Contig 002578:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF021E06Sequence447002578 (2)gb|EYU31998.1|2e-37hypothetical protein MIMGU_mgv1a016097mg [Erythranthe guttata]603002578 (2)gb|EYU31998.1|3e-54hypothetical protein MIMGU_mgv1a016097mg [Erythranthe guttata]

Alignment

This contig is upended


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JMFF021E06-                                                       GAATCTCGGACATCTC
                      ____________________________________________________________
consensus                                                         GAATCTCGGACATCTC
 
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JMFF021E06-           ACCAACGGCTACGGTGAAATAGTCAAATAGGTCACCGTTTCCCGGAACGGCAACTACTCC
                      ____________________________________________________________
consensus             ACCAACGGCTACGGTGAAATAGTCAAATAGGTCACCGTTTCCCGGAACGGCAACTACTCC
 
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JMFF021E06-           GACAAGACGCCGAGAAAAAAGGGGGCGAGCGAGGGAAAGAAACTAAGCAGAGGAGGAAGG
                      ____________________________________________________________
consensus             GACAAGACGCCGAGAAAAAAGGGGGCGAGCGAGGGAAAGAAACTAAGCAGAGGAGGAAGG
 
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JMFF021E06-           AGCGCGAGGGGCCATGGTGGATCTCTTTGCATGGCTTCTTTCCTTCTTCCTTCTAGTGGC
rJMFF021E06+                                                                   GGC
                      ____________________________________________________________
consensus             AGCGCGAGGGGCCATGGTGGATCTCTTTGCATGGCTTCTTTCCTTCTTCCTTCTAGTGGC
 
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JMFF021E06-           CATTCTTGGTCTTCTCCTTTACCAGCTAATGTGCTTAGCTGACCTTGAGTACGATTATAT
rJMFF021E06+          CATTCTTGGTCTTCTCCTTTACCAGCTAATGTGCTTAGCTGACCTTGAGTACGATTATAT
                      ____________________________________________________________
consensus             CATTCTTGGTCTTCTCCTTTACCAGCTAATGTGCTTAGCTGACCTTGAGTACGATTATAT
 
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JMFF021E06-           CAACCCATACGATTCAGCATCCCGGATAAATAAAGTTGTCGTGCCCAGTTTTATTGCTGA
rJMFF021E06+          CAACCCATACGATTCAGCATCCCGGATAAATAAAGTTGTCGTGCCCAGTTTTATTGCTGA
                      ____________________________________________________________
consensus             CAACCCATACGATTCAGCATCCCGGATAAATAAAGTTGTCGTGCCCAGTTTTATTGCTGA
 
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JMFF021E06-           AGGGATGCTATGTATCCTACATCTTATAGTAGGCCATTGGTTTATGTGTCTTCTCTGTCT
rJMFF021E06+          AGGGATGCTATGTATCCTACATCTTATAGTAGGCCATTGGTTTATGTGTCTTCTCTGTCT
                      ____________________________________________________________
consensus             AGGGATGCTATGTATCCTACATCTTATAGTAGGCCATTGGTTTATGTGTCTTCTCTGTCT
 
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JMFF021E06-           CCCATATTTGTACTACAACTTCAAAGTCTATACTCGTGGTCGCCACTTGTTGGATGTGAC
rJMFF021E06+          CCCATATTTGTACTACAACTTCAAAGTCTATACTCGTGGTCGCCACTTGTTGGATGTGAC
                      ____________________________________________________________
consensus             CCCATATTTGTACTACAACTTCAAAGTCTATACTCGTGGTCGCCACTTGTTGGATGTGAC
 
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JMFF021E06-           GGAAATTTTCA                                                 
rJMFF021E06+          GGAAATTTTCAATCAACTTCCCTGGGAAAAGAAGATACGGTTGTATAAACTTGGATACCT
                      ____________________________________________________________
consensus             GGAAATTTTCAATCAACTTCCCTGGGAAAAGAAGATACGGTTGTATAAACTTGGATACCT
 
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rJMFF021E06+          GGTCTTACTTCTTGCAGTTTCCATAACCTGGATGGTATGGACCATAGTGGATGATTAAGC
                      ____________________________________________________________
consensus             GGTCTTACTTCTTGCAGTTTCCATAACCTGGATGGTATGGACCATAGTGGATGATTAAGC
 
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rJMFF021E06+          AAGTAGCGGTGCTTCTACTTAGGGTTGTGTGGCTTCTTTGAGCATTATCATCACTCTCTG
                      ____________________________________________________________
consensus             AAGTAGCGGTGCTTCTACTTAGGGTTGTGTGGCTTCTTTGAGCATTATCATCACTCTCTG
 
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rJMFF021E06+          CTCTGAGTATTTGTGTTTTGTAAAAGGTTCAAAATCTCCAGTTCAAGGCAGCCAGTCTGG
                      ____________________________________________________________
consensus             CTCTGAGTATTTGTGTTTTGTAAAAGGTTCAAAATCTCCAGTTCAAGGCAGCCAGTCTGG
 
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rJMFF021E06+          CAGGCACCTGTTTTTTGTAATGAAATGTATTATGAGAAAGTAATTTTCATAGTTTTCAGT
                      ____________________________________________________________
consensus             CAGGCACCTGTTTTTTGTAATGAAATGTATTATGAGAAAGTAATTTTCATAGTTTTCAGT
 
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rJMFF021E06+          TATGTATTAGTAAGCTTTTTCCCCATAAACTCATTCTTGTATTCCAACAGCAACTTTATG
                      ____________________________________________________________
consensus             TATGTATTAGTAAGCTTTTTCCCCATAAACTCATTCTTGTATTCCAACAGCAACTTTATG