Contig 002595:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF024J24+                                                                    GT
                      ____________________________________________________________
consensus                                                                       GT
 
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rJMFF035C24+              CCAGATAATCGATTGNCCGGTTGGCCCCGTTACTGAGAAGACCCAAATTAGGNTCA
rJMFF024J24+          CGGTCCAGATAATCGATTGGCCGGTTGG-CCCGTTACTGAGAAGAACCAAATTAGGGTCA
                      ____________________________________________________________
consensus             CGGTCCAGATAATCGATTGGCCGGTTGGCCCCGTTACTGAGAAGACCCAAATTAGGGTCA
 
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rJMFF035C24+          GAAAATGAGGAGAGGTAAGAACACGATAGATCCAGTAAAATTTATGTGCGTACTTGTCTC
rJMFF024J24+          GAAAATGAGGAGAGGTAAGAACACGATAGATCCAGTAAAATTTATGTGCGTACTTGTCTC
                      ____________________________________________________________
consensus             GAAAATGAGGAGAGGTAAGAACACGATAGATCCAGTAAAATTTATGTGCGTACTTGTCTC
 
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rJMFF035C24+          TATTGTTTTCACCTTCATTCTATTCATTTCAATCCTCAAAATCCATGAACTTCCATTGAA
rJMSF001O20+                                                                     A
rJMFF024J24+          TATTGTTTTCACCTTCATTCTATTCATTTCAATCCTCAAAATCCATGAACTTCCATTGAA
                      ____________________________________________________________
consensus             TATTGTTTTCACCTTCATTCTATTCATTTCAATCCTCAAAATCCATGAACTTCCATTGAA
 
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rJMFF035C24+          GAAGGACAATGCAATCCTTTCATGGGGCGGTAAGAAAATCAAGTCGACTTCCAAAGATGC
rJMSF001O20+          GAAGGACAATGCAATCCTTTCATGGGGCGGTAAGAAAATCAAGTCGACTTCCAAAGATGC
rJMFF024J24+          GAAGGACAATGCAATCCTTTCATGGGGCGGTAAGAAAATCAAGTCGACTTCCAAAGATGC
                      ____________________________________________________________
consensus             GAAGGACAATGCAATCCTTTCATGGGGCGGTAAGAAAATCAAGTCGACTTCCAAAGATGC
 
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rJMFF035C24+          GAAAGTGGGGAAGTTCGGTGGAATGGTGATTGAGATGTTACCTGAAGATCTGGGGTTCAC
rJMSF001O20+          GAAAGTGGGGAAGTTCGGTGGAATGGTGATTGAGATGTTACCTGAAGATCTGGGGTTCAC
rJMFF024J24+          GAAAGTGGGGAAGTTCGGTGGAATGGTGATTGAGATGTTACCTGAAGATCTGGGGTTCAC
                      ____________________________________________________________
consensus             GAAAGTGGGGAAGTTCGGTGGAATGGTGATTGAGATGTTACCTGAAGATCTGGGGTTCAC
 
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rJMFF035C24+          TTTATTTCTACCGTCGGAGGAAGCGTTTGAGCGTAATTTGGGACTGCGGTTAAACGAAAG
rJMSF001O20+          TTTATTTCTACCGTCGGAGGAAGCGTTTGAGCGTGATTTGGGACTGCGGTTAAACGAAAG
rJMFF024J24+          TTTATTTCTACCGTCGGAGGAAGCGTTTGAGCGTAATTTGGGACTGCGGTTAAACGAAAG
                      ____________________________________________________________
consensus             TTTATTTCTACCGTCGGAGGAAGCGTTTGAGCGTAATTTGGGACTGCGGTTAAACGAAAG
 
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rJMFF035C24+          CTTGGCGGAGGAGAAGGTGGATGATACTCATGCAGTACTTACTCGCGTGCTGGGGTTTTC
rJMSF001O20+          CTTGGCGGAGGAGAAGGTGGATGATACTCATGCAGTACTTACTCGCGTGCTGGGGTTTTC
rJMFF024J24+          CTTGGCGGAGGAGAAGGTGGATGATACTCATGCAGTACTTACTCGCGTGCTGGGGTTTTC
                      ____________________________________________________________
consensus             CTTGGCGGAGGAGAAGGTGGATGATACTCATGCAGTACTTACTCGCGTGCTGGGGTTTTC
 
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rJMFF035C24+          CGCCTTGCCGAGGATCATTCATTTGGAGAATGTGGTTTCTGGGGAGGAGATTAGATATGA
rJMSF001O20+          CGCCTTGCCGAGGATCATTCATTTGGAGAATGTGGTTTCTGGGGAGGAGATTAGATATGA
rJMFF024J24+          CGCCTTGCCGAGGATCATTCATTTGGAGAATGTGGTTTCTGGGGAGGAGATTAGATATGA
                      ____________________________________________________________
consensus             CGCCTTGCCGAGGATCATTCATTTGGAGAATGTGGTTTCTGGGGAGGAGATTAGATATGA
 
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rJMFF035C24+          TTCATTGTCTGGTTTCACTTTGTTGATTGTGAAGGATTCGAAGGGTTCATTGGTGGTCAA
rJMSF001O20+          TTCATTGTCTGGTTTCACTTTGTTGATTGTGAAGGATTCGAAGGGTTCATTGGTGGTCAA
rJMFF024J24+          TTCATTGTCTGGTTTCACTTTGTTGATTGTGAAGGATTCGAAGGGTTCATTGGTGGTCAA
                      ____________________________________________________________
consensus             TTCATTGTCTGGTTTCACTTTGTTGATTGTGAAGGATTCGAAGGGTTCATTGGTGGTCAA
 
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rJMFF035C24+          TGGAGTCCGATCGGAAATGGTGGATTTAAGGAGAGGGAAGATTGTTGTTCATGTTATGAA
rJMSF001O20+          TGGAGTCCGATCGGAAATGGTGGATTTAAGGAGAGGGAAGATTGTTGTTCATGTTATGAA
rJMFF024J24+          TGGAGTCCGATCGGAAATGGTGGATTTAAGGAGAGGGAAGATTGTTGTTCATGTTATGAA
                      ____________________________________________________________
consensus             TGGAGTCCGATCGGAAATGGTGGATTTAAGGAGAGGGAAGATTGTTGTTCATGTTATGAA
 
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rJMFF035C24+          TGGTGTGTTAATGGATGCCGAGTTTGAACAGTCTGTTCGTCCAGATTATAGTGGAGGAGA
rJMSF001O20+          TGGTGTGTTAATGGATGCCGAGTTTGAACAGTCTGTTCGTCCAGATTATAGTGGAGGAGA
rJMFF024J24+          TGGTGTGTTAATGGATGCCGAGTTTGAACAGTCTGTTCGTCCAGATTATAGTGGAGGAGA
                      ____________________________________________________________
consensus             TGGTGTGTTAATGGATGCCGAGTTTGAACAGTCTGTTCGTCCAGATTATAGTGGAGGAGA
 
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rJMFF035C24+          TTGATCTTAGTGTAGCTTCTAATGCACTGAAATTTGTTAAAACTCCTTGAAATTGTAGCT
rJMSF001O20+          TTGATCTTAGTGTAGCTTCTAATGCACTGAAATTTGTTAAAACTCCTTGAAATTGTAGCT
rJMFF024J24+          TTGATCTTAGTGTAGCTTCTAATGCACTGAAATTTGTTAAAACTCCTTGAAATTGTAGCT
                      ____________________________________________________________
consensus             TTGATCTTAGTGTAGCTTCTAATGCACTGAAATTTGTTAAAACTCCTTGAAATTGTAGCT
 
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rJMFF035C24+          TGTAATGCAAAATGTACAATTGAAACTAAATATTTTCCAGGCTTGTTTATATTGAATGAT
rJMSF001O20+          TGTAATGCAAAATGTACAATTGAAACTAAATATTT                         
rJMFF024J24+          TGTAATGCAAAATGTACAATTGAAACTAAATATTTTCCAGGCTTGTTTATATTGAATGAT
                      ____________________________________________________________
consensus             TGTAATGCAAAATGTACAATTGAAACTAAATATTTTCCAGGCTTGTTTATATTGAATGAT