Contig 002574:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF019A24Sequence537021663ref|XP_009775045.1|1e-42PREDICTED: chitin elicitor receptor kinase 1 isoform X2 [Nicotiana sylvestris]766002574 (2)gb|AIT39749.1|8e-122chitin elicitor receptor kinase 1 [Chrysanthemum boreale]
JMFN028D01Sequence527002574 (2)ref|XP_009623603.1|1e-44PREDICTED: chitin elicitor receptor kinase 1-like isoform X2 [Nicotiana tomento

Alignment

This contig is upended


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JMFN028D01+                   TACAAATCCAAGATTTGAATCTATATGATCCGCAATGAAGGTGAATATTTAG
                      ____________________________________________________________
consensus                     TACAAATCCAAGATTTGAATCTATATGATCCGCAATGAAGGTGAATATTTAG
 
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JMFN028D01+           AGTACATAGTAGAGATGGGTGGGACAGAGTATTCTTAATTCTTCCCACAGCGCTGCAGAT
rJMFF019A24-                       GATGGGTGGGACAGAGTATTCTTAATTCTTCCCACAGCGATGCAGAT
                      ____________________________________________________________
consensus             AGTACATAGTAGAGATGGGTGGGACAGAGTATTCTTAATTCTTCCCACAGCGCTGCAGAT
 
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JMFN028D01+           TTATTCCACTCATCAGGCTGTTACGCAGTATTATATACAAACAAAAAATGTGGTAAATAA
rJMFF019A24-          TTATTCCACTCATCAAACTGTTACACAGTATTATATACAAACAAAAAATGTGGTAAATAA
                      ____________________________________________________________
consensus             TTATTCCACTCATCAGGCTGTTACGCAGTATTATATACAAACAAAAAATGTGGTAAATAA
 
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JMFN028D01+           TGCAAAGATACACAACAACACTGTAAATGAAATGTTGGTCCATTTTACAAATACCAACCA
rJMFF019A24-          TGCAAAGATACACAACAACACTGTAAATGAAATGTTGGTCCATTTTACAAATACCAACCA
                      ____________________________________________________________
consensus             TGCAAAGATACACAACAACACTGTAAATGAAATGTTGGTCCATTTTACAAATACCAACCA
 
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JMFN028D01+           GAGTGTTACTATACTATCTTCCAGACATGAGATTTATGAGGCCTTGGTTTCCATAGAAGG
rJMFF019A24-          GAGTGTTACTATACTATCTTCCAGACATGAGATTTATGAGGCCTTGGTTTCCATAGAAGG
                      ____________________________________________________________
consensus             GAGTGTTACTATACTATCTTCCAGACATGAGATTTATGAGGCCTTGGTTTCCATAGAAGG
 
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JMFN028D01+           CGCCCACATCCCAATCCTCTGTTGACGACGATAGTGTCATCAGAGCCACCACTATCGACC
rJMFF019A24-          CGCCCACATCCCAATCCTCTGTTGACGACGATAGTGTCATCAGAGCCACCACTATCGACC
                      ____________________________________________________________
consensus             CGCCCACATCCCAATCCTCTGTTGACGACGATAGTGTCATCAGAGCCACCACTATCGACC
 
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JMFN028D01+           TCATGCTTGGCCGTATTTGAGGGTTCTCGTGAGTGCAAGCTTTCGCAAGCTGCGCCATCT
rJMFF019A24-          TCATGCTTGGCCGTATTTGAGGGTTCTCGTGAGTGCAAGCTTTCGCAAGCTGCGCCATCT
                      ____________________________________________________________
consensus             TCATGCTTGGCCGTATTTGAGGGTTCTCGTGAGTGCAAGCTTTCGCAAGCTGCGCCATCT
 
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JMFN028D01+           TTCGGACCGAGTCCAATGGGTAGGTGTCTCCAAGTCTAGGGTCAACCAGCGGTCGAATGT
rJMFF019A24-          TTCGGACCGAGTCCAATGGGTAGGTGTCTCCAAGTCTAGGGTCAACCAGCGGTCGAATGT
                      ____________________________________________________________
consensus             TTCGGACCGAGTCCAATGGGTAGGTGTCTCCAAGTCTAGGGTCAACCAGCGGTCGAATGT
 
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JMFN028D01+           CATCGTTGGGCTCGGGTTGATTGAGGAGCTTCTTCAAACAAAGCAACTAGGCCTT     
rJMFF019A24-          CATCGTTGGGCTCGGGTTGATTGAGGA-CTTCTTCAAACAAAGCAACTAGGCCTTTTGAC
                      ____________________________________________________________
consensus             CATCGTTGGGCTCGGGTTGATTGAGGAGCTTCTTCAAACAAAGCAACTAGGCCTTTTGAC
 
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rJMFF019A24-          TCGGCTACAGAACCGTTTGCCTTCACTATAGCTTCCTTGCCGGAAATTAACTCATAAAGA
                      ____________________________________________________________
consensus             TCGGCTACAGAACCGTTTGCCTTCACTATAGCTTCCTTGCCGGAAATTAACTCATAAAGA
 
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rJMFF019A24-          ACAACTCCAAAAGCATACACATCAACTTTGGGAGAGACGTCTCCGTACTGAGCATACTCT
                      ____________________________________________________________
consensus             ACAACTCCAAAAGCATACACATCAACTTTGGGAGAGACGTCTCCGTACTGAGCATACTCT
 
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rJMFF019A24-          GGGGGCATGTACCCAAATGTACCAACCAAACGTGTCGGCAAAGATGAACTTCCAACTTCA
                      ____________________________________________________________
consensus             GGGGGCATGTACCCAAATGTACCAACCAAACGTGTCGGCAAAGATGAACTTCCAACTTCA
 
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rJMFF019A24-          GTCAGTTTCGTTAAACCAAAATCAGCAACCTTTGCGTGGAAGCTTTTGTCTATTAAGATA
                      ____________________________________________________________
consensus             GTCAGTTTCGTTAAACCAAAATCAGCAACCTTTGCGTGGAAGCTTTTGTCTATTAAGATA
 
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rJMFF019A24-          TTTGCTGGTTTAATATCGCGATGGATGTATACAGGAACCGTATGCTCGTGTATATATTCA
                      ____________________________________________________________
consensus             TTTGCTGGTTTAATATCGCGATGGATGTATACAGGAACCGTATGCTCGTGTATATATTCA