Contig 002605:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF011M15Sequence277012849 (5)679002605 (3)ref|XP_010252987.1|2e-93PREDICTED: BTB/POZ domain-containing protein At1g55760-like [Nelumbo nucifera]
JMFF025E02Sequence544012849 (5)emb|CBI39826.3|3e-28unnamed protein product [Vitis vinifera]688002605 (3)ref|XP_009777616.1|3e-81PREDICTED: BTB/POZ domain-containing protein At1g55760 [Nicotiana sylvestris]
JMFF028J23Sequence507012849 (5)gb|KJB63095.1|4e-21hypothetical protein B456_009G453000 [Gossypium raimondii]679002605 (3)ref|XP_010252987.1|1e-91PREDICTED: BTB/POZ domain-containing protein At1g55760-like [Nelumbo nucifera]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF025E02+                           GCATACAGAGAATGAGTCGAATGCGACTGCCTTGATATCTNTG
                      ____________________________________________________________
consensus                              GCATACAGAGAATGAGTCGAATGCGACTGCCTTGATATCTNTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF025E02+          GGCCGAATGTTGTCCGAAAGCATCCACACCGACATCCAAATCAACACTGCAGACGGGAGC
rJMFF011M15+                                                  TCAACACTGCAGACGGGAGC
rJMFF028J23+                                                  TCAACACTGCAGACGGGAGC
                      ____________________________________________________________
consensus             GGCCGAATGTTGTCCGAAAGCATCCACACCGACATCCAAATCAACACTGCAGACGGGAGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF025E02+          ATTGCCGCCCACCGAGCCGTCCTCGCTGCGAGGTCGCCCGTCTTCCGAAGCATGTTCTCT
rJMFF011M15+          ATTGCCGCCCACCGAGCCGTCCTCGCTGCGAGGTCGCCCGTCTTCCGAAGCATGTTCTCT
rJMFF028J23+          ATTGCCGCCCACCGAGCCGTCCTCGCTGCGAGGTCGCCCGTCTTCCGAAGCATGTTCTCT
                      ____________________________________________________________
consensus             ATTGCCGCCCACCGAGCCGTCCTCGCTGCGAGGTCGCCCGTCTTCCGAAGCATGTTCTCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF025E02+          CACGACCTCAAGGAGAAAGAGATGTCCACCGTGGACATCTCCGATTATGTCGGGCGAGGC
rJMFF011M15+          CACGACCTCAAGGAGAAAGAGATGTCCACCGTGGACATCTCCGA-TATGTCGGGCGAGGC
rJMFF028J23+          CACGACCTCAAGGAGAAAGAGATGTCCACCGTGGACATCTCCGA-TAAGTCGGGCGAGGC
                      ____________________________________________________________
consensus             CACGACCTCAAGGAGAAAGAGATGTCCACCGTGGACATCTCCGA-TATGTCGGGCGAGGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF025E02+          TTGCCAGGCTTTCCTCAATTACATATACGGGAACATCCAGAACGGGGAATTCTTGACCCA
rJMFF011M15+          TTGCCAGGCTTTCCTCAATTACATATACGGGAACATCCAGAACGGGGAATTCTTGACCCA
rJMFF028J23+          TTGCCAGGCTTTCCTCAATTACATATACGGGAACATCCAGAACGGGGAATTCTTGACCCA
                      ____________________________________________________________
consensus             TTGCCAGGCTTTCCTCAATTACATATACGGGAACATCCAGAACGGGGAATTCTTGACCCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF025E02+          CCGGTTACCCCTGCTCCGGGCAGCCGACAAGTACGACGTCACGGACCTGAAAGAGGCGTG
rJMFF011M15+          CCGGTTACCCCTGCTCCGGGCAGCCGACAAGTACGACGTCACGGACCTGAAAGAGGCGTG
rJMFF028J23+          CCGGTTACCCCTGCTCCGGGCAGCCGACAAGTACGACGTCACGGACCTGAAAGAGGCGTG
                      ____________________________________________________________
consensus             CCGGTTACCCCTGCTCCGGGCAGCCGACAAGTACGACGTCACGGACCTGAAAGAGGCGTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF025E02+          CCACGAGAGCCTGCTGCAGGACATTGACACCAAGAACGTTCTCGAGAGGCTCCAAAACGC
rJMFF011M15+          CCACGAGAGCCTGCTGCAGGACATTGACACCAAGAACGTTCTCGAGAGGCTCCAAAACGC
rJMFF028J23+          CCACGAGAGCCTGCTGCAGGACATTGACACCAAGAACGTTCTCGAGAGGCTCCAAAACGC
                      ____________________________________________________________
consensus             CCACGAGAGCCTGCTGCAGGACATTGACACCAAGAACGTTCTCGAGAGGCTCCAAAACGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF025E02+          CTCGCTTTATCAGCTCCCGAAGCTCAAGGCTTGTTGCATGCAGTATCTCGTGAAGTTCGG
rJMFF011M15+          CTCGCTTTATCAGCTCCCGAAGCTCAAGGCTTGTTGCATGCAGTATCTCGTGAAGTTCGG
rJMFF028J23+          CTCGCTTTATCAGCTCCCGAAGCTCAAGGCTTGTTGCATGCAGTATCTCGTGAAGTTCGG
                      ____________________________________________________________
consensus             CTCGCTTTATCAGCTCCCGAAGCTCAAGGCTTGTTGCATGCAGTATCTCGTGAAGTTCGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF025E02+          TAAGATTTATGACATTCACGACGATTTTAATGTGTTTCTGCAATATGCAGATAGAGAGCT
rJMFF011M15+          TAAGATTTATGACATTCACGACGATTTTAATGTGTTTCTGCAATATGCAGATAGAGAGCT
rJMFF028J23+          TAAGATTTATGACATTCACGACGATTTTAATGTGTTTCTGCAATATGCAGATAGAGAGCT
                      ____________________________________________________________
consensus             TAAGATTTATGACATTCACGACGATTTTAATGTGTTTCTGCAATATGCAGATAGAGAGCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF025E02+          GATTTCTGAAGTCTTTCATGAAATTCTTGGTGTCTGGAAAGGGTTCTGAATTTCTGGGTT
rJMFF011M15+          GATTTCTGAAGTCTTTCATGAAATTCTTGGTGTCTGGAAAGGGTTCTGAATTTCTGGGTT
rJMFF028J23+          GATTTCTGAAGTCTTTCATGAAATTCTTGGTGTCTGGAAAGGGTTCTGAATTTCTGGGTT
                      ____________________________________________________________
consensus             GATTTCTGAAGTCTTTCATGAAATTCTTGGTGTCTGGAAAGGGTTCTGAATTTCTGGGTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF025E02+          GAAGAAAGTGAGGAAGGAATTCATTGGGAATGTTTGTATCAAATTGTTATTGGTGTTTCA
rJMFF011M15+          GAAGAAAGTGAGGAAGGAATTCATTGGGAATGTTTGTATCAAATTGTTATTGGTGTTTCA
rJMFF028J23+          GAAGAAAGTGAGGAAGGAATTCATTGGGAATGTTTGTATCAAATTGTTATTGGTGTTTCA
                      ____________________________________________________________
consensus             GAAGAAAGTGAGGAAGGAATTCATTGGGAATGTTTGTATCAAATTGTTATTGGTGTTTCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF025E02+          GTTGTGTGCAACCATTTGTTCATTGGATAAAATTTGTT                      
rJMFF011M15+          GTTGTGTGCAACCATTTGTTCATTGGATAAAATTTGTTTGTTCAATGGAATTNGTCTGTG
rJMFF028J23+          GTTGTGTGCAACCATTTGTTCATTGGATAAAATTTGTTTGTTCAATGGAATTTGTCTGTG
                      ____________________________________________________________
consensus             GTTGTGTGCAACCATTTGTTCATTGGATAAAATTTGTTTGTTCAATGGAATTTGTCTGTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF011M15+          TATATAATTTATATATACCTAGACATGTACAGATCAATTTCACCAACTGAACAGATCA  
rJMFF028J23+          TATATAATTTATATATACCTAGACATGTACAGATCAATTTCACCAACTGAACAGATCATG
                      ____________________________________________________________
consensus             TATATAATTTATATATACCTAGACATGTACAGATCAATTTCACCAACTGAACAGATCATG