Contig 002599:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF026A03Sequence578008796 (3)ref|XP_009783654.1|79.7PREDICTED: uncharacterized protein LOC104232209 [Nicotiana sylvestris]712002599 (3)ref|XP_009625493.1|151PREDICTED: uncharacterized protein LOC104116360 [Nicotiana tomentosiformis]
JMSF014E22Sequence109008796 (3)676002599 (3)ref|XP_009625493.1|146PREDICTED: uncharacterized protein LOC104116360 [Nicotiana tomentosiformis]
JMSF015E22Sequence212005024 (10)688002599 (3)ref|XP_009625493.1|152PREDICTED: uncharacterized protein LOC104116360 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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rJMSF014E22+                     TTTTATCTACCTGAGAGCAAGCCCTGATACTTGCCACAAGAGAATGATG
rJMSF015E22+                     TTTTATNTACCTGAGAGCAAGCCCTGATACTTGCCACAAGAGAATGATG
rJMFF026A03+                GATGGTTTTATCTACCTGAGAGCAAGCCNTGATACTTGCCACAAGAGAATGATG
                      ____________________________________________________________
consensus                   GATGGTTTTATCTACCTGAGAGCAAGCCCTGATACTTGCCACAAGAGAATGATG
 
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rJMSF014E22+          CTGCGAAAGAGAGCTGAGGAAGGTGGAGTCTCCCTCGAGTATTTGCGAGACTTGCATGAA
rJMSF015E22+          CTGCGAAAGAGAGNTGAGGAAGGTGGAGTNTCCCTNGAGTATCTGCGAGACTTGCATGAA
rJMFF026A03+          CTGCGAAAGAGAGCTGAGGAAGGTGGAGTCTCCCTCGAGTATTTGCGAGACTTGCATGAA
                      ____________________________________________________________
consensus             CTGCGAAAGAGAGCTGAGGAAGGTGGAGTCTCCCTCGAGTATTTGCGAGACTTGCATGAA
 
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rJMSF014E22+          AAGCATGAGAACTGGCTTTTCCCATTCGAAAGTGGAAATCATGGGATTTTATCAGTCAGT
rJMSF015E22+          AAGCATGAGAACTGGCTTTTCCCATTCGAAAGTGGAAATCATGGGATTTTATCAGTCAGT
rJMFF026A03+          AAGCATGAGAACTGGCTTTTCCCATTCGAAAGTGGAAATCATGGGATTTTATCAGTCAGT
                      ____________________________________________________________
consensus             AAGCATGAGAACTGGCTTTTCCCATTCGAAAGTGGAAATCATGGGATTTTATCAGTCAGT
 
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rJMSF014E22+          CAACTGCCACAGAGCTTTGACAATTCCTTACCTTCAGAGATTAGGGATCGAGTTTTTTTA
rJMSF015E22+          CAACTGCCACNGAGCTTTGACAATTCNTTACCTTCNGAGATTAGGGATCGAGTTTTTTTA
rJMFF026A03+          CAACTGCCACAGAGCTTTGACAATTCCTTACCTTCAGAGATTAGGGATCGAGTTTTTTTA
                      ____________________________________________________________
consensus             CAACTGCCACAGAGCTTTGACAATTCCTTACCTTCAGAGATTAGGGATCGAGTTTTTTTA
 
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rJMSF014E22+          TTTGGAGGGTAATCATATGCATCCAAGTATTCAAAAGGTTCCTGCTTTGGTCCTTGATTG
rJMSF015E22+          TTTGGAGGGTAATCATATGCATCCAAGTATTCAAAAGGTTCCTGCTTTGGTCCTTGATTG
rJMFF026A03+          TTTGGAGGGTAATCATATGCATCCAAGTATTCAAAAGGTTCCTGCTTTGGTCCTTGATTG
                      ____________________________________________________________
consensus             TTTGGAGGGTAATCATATGCATCCAAGTATTCAAAAGGTTCCTGCTTTGGTCCTTGATTG
 
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rJMSF014E22+          TGAGCCCAACATTGACTTCAATAAAGATATTGAAGCAAAGAGACAGTACGCTCGCCAGGT
rJMSF015E22+          TGAGCCCAACATTGACTTCAATAAAGATATTGAAGCAAAGAGNCAGTACGCTCNCCAGGT
rJMFF026A03+          TGAGCCCAACATTGACTTCAATAAAGATATTGAAGCAAAGAGACAGTACGCTCGCCAGGT
                      ____________________________________________________________
consensus             TGAGCCCAACATTGACTTCAATAAAGATATTGAAGCAAAGAGACAGTACGCTCGCCAGGT
 
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rJMSF014E22+          TGCTGAATTCTTCGAATTTGTGAAGAAAAAGAAAGAAGTTAACGCTCCTGGAGCTGGTGA
rJMSF015E22+          TGCTGAATTCTTNGAATNTGTGAAGAAAAAGAAAGAAGTTAACGCTCCTGGAGCTGGTGA
rJMFF026A03+          TGCTGAATTCTTCGAATTTGTGAAGAAAAAGAAAGAAGTTAACGCTCCTGGAGCTGGTGA
                      ____________________________________________________________
consensus             TGCTGAATTCTTCGAATTTGTGAAGAAAAAGAAAGAAGTTAACGCTCCTGGAGCTGGTGA
 
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rJMSF014E22+          AGATTCAACGAAGGGTAATCAACCAGAGGTGCTGCTGCCTGACAGACCGGGATTGTGGGT
rJMSF015E22+          AGATTCAACGAAGGGTAATCAACCAGAGGTGNTGCTGCCTGNCAGACCGGGATTGTGGGT
rJMFF026A03+          AGATTCAACGAAGGGTAATCAACCAGAGGTGCTGCTGCCTGACAGACCGGGATTGTGGGT
                      ____________________________________________________________
consensus             AGATTCAACGAAGGGTAATCAACCAGAGGTGCTGCTGCCTGACAGACCGGGATTGTGGGT
 
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rJMSF014E22+          ACCTGAGGGCAAATTCTCAGAGTCAGGCCTAAAATNTTNGGATTTTNGACGAATCAATGT
rJMSF015E22+          ACCTGAGGGCAAATTCTCAGAGTCAGGCCTAAAATCTTTGGATTTTAGACGAA-CAATGT
rJMFF026A03+          ACCTGAGGGCAAATTCTCAGAGTCAGGCCTAAAATCTTTGGATTTTAGACGAA-CAATGT
                      ____________________________________________________________
consensus             ACCTGAGGGCAAATTCTCAGAGTCAGGCCTAAAATCTTTGGATTTTAGACGAA-CAATGT
 
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rJMSF014E22+          CATTTATGTCCCACTAGACTAGAGGGATATCCTTGCCAGNTGCCA-GTACCCAGGAGAAG
rJMSF015E22+          CATTTATGTCCCACTAGACTAGAGGGATATCCTTNCCAGTTGCCATGTACCCAGGAGAAG
rJMFF026A03+          CATTTATGTCCCACTAGACTAGAGGGATATCCTTGCCAGTTGCCA-GTACCCAGGAGAAG
                      ____________________________________________________________
consensus             CATTTATGTCCCACTAGACTAGAGGGATATCCTTGCCAGTTGCCA-GTACCCAGGAGAAG
 
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rJMSF014E22+          GGGGTTGGGTTGGGTNGCTGATTAATCAGTCTGCCTGTAAAAAGTTGTAGTNGATTGCTT
rJMSF015E22+          GGGGTTGGGTTGGGTTGTTGATTAATCAGTCTGCCTGTAAAAAGTNGTANTTGATNGCTT
rJMFF026A03+          GGGGTTGGGTTGGGTTGTTGATTAATCAGTCTGCCTGTAAAAAGTTGTAGTTGATTGCTT
                      ____________________________________________________________
consensus             GGGGTTGGGTTGGGTTGTTGATTAATCAGTCTGCCTGTAAAAAGTTGTAGTTGATTGCTT
 
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rJMSF014E22+          AGTCTTGAACCT                                                
rJMSF015E22+          AGTCTTGAACCTTTGACAATGTAGAGNTAACGATGT                        
rJMFF026A03+          AGTCTTGAACCTTTGACAATGTAGAGTTAACGATGTTCCTTTGTGGATGCTATAAGACCA
                      ____________________________________________________________
consensus             AGTCTTGAACCTTTGACAATGTAGAGTTAACGATGTTCCTTTGTGGATGCTATAAGACCA