Contig 002604:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF028B18Sequence496002604 (2)ref|XP_004237828.1|1e-69PREDICTED: xanthoxin dehydrogenase-like [Solanum lycopersicum]761002604 (2)ref|XP_009789920.1|7e-98PREDICTED: xanthoxin dehydrogenase-like [Nicotiana sylvestris]

Alignment

This contig is upended


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JMFF028B18-                                                GTTGCTATCAGCAATGGCAGACA
                      ____________________________________________________________
consensus                                                  GTTGCTATCAGCAATGGCAGACA
 
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JMFF028B18-           GTACTGGTACTGAAGCTCCTCTTCCTATCCAATGCCAAAGGCTATTCGGGAAAGTTGCGT
                      ____________________________________________________________
consensus             GTACTGGTACTGAAGCTCCTCTTCCTATCCAATGCCAAAGGCTATTCGGGAAAGTTGCGT
 
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JMFF028B18-           TAGTGACTGGGGGTGCGAGTGGGATAGGGGAGAGCATCGTTCGTCTATTTCACAAGCAGG
                      ____________________________________________________________
consensus             TAGTGACTGGGGGTGCGAGTGGGATAGGGGAGAGCATCGTTCGTCTATTTCACAAGCAGG
 
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JMFF028B18-           GTGCGAAAGTTTGTGTTGCAGACATTCAAGATGATCTTGGTCAGCAAATCTGCAGATCCC
                      ____________________________________________________________
consensus             GTGCGAAAGTTTGTGTTGCAGACATTCAAGATGATCTTGGTCAGCAAATCTGCAGATCCC
 
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JMFF028B18-           TCGGGGGCGAGTCCAGTATATGTTTCGTCCACTGTGATGTCTCGCTCGAAGACGATGTTA
                      ____________________________________________________________
consensus             TCGGGGGCGAGTCCAGTATATGTTTCGTCCACTGTGATGTCTCGCTCGAAGACGATGTTA
 
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JMFF028B18-           GTCGCTCGGTGGACTTTGCAGTTGATAAGTTTGGCACGCTCGACGTAATAGTGAACAATG
rJMFF028B18+                             AGTTGATAAGTTTGGCACGCTCGACGTAATAGTGAACAATG
                      ____________________________________________________________
consensus             GTCGCTCGGTGGACTTTGCAGTTGATAAGTTTGGCACGCTCGACGTAATAGTGAACAATG
 
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JMFF028B18-           CTGGTCTGTCAGGGCCGGCTGTTCCAGATATCCGGGACTTTGAGCTGTCAGTATTCGAGA
rJMFF028B18+          CTGGTCTGTCAGGGCCGGCTGTTCCAGATATCCGGGACTTTGAGCTGTCAGTATTCGAGA
                      ____________________________________________________________
consensus             CTGGTCTGTCAGGGCCGGCTGTTCCAGATATCCGGGACTTTGAGCTGTCAGTATTCGAGA
 
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JMFF028B18-           AGATACTTGATGTGAATGTGAAAGGCGTTTTCCTGGGGATGAAGCACGCTGCTCGGGTAA
rJMFF028B18+          AGATACTTGATGTGAATGTGAAAGGCGTTTTCCTGGGGATGAAGCACGCTGCTCGGGTAA
                      ____________________________________________________________
consensus             AGATACTTGATGTGAATGTGAAAGGCGTTTTCCTGGGGATGAAGCACGCTGCTCGGGTAA
 
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JMFF028B18-           TGATCCCGCTGGGGAAGGGCTCGATAGTGTCTATCAGCAGCGTTGCGAGTGCG       
rJMFF028B18+          TGATCCCGCTGGGGAAGGGCTCGATAGTGTCTATCAGCAGCGTTGCGAGTGCGATTGCTG
                      ____________________________________________________________
consensus             TGATCCCGCTGGGGAAGGGCTCGATAGTGTCTATCAGCAGCGTTGCGAGTGCGATTGCTG
 
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rJMFF028B18+          GAATTGGACCGCACTCATACACAGCCTCAAAGCACGCGGTCTTGGGGCTAACTCAGAACG
                      ____________________________________________________________
consensus             GAATTGGACCGCACTCATACACAGCCTCAAAGCACGCGGTCTTGGGGCTAACTCAGAACG
 
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rJMFF028B18+          TGGCTGCAGAGCTGGGGAAACACGGGATCCGGGTGAACTGCGTGGGCCCTTACGCCGTTG
                      ____________________________________________________________
consensus             TGGCTGCAGAGCTGGGGAAACACGGGATCCGGGTGAACTGCGTGGGCCCTTACGCCGTTG
 
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rJMFF028B18+          CCACGCCCTTAGCGCTGGCTCACTTGCCCGAGGACGAGAGAACCGAGGAAGCGTGGGAAG
                      ____________________________________________________________
consensus             CCACGCCCTTAGCGCTGGCTCACTTGCCCGAGGACGAGAGAACCGAGGAAGCGTGGGAAG
 
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rJMFF028B18+          GGTTTCGGGCGTTTGCAGCCCGAAACGCTAACTTGCAGGGCGTGGAGTTGACCGCCCGGG
                      ____________________________________________________________
consensus             GGTTTCGGGCGTTTGCAGCCCGAAACGCTAACTTGCAGGGCGTGGAGTTGACCGCCCGGG
 
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rJMFF028B18+          ATGTTGCCAATGCTGTGCTGTTCTTAGCTAGTGATGAAGCAAGGTATGTTAGTGGGGTGA
                      ____________________________________________________________
consensus             ATGTTGCCAATGCTGTGCTGTTCTTAGCTAGTGATGAAGCAAGGTATGTTAGTGGGGTGA
 
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rJMFF028B18+          ACCTTATGGTGGATGGTGGTTTCTCTTGTGTCAATCATTCTCTTCGAGTCTTTAGAGGAT
                      ____________________________________________________________
consensus             ACCTTATGGTGGATGGTGGTTTCTCTTGTGTCAATCATTCTCTTCGAGTCTTTAGAGGAT
 
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rJMFF028B18+          AACGCCATAACGGCCTTGTTTGACAATCAGCAGATACCGGTTAGCGGTTAATGTAAACAT
                      ____________________________________________________________
consensus             AACGCCATAACGGCCTTGTTTGACAATCAGCAGATACCGGTTAGCGGTTAATGTAAACAT
 
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rJMFF028B18+          GTATCTTTGCCTTAGCATTCAAAATTCAGATTTGATGAGATCAATGTATTATGTATCATA
                      ____________________________________________________________
consensus             GTATCTTTGCCTTAGCATTCAAAATTCAGATTTGATGAGATCAATGTATTATGTATCATA
 
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rJMFF028B18+          TGCACAAGAATCTCAAATCTGTGTACCAAATTGCTGTATTTGTATCACTTGCAAAAAATG
                      ____________________________________________________________
consensus             TGCACAAGAATCTCAAATCTGTGTACCAAATTGCTGTATTTGTATCACTTGCAAAAAATG