Contig 002587:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF022N14Sequence555007373 (2)ref|XP_009790185.1|109PREDICTED: uncharacterized protein LOC104237691 [Nicotiana sylvestris]592002587 (2)ref|XP_009790185.1|99.4PREDICTED: uncharacterized protein LOC104237691 [Nicotiana sylvestris]
JMSF024G06Sequence670007373 (2)ref|XP_009790185.1|147PREDICTED: uncharacterized protein LOC104237691 [Nicotiana sylvestris]737002587 (2)ref|XP_009790185.1|160PREDICTED: uncharacterized protein LOC104237691 [Nicotiana sylvestris]

Alignment

This contig is upended


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rJMSF024G06+                              ACCCGAATGGAGCTACTACCGTTGGTGATGAAGACCAAAT
                      ____________________________________________________________
consensus                                 ACCCGAATGGAGCTACTACCGTTGGTGATGAAGACCAAAT
 
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rJMSF024G06+          TCAGGCTCACTTCTTCAACNGCGAGGATAGTAATCAATCTTGGAGGGAGAAACAAGACAG
                      ____________________________________________________________
consensus             TCAGGCTCACTTCTTCAACNGCGAGGATAGTAATCAATCTTGGAGGGAGAAACAAGACAG
 
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rJMSF024G06+          ATATGAAATGACTGAATCCTATAGCATTCAACAATCANTTTTTACAGCAGATGACTCCAA
                      ____________________________________________________________
consensus             ATATGAAATGACTGAATCCTATAGCATTCAACAATCANTTTTTACAGCAGATGACTCCAA
 
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rJMSF024G06+          CCAGCCANTAGATGCCAATGAGAGCTCTGAGGGGATTAGGGAGGAGGAACACGCA-CGCA
rJMFF022N14+                  TAGATGCCAATGAGAGCTCTGAGGGGATTAGGGAGGAGGAACACGCACCGCA
                      ____________________________________________________________
consensus             CCAGCCANTAGATGCCAATGAGAGCTCTGAGGGGATTAGGGAGGAGGAACACGCACCGCA
 
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rJMSF024G06+          AGGTGACTGAAGCTCGNGAAAGGAGAGAGAAAGCTCTGAGATTCGTATCCCATTCAAGGA
rJMFF022N14+          AGGTGACTGAAGCTCGCGAAAGGAGAGAGAAAGCTCTGAGATTCGTATCCCATTCAAGGA
                      ____________________________________________________________
consensus             AGGTGACTGAAGCTCGCGAAAGGAGAGAGAAAGCTCTGAGATTCGTATCCCATTCAAGGA
 
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rJMSF024G06+          TGCGAGACCTGCAAAGAGTATGGGCGCCCAGGCAGCTTAAGGCACCAAAAGGAAAATCTG
rJMFF022N14+          TGCGAGACCTGCAAAGAGTATGGGCGCCCAGGCAGCTTAAGGCACCAAAAGGAAAATCTG
                      ____________________________________________________________
consensus             TGCGAGACCTGCAAAGAGTATGGGCGCCCAGGCAGCTTAAGGCACCAAAAGGAAAATCTG
 
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rJMSF024G06+          AACAGCAGGAGGACTCTAAAAGGAAAGAGAGACGAAAAGCTCATTACAGTGTGGTGTGTG
rJMFF022N14+          AACAGCAGGAGGACTNTAAAAGGAAAGAGAGACGAAAAGCTCATTACAGTGTGGTGTGTG
                      ____________________________________________________________
consensus             AACAGCAGGAGGACTCTAAAAGGAAAGAGAGACGAAAAGCTCATTACAGTGTGGTGTGTG
 
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rJMSF024G06+          AAACCCCAATGACAGAAAGAAAACGTGTGCGCTCTCGTGATGGGGACGAGGTGCACACAG
rJMFF022N14+          AAACCCCAATGACAGAAAGAAAACGTGTGCGCTCTCGTGATGGGGACGAGGTGCACACAG
                      ____________________________________________________________
consensus             AAACCCCAATGACAGAAAGAAAACGTGTGCGCTCTCGTGATGGGGACGAGGTGCACACAG
 
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rJMSF024G06+          ACTCCGGGAACTCTTCGCAATCTGTTTCCAAGGCACTGTTTCAGGATAGCTGATGATGAG
rJMFF022N14+          ACTCCGGGAACTCTTCGCAATCTGTTTCCAAGGCACTGTTTCAGGATAGCTGATGATGAG
                      ____________________________________________________________
consensus             ACTCCGGGAACTCTTCGCAATCTGTTTCCAAGGCACTGTTTCAGGATAGCTGATGATGAG
 
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rJMSF024G06+          CTTCAGAGCTGGCTTGGCTACTGCATTGTTTTTCATCAGCTGCCAATCCAAGAAAACAAG
rJMFF022N14+          CTTCAGAGCTGGCTTGGCTACTGCATTGTTTTTCATCAGCTGCCAATCCAAGAAAACAAG
                      ____________________________________________________________
consensus             CTTCAGAGCTGGCTTGGCTACTGCATTGTTTTTCATCAGCTGCCAATCCAAGAAAACAAG
 
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rJMSF024G06+          ATCTAAGATGACAGATAGATAGTGCTTTGCTTAGCTCATTGGTTCAGTAGGCAGTATTTG
rJMFF022N14+          ATCTAAGATGACAGATAGATAGTGCTTTGCTTAGCTCATTGGTTCAGTAGGCAGTATTTG
                      ____________________________________________________________
consensus             ATCTAAGATGACAGATAGATAGTGCTTTGCTTAGCTCATTGGTTCAGTAGGCAGTATTTG
 
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rJMSF024G06+          AGAAAAGATCTAAGATGATAGTGCTGATGCATCACTGTTAGTCCGAAGTGTAAATCCCAA
rJMFF022N14+          AGAAAAGATCTAAGATGATAGTGCTGATGCATCACTGTTAGTCCGAAGTGTAAATCCCAA
                      ____________________________________________________________
consensus             AGAAAAGATCTAAGATGATAGTGCTGATGCATCACTGTTAGTCCGAAGTGTAAATCCCAA
 
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rJMSF024G06+          ACATCACAGACTACCCTTCTTTTCTCTTCTGTAATTTA                      
rJMFF022N14+          ACATCACAGACTACCCTTCTTTTTTCTTCTGTAATTTATAATACAGATAACATTAAGAAA
                      ____________________________________________________________
consensus             ACATCACAGACTACCCTTCTTTTTTCTTCTGTAATTTATAATACAGATAACATTAAGAAA