Contig 002592:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF004M12Sequence578000618 (6)ref|XP_009615972.1|217PREDICTED: uncharacterized protein LOC104108601 [Nicotiana tomentosiformis]497002592 (8)gb|KJB62679.1|5e-30hypothetical protein B456_009G429700 [Gossypium raimondii]
JMFF014O12Sequence481000618 (6)ref|XP_009615972.1|167PREDICTED: uncharacterized protein LOC104108601 [Nicotiana tomentosiformis]830002592 (8)emb|CDP14941.1|1e-92unnamed protein product [Coffea canephora]
JMFF024B08Sequence411000618 (6)ref|XP_009615972.1|99.4PREDICTED: uncharacterized protein LOC104108601 [Nicotiana tomentosiformis]680002592 (8)emb|CDP14941.1|1e-64unnamed protein product [Coffea canephora]
JMSF008C21Sequence344000618 (6)ref|XP_009615972.1|99.0PREDICTED: uncharacterized protein LOC104108601 [Nicotiana tomentosiformis]802002592 (8)emb|CDP14941.1|8e-102unnamed protein product [Coffea canephora]
JMSF009C12Sequence328000618 (6)ref|XP_009615972.1|103PREDICTED: uncharacterized protein LOC104108601 [Nicotiana tomentosiformis]783002592 (8)emb|CDP14941.1|6e-88unnamed protein product [Coffea canephora]
JMSF045E04Sequence788000618 (6)ref|XP_009615972.1|303PREDICTED: uncharacterized protein LOC104108601 [Nicotiana tomentosiformis]759002592 (8)emb|CDP14941.1|5e-88unnamed protein product [Coffea canephora]
JMSF050P21Sequence153002592 (8)105002592 (8)

Alignment

This contig is upended


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rJMSF008C21+                                              ACGACCGGACGTACTGGCTGGACC
rJMFF014O12+                                         GTCAAACGACGGGACGTACTGGCTGGACC
                      ____________________________________________________________
consensus                                            GTCAAACGACGGGACGTACTGGCTGGACC
 
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rJMSF045E04+                                 GGAGACGGTGAAGAAAGGAGA-TTGAAGAGTACNGAG
rJMSF008C21+          TGCCGGTGGATGAAACGGCGAA-GGAGACGGTGAAGAAAGGAGATTTGAAGAGTACGGAG
rJMFF014O12+          TGCCGGTGGATGAAACGGCGAAGGGAGACGGTGAAGAAAGGAGATTTGAAGAGTACGGAG
rJMSF009C12+                                                       TTGAAGAGTACGGAG
                      ____________________________________________________________
consensus             TGCCGGTGGATGAAACGGCGAAGGGAGACGGTGAAGAAAGGAGATTTGAAGAGTACGGAG
 
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rJMSF045E04+          GTTTATCTCCACGTGAAACCCATGCTGGGTGGAACGTTCACCGACATAGTGGTTTGGTTG
rJMSF008C21+          GTTTATCTCCACGTGAAACCCATGCTGGGTGGAACGTTCACCGACATAGTGGTTTGGTTG
rJMFF014O12+          GTTTATCTCCACGTGAAACCCATGCTGGGTGGAACGTTCACCGACATAGTGGTTTGGTTG
rJMSF009C12+          GTTTATCTCCACGTGAAACCCATGCTGGGTGGAACGTTCACCGACATAGTGGTTTGGTTG
                      ____________________________________________________________
consensus             GTTTATCTCCACGTGAAACCCATGCTGGGTGGAACGTTCACCGACATAGTGGTTTGGTTG
 
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rJMSF045E04+          TTTTATCCGTTCAACGGTCCGGCGACGGCGAAGCTTGGGATACTCAACATACCGCTAGGC
rJMSF008C21+          TTTTATCCGTTCAACGGTCCGGCGACGGCGAAGCTTGGGATACTCAACATACCGCTAGGC
rJMFF014O12+          TTTTATCCGTTCAACGGTCCGGCGACGGCGAAGCTTGGGATACTCAACATACCGCTAGGC
rJMSF009C12+          TTTTATCCGTTCAACGGTCCGGCGACGGCGAAGCTTGGGATACTCAACATACCGCTAGGC
rJMFF024B08+                                                 ATACTCAACATACCGCTAGGC
                      ____________________________________________________________
consensus             TTTTATCCGTTCAACGGTCCGGCGACGGCGAAGCTTGGGATACTCAACATACCGCTAGGC
 
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rJMSF045E04+          CGCACCGGGGAACACATCGGCGACTGGGAGCATCTGACTCTAAGAATCAGCAACTTCACC
rJMSF008C21+          CGCACCGGGGAACACATCGGCGACTGGGAGCATCTGACTCTAAGAATCAGCAACTTCACC
rJMFF014O12+          CGCACCGGGGAACACATCGGCGACTGGGAGCATCTGACTCTAAGAATCAGCAACTTCACC
rJMSF009C12+          CGCACCGGGGAACACATCGGCGACTGGGAGCATCTGACTCTAAGAATCAGCAACTTCACC
rJMFF024B08+          CGCACCGGGGAACACATCGGCGACTGGGAGCATCTGACTCTAAGAATCAGCAACTTCACC
                      ____________________________________________________________
consensus             CGCACCGGGGAACACATCGGCGACTGGGAGCATCTGACTCTAAGAATCAGCAACTTCACC
 
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rJMSF045E04+          GGAGTTCTGTACAGAATGTACTTCTCTGCCCACAGTAGCGGCGCGTGGGTGGACACCCGG
rJMFF004M12+                            TACTTCTCTGCCCACAGTAGCGGCGCGTGGGTNGACACCCNG
rJMSF008C21+          GGAGTTCTGTACAGAATGTACTTCTCTGCCCACAGTAGCGGCGCGTGGGTGGACACCCGG
rJMFF014O12+          GGAGTTCTGTACAGAATGTACTTCTCTGCCCACAGTAGCGGCGCGTGGGTGGACACCCGG
rJMSF009C12+          GGAGTTCTGTACAGAATGTACTTCTCTGCCCACAGTAGCGGCGCGTGGGTGGACACCCGG
rJMFF024B08+          GGAGTTCTGTACAGAATGTACTTCTCTGCCCACAGTAGCGGCGCGTGGGTGGACACCCGG
                      ____________________________________________________________
consensus             GGAGTTCTGTACAGAATGTACTTCTCTGCCCACAGTAGCGGCGCGTGGGTGGACACCCGG
 
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rJMSF045E04+          GACCTGGAGTTCAGCGACGGCGGCAACAAGCCGGTGGCGTACGCGTCGCGGAACGGGCAC
rJMFF004M12+          GACCTGGAGTTCAGCNACGGCGGCAACAAGCCGNTGGCGTACGCGTCGCGGAACGGGCAC
rJMSF008C21+          GACCTGGAGTTCAGCGACGGCGGCAACAAGCCGGTGGCGTACGCGTCGCGGAACGGGCAC
rJMFF014O12+          GACCTGGAGTTCAGCGACGGCGGCAACAAGCCGGTGGCGTACGCGTCGCGGAACGGGCAC
rJMSF009C12+          GACCTGGAGTTCAGCGACGGCGGCAACAAGCCGGTGGCGTACGCGTCGCGGAACGGGCAC
rJMFF024B08+          GACCTGGAGTTCAGCGACGGCGGCAACAAGCCGGTAGCGTACGCGTCGCGGAACGGGCAC
                      ____________________________________________________________
consensus             GACCTGGAGTTCAGCGACGGCGGCAACAAGCCGGTGGCGTACGCGTCGCGGAACGGGCAC
 
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rJMSF045E04+          GCGAATTATTCGGCGCCGGGGGTGGTTTTGCAAGGGCCCAACGACGAGATCGGGATAAGG
rJMFF004M12+          GCGAATTATTCGGCNCCGGGGGTGGTTTTGCAAGGGCCCANNGNCGAGATCGGNATAAGG
rJMSF008C21+          GCGAATTATTCGGCGCCGGGGGTGGTTTTGCAAGGGCCCAACGACGAGATCGGGATAAGG
rJMFF014O12+          GCGAATTATTCGGCGCCGGGGGTGGTTTTGCAAGGGCCCAACGACGAGATCGGGATAAGG
rJMSF009C12+          GCGAATTATTCGGCGCCGGGGGTGGTTTTGCAAGGGCCCAACGACGAGATCGGGATAAGG
rJMFF024B08+          GCGAATTATTCGGCGCCGGGGGTGGTTTTGCAAGGGCCCAACGACGAGATCGGGATAAGG
                      ____________________________________________________________
consensus             GCGAATTATTCGGCGCCGGGGGTGGTTTTGCAAGGGCCCAACGACGAGATCGGGATAAGG
 
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rJMSF045E04+          AACGACACTGCGAAGAGTAACTTGGTTTTGGAGTGTGGGGCGAAGTATTCGGTGGTGGCG
rJMFF004M12+          AANGACACTGCGAAGAGTAACTTGGTTTTGGAGTGTGGGGCGAAGTATTCGNTGGTGNCG
rJMSF008C21+          AACGACACTGCGAAGAGTAACTTGGTTTTGGAGTGTGGGGCGAAGTATTCGGTGGTGGCG
rJMFF014O12+          AACGACACTGCGAAGAGTAACTTGGTTTTGGAGTGTGGGGCGAAGTATTCGGTGGTGGCG
rJMSF009C12+          AACGACACTGCGAAGAGTAACTTGGTTTTGGAGTGTGGGGCGAAGTATTCGGTGGTGGCG
rJMFF024B08+          AACGACACTGCGAAGAGTAACTTGGTTTTGGAGTGTGGGGCGAAGTATTCGGTGGTGGCG
                      ____________________________________________________________
consensus             AACGACACTGCGAAGAGTAACTTGGTTTTGGAGTGTGGGGCGAAGTATTCGGTGGTGGCG
 
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rJMSF045E04+          GCGCCGGAGAGTGTGGTTGAGCCGGCGTGGCTGAACTATAGAAGGAAGTGGGGGCCGCAC
rJMFF004M12+          GCGCCGGAGAGTGTGGTTGAGCCGGCGTGGNTGAACTATAGAAGGAANTGGGGGCCGCAC
rJMSF008C21+          GCGCCGGAGAGTGTGGTTGAGCCGGCGTGGCTGAACTATAGAAGGAAGTGGGGGCCGCAC
rJMFF014O12+          GCGCCGGAGAGTGTGGTTGAGCCGGCGTGGCTGAACTATAGAAGGAAGTGGGGGCCGCAC
rJMSF009C12+          GCGCCGGAGAGTGTGGTTGAGCCGGCGTGGCTGAACTATAGAAGGAAGTGGGGGCCGCAC
rJMFF024B08+          GCGCCGGAGAGTGTGGTTGAGCCGGCGTGGCTGAACTATAGAAGGAAGTGGGGGCCGCAC
                      ____________________________________________________________
consensus             GCGCCGGAGAGTGTGGTTGAGCCGGCGTGGCTGAACTATAGAAGGAAGTGGGGGCCGCAC
 
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rJMSF045E04+          ATTACGTATGAGCTTAAAGAGGAAGTGGAGAAGGTGGAGGGGATATTGACG-GGGGGCGT
rJMFF004M12+          ATTACGTATGANCTTAAAGAGGAAGTGGAGAAGGTGGAGGGGATATTGACGNGGGGGCGT
rJMSF008C21+          ATTACGTATGAGCTTAAAGAGGAAGTGGAGAAGGTGGAGGGGATATTGACG-GGGGGCGT
rJMFF014O12+          ATTACGTATGAGCTTAAAGAGGAAGTGGAGAAGGTGGAGGGGATATTGACG-GGGGGCGT
rJMSF009C12+          ATTACGTATGAGCTTAAAGAGGAAGTGGAGAAGGTGGAGGGGATATTGACG-GGGGGCGT
rJMFF024B08+          ATTACGTATGAGCTTAAAGAGGAAGTGGAGAAGGTGGAGGGGATATTGACG-GGGGGCGT
                      ____________________________________________________________
consensus             ATTACGTATGAGCTTAAAGAGGAAGTGGAGAAGGTGGAGGGGATATTGACG-GGGGGCGT
 
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rJMSF045E04+          GAAAGATCTGTTTCAGAGTCTGGTGAATATACTGCCCAATGAATTGTTTGAAGAAGACGG
rJMFF004M12+          GAAAGATCTGTTTCAGAGTCTGGTNAATATACTGCCCAATGAATTGTTNNAAGAAGACNC
rJMSF008C21+          GAAAGATCTGTTTCAGAGTCTGGTGAATATACTGCCCAATGAATTGTTTGAAGAAGACGG
rJMFF014O12+          GAAAGATCTGTTTCAGAGTCTGGTGAATATACTGCCCAATGAATTGTTTGAAGAAGACGG
rJMSF009C12+          GAAAGATCTGTTTCAGAGTCTGGTGAATATACTGCCCAATGAATTGTTTGAAGAAGACGG
rJMFF024B08+          GAAAGATCTGTTTCAGAGTCTGGTGAATATACTGCCCAATGAATTGTTTGAAGAAGACGG
                      ____________________________________________________________
consensus             GAAAGATCTGTTTCAGAGTCTGGTGAATATACTGCCCAATGAATTGTTTGAAGAAGACGG
 
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rJMSF045E04+          CCCGACTGGCCCCAAGGAGAAGAATTTCTGGGCCGGTGATGAGAGGTAGGTAGCTGCCGT
rJMFF004M12+          CCCGNCTGGCCCCANGGAGAAGAATTTCTGGNCCGGTGATGAGAGNTAGGTAGCTNCCGT
rJMSF008C21+          CCCGACTGGCCCCAAGGAGAAGAATTTCTGGGCCGGTGATGAGAGGTAGGTAGCTGCCGT
rJMFF014O12+          CCCGACTGGCCCCAAGGAGAAGAATTTCTGGGCCGGTGATGAGAGGTAGGTAGCTGCCGT
rJMSF009C12+          CCCGACTGGCCCCAAGGAGAAGAATTTCTGGGCCGGTGATGAGAGGTAGGTAGCTGCCGT
JMSF050P21-                             GAAGAATTTCTGGGCCGGTGATGAGAGGTAGGTAGCTGCCGT
rJMSF050P21+                            GAAGAATTTCTGGGCCGGTGATGAGAGGTAGGTAGCTGCCGT
rJMFF024B08+          CCCGACTGGCCCCAAGGAGAAGAATTTCTGGGCCGGTGATGAGAGGTAGGTAGCTGCCGT
                      ____________________________________________________________
consensus             CCCGACTGGCCCCAAGGAGAAGAATTTCTGGGCCGGTGATGAGAGGTAGGTAGCTGCCGT
 
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rJMSF045E04+          GAAATTAATGCGATTGGATTAATGGGTGTGAGTGATGAGTGAATTGAAT           
rJMFF004M12+          GAAATTAATNCGATTGGATTAATGGGTGTGAGTGA                         
rJMSF008C21+          GAAATTAATGCGATTGGATTAATGGGTGTGAGTGATGAGTGAATTGAAT           
rJMFF014O12+          GAAATTAATGCGATTGGATTAATGGGTGTGAGTGATGAGTGAATTGAATGTCTTCAAATG
rJMSF009C12+          GAAATTAATGCGATTGGATTAATGGGTGTGAGTGATGAGTGAATTGAATGTCTTCAAATG
JMSF050P21-           GAAATTAATGCGATTGGATTAATGGGTGTGAGTGATGAGTGAATTGAATGTCTTCAAATG
rJMSF050P21+          GAAATTAATGCGATTGGATTAATGGGTGTGAGTGATGAGTGAATTGAATGTCTTCAAATG
rJMFF024B08+          GAAATTAATGCGATTGGATTAATGGGTGTGAGTGATGAGTGAATTGAATGTCTTCAAATG
                      ____________________________________________________________
consensus             GAAATTAATGCGATTGGATTAATGGGTGTGAGTGATGAGTGAATTGAATGTCTTCAAATG
 
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rJMFF014O12+          CTGTCATGTCTGCAATATAATA                                      
rJMSF009C12+          CTGTCATGTCTGCAATATAATAGTTTTACTGC                            
JMSF050P21-           CTGTCATGTCTGCAATATAATAGTTTTACTGC                            
rJMSF050P21+          C                                                           
rJMFF024B08+          CTGTCATGTCTGCAATATAATAGTTTTACTGCTGTATGTATGTGTCTGTGTGTATCATAT
                      ____________________________________________________________
consensus             CTGTCATGTCTGCAATATAATAGTTTTACTGCTGTATGTATGTGTCTGTGTGTATCATAT