Contig 002594:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF024E01Sequence460000606 (3)ref|XP_009630895.1|112PREDICTED: uncharacterized protein LOC104120764 [Nicotiana tomentosiformis]659002594 (2)ref|XP_009787361.1|99.4PREDICTED: uncharacterized protein LOC104235325 [Nicotiana sylvestris]
JMSF044M05Sequence741000606 (3)ref|XP_009630895.1|242PREDICTED: uncharacterized protein LOC104120764 [Nicotiana tomentosiformis]709002594 (2)ref|XP_009787361.1|141PREDICTED: uncharacterized protein LOC104235325 [Nicotiana sylvestris]

Alignment

This contig is upended


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rJMSF044M05+                     GGGGTTTGAGTGGGTTGGATCCTTATGATTTGCATAGCATTGACAGTAT
                      ____________________________________________________________
consensus                        GGGGTTTGAGTGGGTTGGATCCTTATGATTTGCATAGCATTGACAGTAT
 
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rJMSF044M05+          GGATGTTAGGTTTGAGCAACCACTAAGGTTGCCTGGAGGAGATACAAACTCCTTCATCTA
                      ____________________________________________________________
consensus             GGATGTTAGGTTTGAGCAACCACTAAGGTTGCCTGGAGGAGATACAAACTCCTTCATCTA
 
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rJMSF044M05+          CGACACAGTAGATGCTGTAACTCAGCCTTTCTGTGGGGACGAGCCTCTACCCTACTTCGA
rJMFF024E01+          CGACACAGTAGATGCTGTAACTCAGCCTTTCTGTGGGGACGAGCCTCTACCCTACTTCGA
                      ____________________________________________________________
consensus             CGACACAGTAGATGCTGTAACTCAGCCTTTCTGTGGGGACGAGCCTCTACCCTACTTCGA
 
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rJMSF044M05+          TTCTGATTATTCGCTTCACAGCTCCAGCTTTGAGCAGTCAGATTCTTATCTACAGAGCGC
rJMFF024E01+          TTCTGATTATTCGCTTCACAGCTCCAGCTTTGAGCAGTCAGATTCTTATCTACAGAGCGC
                      ____________________________________________________________
consensus             TTCTGATTATTCGCTTCACAGCTCCAGCTTTGAGCAGTCAGATTCTTATCTACAGAGCGC
 
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rJMSF044M05+          TGTGAATAGCTTTTTAGGTCGCACAGCGGTCTCCCCAGACAAGGCACAGAGGAGATGGAA
rJMFF024E01+          TGTGAATAGCTTTTTAGGTCGCACAGCGGTCTCCCCAGACAAGGCACAGAGGAGATGGAA
                      ____________________________________________________________
consensus             TGTGAATAGCTTTTTAGGTCGCACAGCGGTCTCCCCAGACAAGGCACAGAGGAGATGGAA
 
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rJMSF044M05+          AATGTTGTTCAGTGTATTGAGGTGGTTCTCTGTTAGGAGAATTGTTGCTAGAAAGGGTGG
rJMFF024E01+          AATGTTGTTCAGTGTATTGAGGTGGTTCTCTGTTAGGAGAATTGTTGCTAGAAAGGGTGG
                      ____________________________________________________________
consensus             AATGTTGTTCAGTGTATTGAGGTGGTTCTCTGTTAGGAGAATTGTTGCTAGAAAGGGTGG
 
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rJMSF044M05+          TGTAGGTGTTAATCGAAAAGACAAGGCTCCTCCATATTACTAAGTAGCTAGTAGTACACA
rJMFF024E01+          TGTAGGTGTTAATCGAAAAGACAAGGCTCCTCCATATTACTAAGTAGCTAGTAGTACACA
                      ____________________________________________________________
consensus             TGTAGGTGTTAATCGAAAAGACAAGGCTCCTCCATATTACTAAGTAGCTAGTAGTACACA
 
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rJMSF044M05+          TATATATATATATGGTATTTAATGCTGCGGGCAATTAATCAACAAAAGTACTGGGTTCAA
rJMFF024E01+          TATATATATATATGGTATTTAATGCTGCGGGCAATTAATCAACAAAAGTACTGGGTTCAA
                      ____________________________________________________________
consensus             TATATATATATATGGTATTTAATGCTGCGGGCAATTAATCAACAAAAGTACTGGGTTCAA
 
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rJMSF044M05+          CTGCAGAATTGAAGACGCTTATTTATGATGCATGCATGCAGTCTCTTCAATCATCAGAAA
rJMFF024E01+          CTGCAGAATTGAAGACGCTTATTTATGATGCATGCATGCAGTCTCTTCAATCATCAGAAA
                      ____________________________________________________________
consensus             CTGCAGAATTGAAGACGCTTATTTATGATGCATGCATGCAGTCTCTTCAATCATCAGAAA
 
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rJMSF044M05+          ATTCATCTCATCAATATATATAGATATATAGTTGTGAAAATTAAAGCTCTGATTAGCTTA
rJMFF024E01+          ATTCATCTCATCAATATATATAGATATATAGTTGTGAAAATTAAAGCTCTGATTAGCTTA
                      ____________________________________________________________
consensus             ATTCATCTCATCAATATATATAGATATATAGTTGTGAAAATTAAAGCTCTGATTAGCTTA
 
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rJMSF044M05+          TGAAGATTCATATATGTGGCAGGTGTTGTGGAAGGATGATACCTAGCTAGCTAGCTTGTA
rJMFF024E01+          TGAAGATTCATATATGTGGCAGGTGTTGTGGAAGGATGATACCTAGCTAGCTAGCTTGTA
                      ____________________________________________________________
consensus             TGAAGATTCATATATGTGGCAGGTGTTGTGGAAGGATGATACCTAGCTAGCTAGCTTGTA
 
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rJMSF044M05+          CTCATCAGTTCTCCCTTTCTTTTCTTGGAATTGTTTTATTGTTGTGGA            
rJMFF024E01+          CTCATCAGTTCT-CCTTTCTTTTCTTGGAATTGTTTTATTGTTGTGGACTGTCGATTTAC
                      ____________________________________________________________
consensus             CTCATCAGTTCTCCCTTTCTTTTCTTGGAATTGTTTTATTGTTGTGGACTGTCGATTTAC
 
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rJMFF024E01+          TGTACTGTAGTCTGTAGTGGAGAATATCATCTTTGTGCGATATCTCCGATCCATTTCCAT
                      ____________________________________________________________
consensus             TGTACTGTAGTCTGTAGTGGAGAATATCATCTTTGTGCGATATCTCCGATCCATTTCCAT