clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF014D14 | Sequence | 581 | 008789 (3) | ref|XP_009601634.1| | 2e-88 | PREDICTED: 3-ketoacyl-CoA synthase 19-like [Nicotiana tomentosiformis] | 599 | 002591 (5) | ref|XP_004234025.1| | 3e-57 | PREDICTED: 3-ketoacyl-CoA synthase 11-like [Solanum lycopersicum] |
JMFF024A01 | Sequence | 351 | 008789 (3) | ref|XP_009601634.1| | 7e-26 | PREDICTED: 3-ketoacyl-CoA synthase 19-like [Nicotiana tomentosiformis] | 596 | 002591 (5) | ref|XP_004234025.1| | 3e-53 | PREDICTED: 3-ketoacyl-CoA synthase 11-like [Solanum lycopersicum] |
JMFN008B21 | Sequence | 631 | 002591 (5) | ref|XP_004234025.1| | 2e-103 | PREDICTED: 3-ketoacyl-CoA synthase 11-like [Solanum lycopersicum] | |||||
JMFS079H06 | Sequence | 626 | 002591 (5) | gb|KHN05051.1| | 6e-135 | 3-ketoacyl-CoA synthase 11 [Glycine soja] | |||||
JMSF037L02 | Sequence | 570 | 002591 (5) | ref|XP_004234025.1| | 3e-120 | PREDICTED: 3-ketoacyl-CoA synthase 11-like [Solanum lycopersicum] | 633 | 005822 (7) | gb|AAR87848.1| | 3e-72 | coronatine-insensitive 1 [Nicotiana tabacum] |
This contig is upended
. : . : . : . : . : . :
JMFS079H06- GCAGTCTCTTTAACCCGACCCCTTCTCTTTCCGCCATGATTGTTAACCATTACAA
____________________________________________________________
consensus GCAGTCTCTTTAACCCGACCCCTTCTCTTTCCGCCATGATTGTTAACCATTACAA
. : . : . : . : . : . :
JMFS079H06- GCTTAGGGGGAACATTCAAAGCTATAACCTTGGTGGCATGGGGTGCAGTGCTGGGCTCAT
____________________________________________________________
consensus GCTTAGGGGGAACATTCAAAGCTATAACCTTGGTGGCATGGGGTGCAGTGCTGGGCTCAT
. : . : . : . : . : . :
JMFS079H06- TTCAATTGACCTTGCCAAACAACTCTTGCAGGTGCAACCAAACTCCTATGCCCTAGTAGT
____________________________________________________________
consensus TTCAATTGACCTTGCCAAACAACTCTTGCAGGTGCAACCAAACTCCTATGCCCTAGTAGT
. : . : . : . : . : . :
JMFS079H06- GAGCATGGAAAACATAACACTCAACTGGTACTTCGGCAACAACCGATCAATGCTGGTGTC
____________________________________________________________
consensus GAGCATGGAAAACATAACACTCAACTGGTACTTCGGCAACAACCGATCAATGCTGGTGTC
. : . : . : . : . : . :
JMFS079H06- CAACTGCATCTTCCGAATGGGCGGCGCCGCCATCCTCCTCTCCAACCGCTCCTCCGACCG
JMSF037L02+ TCCGAATGGGCGGCGCCGCCATCCTCCTCTCCAACCGCTCTTCCGACCG
____________________________________________________________
consensus CAACTGCATCTTCCGAATGGGCGGCGCCGCCATCCTCCTCTCCAACCGCTCTTCCGACCG
. : . : . : . : . : . :
JMFS079H06- CCGCCGCTCAAAGTACCAGCTCATCCACACCGTCCGCACCCACAAGGGCGCCGACGACCG
JMSF037L02+ CCGCCGCTCAAAGTACCAGCTCATCCACACCGTCCGCACCCACAAGGGCGCCGACGACCG
____________________________________________________________
consensus CCGCCGCTCAAAGTACCAGCTCATCCACACCGTCCGCACCCACAAGGGCGCCGACGACCG
. : . : . : . : . : . :
JMFS079H06- GAGCTACTCCTGCGTCTTCCAAGAAGAGGACGAAAAACGCGAGATCGGCGTCGCCCTCTC
JMSF037L02+ GAGCTACTCNTGCGTCTTCCAAGAAGAGGACGAAAAACGCGAGATCGGCGTCGCCCTCTC
____________________________________________________________
consensus GAGCTACTCCTGCGTCTTCCAAGAAGAGGACGAAAAACGCGAGATCGGCGTCGCCCTCTC
. : . : . : . : . : . :
JMFS079H06- CAAAGACCTCATGGCCGTCGCCGGCGAGGCCTTAAAGACAAACATCACCACCCTCGGACC
JMSF037L02+ CAAAGACCTCATGGCCGTCGCCGGCGAGGCCTTAAAGACAAACATCACCACCCTCGGACC
JMFN008B21- AACATCACCACCCTCGGACC
____________________________________________________________
consensus CAAAGACCTCATGGCCGTCGCCGGCGAGGCCTTAAAGACAAACATCACCACCCTCGGACC
. : . : . : . : . : . :
JMFS079H06- CCTCGTCCTCCCCATGTCCGAACAGCTCCTCTTCTTCGCCACCCTCGTCGCCCGGAAAGT
JMSF037L02+ CCTCGTCCTCCCCATGTCCGAACAGCTCCTCTTCTTCGCCACCCTCGTCGCCCGGAAAGT
JMFN008B21- CCTCGTCCTCCCCATGTCCGAACAGCTCCTCTTCTTCGCCACCCTCGTCGCCCGGAAAGT
rJMFF014D14+ GTCGCCCGGAAAGT
____________________________________________________________
consensus CCTCGTCCTCCCCATGTCCGAACAGCTCCTCTTCTTCGCCACCCTCGTCGCCCGGAAAGT
. : . : . : . : . : . :
JMFS079H06- CTTCAAGATGAAGATCAAGCCCTACATCCCAGACTTCAAGCTGGCGTTCGAGCATTTCTG
JMSF037L02+ CTTCAAGATGAAGATCAAGCCCTACATCCCAGACTTCAAGCTGGCGTTCGAGCATTTCTG
JMFN008B21- CTTCAAGATGAAGATCAAGCCCTACATCCCAGACTTCAAGCTGGCGTTCGAGCATTTCTG
rJMFF014D14+ TTTCAAGATGAAGATCAAGCCCTACATCCCAGACTTCAAGNTGGNGTTNGAGCATTTTTG
____________________________________________________________
consensus CTTCAAGATGAAGATCAAGCCCTACATCCCAGACTTCAAGCTGGCGTTCGAGCATTTCTG
. : . : . : . : . : . :
JMFS079H06- CATCCACGCCGGCGGGCGAGCGGTGCTGGAC
JMSF037L02+ CATCCACGCCGGCGGGCGAGCGGTGCTGGACGAGTTAGAGAAGAATCTTGAACTCAGTCA
JMFN008B21- CATCCACGCCGGCGGGCGAGCGGTGCTGGACGAGTTAGAGAAGAATCTTGAACTCAGTCA
rJMFF014D14+ CATCCNCNCCGGCGGGCGANCGGTGCTGGACGAGTTAGAGAAGAATTTTGAACTCAGTCA
rJMFF024A01+ CCGGCGGGCGAGCGGTGCTGGACGAGTTAGAGAAGAATCTTGAACTCAGTCA
____________________________________________________________
consensus CATCCACGCCGGCGGGCGAGCGGTGCTGGACGAGTTAGAGAAGAATCTTGAACTCAGTCA
. : . : . : . : . : . :
JMSF037L02+ ATGGCACATGGAGCCTTCCAGAATGACGCTTTACCGATTCGGAAACACCTCCAGCAGTTC
JMFN008B21- ATGGCACATGGAGCCTTCCAGAATGACGCTTTACCGATTCGGAAACACCTCCAGCAGTTC
rJMFF014D14+ ATGGCNCATGGAGCCTTCCAGAANGACGCTTTNCCGATTNGGAAACNCCTCCAGCAGTTN
rJMFF024A01+ ATGGCACATGGAGCCTTCCAGAATGACGCTTTNCCGATTNGGAAACNCCTCCAGCAGTTN
____________________________________________________________
consensus ATGGCACATGGAGCCTTCCAGAATGACGCTTTACCGATTCGGAAACACCTCCAGCAGTTC
. : . : . : . : . : . :
JMSF037L02+ TTTGTGGTACGAATTGGCTTATTCCGAGGCTAAGGGGAGGATCAGAAAGGGAGATCGGAC
JMFN008B21- TTTGTGGTACGAATTGGCTTATTCCGAGGCTAAGGGGAGGATCAGAAAGGGAGATCGGAC
rJMFF014D14+ TTTGTGGTACGAATTGGNTTATTCCGAGGNTAAGGGGAGGATCAGAAAGGGAGATNGGAC
rJMFF024A01+ TTTGTGGTNCGAATTGGNTTATTCCGAGGNTAAGGGGAGGATCAGAAAGGGAGATNGGAC
____________________________________________________________
consensus TTTGTGGTACGAATTGGCTTATTCCGAGGCTAAGGGGAGGATCAGAAAGGGAGATCGGAC
. : . : . : . : . : . :
JMSF037L02+ TTGGCAGATAGCGTTTGGGTCTGGGTTTAAA
JMFN008B21- TTGGCAGATAGCGTTTGGGTCTGGGTTTAAATGTAACAGTGCGGTTTGGCGTGCCTTGAA
rJMFF014D14+ TTGGCAGATAGCGTTTGGGTTTGGGTTTAAANGTAACAGTGCGGTTTGGCGTGCCTTGAA
rJMFF024A01+ TTGGCAGGTAGNGTTTGGGTTTGGGTTTAAATGTAACAGTGCGGTTTGGNGTGCCTTGAA
____________________________________________________________
consensus TTGGCAGATAGCGTTTGGGTCTGGGTTTAAATGTAACAGTGCGGTTTGGCGTGCCTTGAA
. : . : . : . : . : . :
JMFN008B21- GACCATCGATCCTGCCAAGCTCAAGAACCCATGGATGGACGAGATTCACGATTTCCCAGT
rJMFF014D14+ GACCATNGATCCTGCCAAGCTCAAGAACCCATGGATGGNCGAGATTCACGATTTCCCAGT
rJMFF024A01+ GACCATNGATCCTGCCAAGCTCAAGAACCCATGGATGGNCGAGATTCACGATTTCCCAGT
____________________________________________________________
consensus GACCATCGATCCTGCCAAGCTCAAGAACCCATGGATGGACGAGATTCACGATTTCCCAGT
. : . : . : . : . : . :
JMFN008B21- TGAGGTTCCTAGAGTTGCCTCCATCAACGCTTGATGATTCTTTAAAAAAAAAAACATTTA
rJMFF014D14+ TGAGGTTCCTAGAGTTGCCTCCATCAACGCTTGATGATTNTTTAAAAAAAAAAACATTTA
rJMFF024A01+ TGAGGTTCCTAGAGTTGCCTCCATCAACGCTTGATGATTNTTTAAAAAAAAAAACATTTA
____________________________________________________________
consensus TGAGGTTCCTAGAGTTGCCTCCATCAACGCTTGATGATTCTTTAAAAAAAAAAACATTTA
. : . : . : . : . : . :
JMFN008B21- TTAGAATACCCAAAAACATGTGTTTAAATTCTTGATTACTTCTTCCAATTCCAAGGTTGT
rJMFF014D14+ TTAGAATACCCAAAAACATGTGTTTAAATTCTTGATTACTTCTTCCGATTCCAAGGTTGT
rJMFF024A01+ TTAGAATACCCAAAAACATGTGTTTAAATTCTTGATTACTTCTTCCGATTCCGAGGTTGT
____________________________________________________________
consensus TTAGAATACCCAAAAACATGTGTTTAAATTCTTGATTACTTCTTCCGATTCCAAGGTTGT
. : . : . : . : . : . :
JMFN008B21- CTTTTCTTTTTCATTTTGTTATACTTGATGTAAAGGAGAAACTTTTGGTGATTGAAAACC
rJMFF014D14+ CTTTTCTTTTTCATTTTGTTATACTTGATGTAAAGGAGAAACTTTTGGTGATTGAAAACC
rJMFF024A01+ CTTTTCTTTTTCATTTTGTTATACTTGATGTAAAGGAGAAACTTTTGGTGATTGAAAACC
____________________________________________________________
consensus CTTTTCTTTTTCATTTTGTTATACTTGATGTAAAGGAGAAACTTTTGGTGATTGAAAACC
. : . : . : . : . : . :
JMFN008B21- ACGTTACAG
rJMFF014D14+ ACGTTACAGTGGAAGGCAATACTCCAAAAATATATCCGGCCATCA
rJMFF024A01+ ACGTTACAGTGGAAGGCAATACTCCAAAAATATATCCGGCCATCATTCTCTTGAGTCATC
____________________________________________________________
consensus ACGTTACAGTGGAAGGCAATACTCCAAAAATATATCCGGCCATCATTCTCTTGAGTCATC
. : . : . : . : . : . :
rJMFF024A01+ AATGGCGTTAGTAGTGTATGTAAGCATCCTCCAAATTCTTGTAATTATTACAAATAAATG
____________________________________________________________
consensus AATGGCGTTAGTAGTGTATGTAAGCATCCTCCAAATTCTTGTAATTATTACAAATAAATG