Contig 002593:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF024C18Sequence712002593 (2)emb|CDO99659.1|9e-63unnamed protein product [Coffea canephora]
JMSF003M13Sequence152020962721002593 (2)gb|AID16052.1|4e-49putative universal stress protein, partial [Catharanthus roseus]

Alignment

This contig is upended


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rJMSF003M13+                                  CGCCATCGATCTCTCCATCGACACCGAGGCCGCNTC
                      ____________________________________________________________
consensus                                     CGCCATCGATCTCTCCATCGACACCGAGGCCGCNTC
 
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rJMSF003M13+          CGCCGGCGACGAGGAAGCTCAACAGAAGGTCGAGGACGACTTCGACAATTTCACCACTAC
rJMFF024C18+                                         GAGGACGACTTCGACAATTTCACCACTAC
                      ____________________________________________________________
consensus             CGCCGGCGACGAGGAAGCTCAACAGAAGGTCGAGGACGACTTCGACAATTTCACCACTAC
 
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rJMSF003M13+          TAAGGCCAACGATGTGGCGCAGCCGCTGGTGGATGCGAATATTCCGTTCAAGATCCATAT
rJMFF024C18+          TAAGGCCAACGATGTGGCGCAGCCGCTGGTGGATGCGAATATTCCGTTCAAGATCCATAT
                      ____________________________________________________________
consensus             TAAGGCCAACGATGTGGCGCAGCCGCTGGTGGATGCGAATATTCCGTTCAAGATCCATAT
 
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rJMSF003M13+          TGTGAAGGACCACGACATGAAGGAGAGGCTGTGCTTGGAAGTNGAGAGGCTGGGGTTGAG
rJMFF024C18+          TGTGAAGGACCACGACATGAAGGAGAGGCTGTGCTTGGAAGTGGAGAGGCTGGGGTTGAG
                      ____________________________________________________________
consensus             TGTGAAGGACCACGACATGAAGGAGAGGCTGTGCTTGGAAGTGGAGAGGCTGGGGTTGAG
 
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rJMSF003M13+          CACCATGATCATGGGAAGCCGAGGATTCGGCGCNTCTAGGCGCAACACCAAAGGCCGGCT
rJMFF024C18+          CACCATGATCATGGGAAGCCGAGGATTCGGCGCTTCTAGGCGCAACACCAAAGGCCGGCT
                      ____________________________________________________________
consensus             CACCATGATCATGGGAAGCCGAGGATTCGGCGCTTCTAGGCGCAACACCAAAGGCCGGCT
 
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rJMSF003M13+          GGGGAGCGTTAGCGATTACTGCGTCCACCACTGCGTTCNGCCCTGTTGTGGTGGTGAGAT
rJMFF024C18+          GGGGAGCGTTAGCGATTACTGCGTCCACCACTGCGTT-TGCCCTGTTGTGGTGGTGATAT
                      ____________________________________________________________
consensus             GGGGAGCGTTAGCGATTACTGCGTCCACCACTGCGTTCTGCCCTGTTGTGGTGGTGATAT
 
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rJMSF003M13+          ATCCCGNTGAGAAAGATGNCCGTGCAGCCTCCGGNGGCGGTTCAGCCAAAGCTGCGGCCA
rJMFF024C18+          ATCCCGATGAGAAAGATGGCCGTGCAGCCTCCGGCGGCGGTTCAGCCAAAGCTGCGGCCA
                      ____________________________________________________________
consensus             ATCCCGATGAGAAAGATGGCCGTGCAGCCTCCGGCGGCGGTTCAGCCAAAGCTGCGGCCA
 
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rJMSF003M13+          AGGACACTTTAGGGCTTCACCCTGTCCCAGAGGAAGAGCCCATATATCATGATGCNTCCG
rJMFF024C18+          AGGACACTTTAGGGCTTCACCCTGTCCCAGAGGAAGAGCCCATATATCATGATGCCTCCG
                      ____________________________________________________________
consensus             AGGACACTTTAGGGCTTCACCCTGTCCCAGAGGAAGAGCCCATATATCATGATGCCTCCG
 
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rJMSF003M13+          ACAAGGCTACAGATGCGTAGANGGCTTCTTCAGCAAATAGATNCTAAAGATGAGATGTTT
rJMFF024C18+          ACAAGGCTACAGATGCGTAGATGGCTTCTTCAGCAAATAGATGCTAAAGATGAGATGTTT
                      ____________________________________________________________
consensus             ACAAGGCTACAGATGCGTAGATGGCTTCTTCAGCAAATAGATGCTAAAGATGAGATGTTT
 
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rJMSF003M13+          GGAAACATATGAAATGATGTCAGCTGGTTGNGGACCTANGCCTCATCAAAGAAACGGATT
rJMFF024C18+          GGAAACATATGAAATGATGTCAGCTGGTTGTGGACCTATGCCTCATCAAAGAAACGGATT
                      ____________________________________________________________
consensus             GGAAACATATGAAATGATGTCAGCTGGTTGTGGACCTATGCCTCATCAAAGAAACGGATT
 
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rJMSF003M13+          TGGTGGTGTTGAGAGCTTTTGNTGTGCTANCTTNTGGTTTGTACNCATNGTTTCAGGTCC
rJMFF024C18+          TGGTGGTGTTGAGAGCTTTTGTTGTGCTAGCTTCTGGTTTGTACGCATTGTTTCAGGTCC
                      ____________________________________________________________
consensus             TGGTGGTGTTGAGAGCTTTTGTTGTGCTAGCTTCTGGTTTGTACGCATTGTTTCAGGTCC
 
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rJMSF003M13+          NTAAAATCTGGANNGATTGGTAAAGTCAGANTGAGCATCTTNGCTCTGGTTTAGGTCTTT
rJMFF024C18+          ATAAAATCTGGATTGATTGGTAAAGTC-GATTGAGCATCTTTGCTCTGGTTTAGGTCTTT
                      ____________________________________________________________
consensus             ATAAAATCTGGATTGATTGGTAAAGTCAGATTGAGCATCTTTGCTCTGGTTTAGGTCTTT
 
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rJMSF003M13+          AAA                                                         
rJMFF024C18+          AAACAGGCTCCGCTGCTTTTCATGTACGGTACCCTTCAAGTTTGGTCATTCAACACGATA
                      ____________________________________________________________
consensus             AAACAGGCTCCGCTGCTTTTCATGTACGGTACCCTTCAAGTTTGGTCATTCAACACGATA