| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF020O20 | Sequence | 563 | 010488 (95) | gb|EPS59999.1| | 3e-09 | hypothetical protein M569_14806, partial [Genlisea aurea] | 736 | 002577 (3) | ref|XP_006365218.1| | 8e-80 | PREDICTED: RNA-binding protein 25-like isoform X5 [Solanum tuberosum] |
| JMFF035O03 | Sequence | 556 | 010488 (95) | gb|EPS59999.1| | 3e-09 | hypothetical protein M569_14806, partial [Genlisea aurea] | 712 | 002577 (3) | ref|XP_006365218.1| | 3e-79 | PREDICTED: RNA-binding protein 25-like isoform X5 [Solanum tuberosum] |
| JMSF047L11 | Sequence | 642 | 006718 (4) | ref|XP_011087086.1| | 2e-10 | PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 25 [Sesamum indicum] | 723 | 002577 (3) | ref|XP_006365218.1| | 7e-80 | PREDICTED: RNA-binding protein 25-like isoform X5 [Solanum tuberosum] |
This contig is upended
. : . : . : . : . : . :
rJMSF047L11+ TTTCTGAAGCACCCTA
rJMFF020O20+ TTTCTGAAGCACCCTA
____________________________________________________________
consensus TTTCTGAAGCACCCTA
. : . : . : . : . : . :
rJMSF047L11+ TTTGATCTCAACTACAGCAATAGAAACTGCAAAACGTATTTCTAATGTTAACTCTAAAGA
rJMFF035O03+ TCAACTACAGCAATAGAAACTGCAAAACGTATTTNTAATGTTAACTCTAAAGA
rJMFF020O20+ TTTGATCTCAACTACAGCAATAGAAACTGCAAAACGTATTTCTAATGTTAACTCTAAAGA
____________________________________________________________
consensus TTTGATCTCAACTACAGCAATAGAAACTGCAAAACGTATTTCTAATGTTAACTCTAAAGA
. : . : . : . : . : . :
rJMSF047L11+ GGATAGGCTGGATGCAGAAAAGGATAGAAGTAGAAGGTCTCATGAAAGATCTAGTCATCG
rJMFF035O03+ GGATAGGCTGGATGCAGAAAAGGATAGAAGCAGAAGGTCTCATGAAAGATCTAGTCATCG
rJMFF020O20+ GGATAGGCTGGATGCAGAAAAGGATAGAAGCAGAAGGTCTCATGAAAGATCTAGTCATCG
____________________________________________________________
consensus GGATAGGCTGGATGCAGAAAAGGATAGAAGCAGAAGGTCTCATGAAAGATCTAGTCATCG
. : . : . : . : . : . :
rJMSF047L11+ GGAACGTGAAAGGCATGATGAAGAGAGCCGAAAGGAAAATGTTGACCATGACCGAGCTCG
rJMFF035O03+ GGAACGTGAAAGGCATGATGAAGAGAGCCGAAAGGAAAATGTTGACCATGACCGAGCTCG
rJMFF020O20+ GGAACGTGAAAGGCATGATGAAGAGAGCCGAAAGGAAAATGTTGACCATGACCGAGCTCG
____________________________________________________________
consensus GGAACGTGAAAGGCATGATGAAGAGAGCCGAAAGGAAAATGTTGACCATGACCGAGCTCG
. : . : . : . : . : . :
rJMSF047L11+ GGAACATAGGCCTGAAAAAACGCGGACTCCAGATAATCAGAAGCTTTTAGATGCAAAACA
rJMFF035O03+ GGAACATAGGCCTGAAAAAACGCGGACTCCAGATAATCAGAAGCTTTTAGATGCAAAACA
rJMFF020O20+ GGAACATAGGCCTGAAAAAACGCGGACTCCAGATAATCAGAAGCTTTTAGATGCAAAACA
____________________________________________________________
consensus GGAACATAGGCCTGAAAAAACGCGGACTCCAGATAATCAGAAGCTTTTAGATGCAAAACA
. : . : . : . : . : . :
rJMSF047L11+ ACTGATCGATATGATTCCAAAGACTAAAAATGAGTTGTTTTCGTACGAGATAAATTGGGC
rJMFF035O03+ ACTGATCGATATGATTCCAAAGACTAAAAATGAGTTGTTTTCGTACGAGATAAATTGGGC
rJMFF020O20+ ACTGATCGATATGATTCCAAAGACTAAAAATGAGTTGTTTTCGTACGAGATAAATTGGGC
____________________________________________________________
consensus ACTGATCGATATGATTCCAAAGACTAAAAATGAGTTGTTTTCGTACGAGATAAATTGGGC
. : . : . : . : . : . :
rJMSF047L11+ TATCTATGACAAGAATGAACTGCATGAGAGAATGAGGCCATGGATTGCTAAGAAGATTAC
rJMFF035O03+ TATCTATGACAAGAATGAACTGCATGAGAGAATGAGGCCATGGATTGCTAAGAAGATTAC
rJMFF020O20+ TATCTATGACAAGAATGAACTGCATGAGAGAATGAGGCCATGGATTGCTAAGAAGATTAC
____________________________________________________________
consensus TATCTATGACAAGAATGAACTGCATGAGAGAATGAGGCCATGGATTGCTAAGAAGATTAC
. : . : . : . : . : . :
rJMSF047L11+ AGAATTTCTGGGAGAGGAGGAACCCACATTGGTAGACTATATAGTCTCCAGCACTCAAGA
rJMFF035O03+ AGAATTTCTGGGAGAGGAGGAACCCACATTGGTAGACTATATAGTCTCCAGCACTCAAGA
rJMFF020O20+ AGAATTTCTGGGAGAGGAGGAACCCACATTGGTAGACTATATAGTCTCCAGCACTCAAGA
____________________________________________________________
consensus AGAATTTCTGGGAGAGGAGGAACCCACATTGGTAGACTATATAGTCTCCAGCACTCAAGA
. : . : . : . : . : . :
rJMSF047L11+ ACACGTGAAGGCGGCTGAGATGCTGGAGAGACTGCAAGCAATATTAGATGAAGAAGCCGA
rJMFF035O03+ ACACGTGAAGGCGGCTGAGATGCTGGAGAGACTGCAAGCAATATTAGATGAAGAAGCCGA
rJMFF020O20+ ACACGTGAAGGCGGCTGAGATGCTGGAGAGACTGCAAGCAATATTAGATGAAGAAGCCGA
____________________________________________________________
consensus ACACGTGAAGGCGGCTGAGATGCTGGAGAGACTGCAAGCAATATTAGATGAAGAAGCCGA
. : . : . : . : . : . :
rJMSF047L11+ AATGTTTGTTTTGAAGATGTGGAGGATGCTCATCTTTGAAGTCAAGAAAGTTGAAACTGG
rJMFF035O03+ AATGTTTGTTTTGAAGATGTGGAGGATGCTCATCTTTGAAGTCAAGAAAGTTGAAACTGG
rJMFF020O20+ AATGTTTGTTTTGAAGATGTGGAGGATGCTCATCTTTGAAGTCAAGAAAGTTGAAACTGG
____________________________________________________________
consensus AATGTTTGTTTTGAAGATGTGGAGGATGCTCATCTTTGAAGTCAAGAAAGTTGAAACTGG
. : . : . : . : . : . :
rJMSF047L11+ TTTGGCTTCCAGGTCTAAGTCTTAATTTTGTTTCCTGTTTATTTTCATATCATGTTTGTT
rJMFF035O03+ TTTGGCTTCCAGGTCTAAGTCTTAATTTTGTTTCCTGTTTATTTTCATATCATGTTTGTT
rJMFF020O20+ TTTGGCTTCCAGGTCTAAGTCTTAATTTTGTTTCCTGTTTATTTTCATATCATGTTTGTT
____________________________________________________________
consensus TTTGGCTTCCAGGTCTAAGTCTTAATTTTGTTTCCTGTTTATTTTCATATCATGTTTGTT
. : . : . : . : . : . :
rJMSF047L11+ GTCTTGGAGCCATATCTCTGTGTACTAGTATTTTCCTTTCTTTTTTGCCCCCTNGACTCC
rJMFF035O03+ GTCTTGGAGCCATATCTCTGTGTACTAGTATTTTCCTTTCTTTTTTGCCCCCTTGACTCC
rJMFF020O20+ GTCTTGGAGCCATATCTCTGTGTACTAGTATTTTCCTTTCTTTTTTGCCCCCTTGACTCC
____________________________________________________________
consensus GTCTTGGAGCCATATCTCTGTGTACTAGTATTTTCCTTTCTTTTTTGCCCCCTTGACTCC
. : . : . : . : . : . :
rJMSF047L11+ TGGAAAATCACATTGCTACAGGACCTAAATGATGGANAACACAATAA
rJMFF035O03+ TGGAAAATCACATTGCTACAGGACCTAAATGATGGAAAACACAATAATACTTGCTCATT
rJMFF020O20+ TGGAAAATCACATTGCTACAGGACCTAAATGATGGAAAACACAATAATACTTGCTCATTT
____________________________________________________________
consensus TGGAAAATCACATTGCTACAGGACCTAAATGATGGAAAACACAATAATACTTGCTCATTT