACTCTGACTGCA
                      ____________________________________________________________
consensus             ATTAGTTAGTTATCATAAATGGCTTACTGGCAACTTGTGACAAAGCCCACTCTGACTGCA
 
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rJMFF029I17+          GGAAAAATTTTGATTCCAAAACAGTGATCTTTTTTCTAGTGCCCTCTATTTATT      
rJMFF029I06+          GGAAAAATTTTGATTCCAAAACAGTGATCTTTTTTCTAGTGCCCTCTATTTATTTGATCA
                      ____________________________________________________________
consensus             GGAAAAATTTTGATTCCAAAACAGTGATCTTTTTTCTAGTGCCCTCTATTTATTTGATCA