| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF018L21 | Sequence | 559 | 001673 (3) | ref|XP_009619672.1| | 7e-106 | PREDICTED: 6-phosphogluconate dehydrogenase, decarboxylating 1 [Nicotiana tomen | 814 | 002572 (3) | ref|XP_009774328.1| | 5e-103 | PREDICTED: 6-phosphogluconate dehydrogenase, decarboxylating 3 [Nicotiana sylve |
| JMFF022L17 | Sequence | 554 | 001673 (3) | ref|XP_009619672.1| | 1e-104 | PREDICTED: 6-phosphogluconate dehydrogenase, decarboxylating 1 [Nicotiana tomen | 789 | 002572 (3) | ref|XP_009774328.1| | 1e-101 | PREDICTED: 6-phosphogluconate dehydrogenase, decarboxylating 3 [Nicotiana sylve |
| JMFF034D15 | Sequence | 465 | 001673 (3) | ref|XP_009619672.1| | 5e-85 | PREDICTED: 6-phosphogluconate dehydrogenase, decarboxylating 1 [Nicotiana tomen | 671 | 002572 (3) | ref|XP_009774328.1| | 1e-83 | PREDICTED: 6-phosphogluconate dehydrogenase, decarboxylating 3 [Nicotiana sylve |
This contig is upended
. : . : . : . : . : . :
rJMFF022L17+ TTCCTCAGTGGATTGAAGGACGAGAGAGTC
rJMFF018L21+ GAGGTTCCTCAGTGGATTGAAGGACGAGAGAGTC
____________________________________________________________
consensus GAGGTTCCTCAGTGGATTGAAGGACGAGAGAGTC
. : . : . : . : . : . :
rJMFF022L17+ GAAGCCGCCAATTTATTTAAATCCGGTGGCATTGACAATACCATTGACAACAACAACGTT
rJMFF018L21+ GAAGCCGCCAATTTATTTAAATCCGGTGGCATTGACAATACCATTGACAACAACAACGTT
____________________________________________________________
consensus GAAGCCGCCAATTTATTTAAATCCGGTGGCATTGACAATACCATTGACAACAACAACGTT
. : . : . : . : . : . :
rJMFF022L17+ GTTGACAAGAAACAACTAATCGATGATGTTCGGAAGGCGCTTTACGCGTCCAAAATCTGC
rJMFF034D15+ CCAAAATCTGC
rJMFF018L21+ GTTGACAAGAAACAACTAATCGATGATGTTCGGAAGGCGCTTTACGCGTCCAAAATCTGC
____________________________________________________________
consensus GTTGACAAGAAACAACTAATCGATGATGTTCGGAAGGCGCTTTACGCGTCCAAAATCTGC
. : . : . : . : . : . :
rJMFF022L17+ AGCTATGCACAGGGAATGAACTTGATTCGTGCAAAGAGTATCGAACAAGGTTGGGGGTTG
rJMFF034D15+ AGCTATGCACAGGGAATGAACTTGATTCGTGCAAAGAGTATCGAACAAGGGTGGGGGTTG
rJMFF018L21+ AGCTATGCACAGGGAATGAACTTGATTCGTGCAAAGAGTATCGAACAAGGGTGGGGGTTG
____________________________________________________________
consensus AGCTATGCACAGGGAATGAACTTGATTCGTGCAAAGAGTATCGAACAAGGGTGGGGGTTG
. : . : . : . : . : . :
rJMFF022L17+ AAGCTCGGGGAGCTAGCGAGAATCTGGAAGGGCGGGTGCATAATTCGCGCTATATTTTTG
rJMFF034D15+ AAGCTCGGGGAGCTAGCGAGAATCTGGAAGGGCGGGTGCATAATTCGCGCTATATTTTTG
rJMFF018L21+ AAGCTCGGGGAGCTAGCGAGAATCTGGAAGGGCGGGTGCATAATTCGCGCTATATTTTTG
____________________________________________________________
consensus AAGCTCGGGGAGCTAGCGAGAATCTGGAAGGGCGGGTGCATAATTCGCGCTATATTTTTG
. : . : . : . : . : . :
rJMFF022L17+ GATCGTATCAAGCAGGCTTATGACAGAAACCCGGAACTCGCTAACCTACTCGTGGACGAA
rJMFF034D15+ GATCGTATCAAGCAGGCTTATGACAGAAACCCGGAACTCGCTAACCTACTCGTGGACGAA
rJMFF018L21+ GATCGTATCAAGCAGGCTTATGACAGAAACCCGGAACTCGCTAACCTACTCGTGAACGAA
____________________________________________________________
consensus GATCGTATCAAGCAGGCTTATGACAGAAACCCGGAACTCGCTAACCTACTCGTGGACGAA
. : . : . : . : . : . :
rJMFF022L17+ GAGTTTGCGAAGGAGATAATCGAACGGCAGTCCGCTTGGCGAAGAGTTGTGTGCCTCGCT
rJMFF034D15+ GAGTTTGCGAAGGAGATAATCGAACGGCAGTCCGCTTGGCGAAGAGTTGTGTGCCTCGCT
rJMFF018L21+ GAGTTTGCGAAGGAGATAATCGAACGGCAGTCCGCTTGGCGAAGAGTTGTGTGCCTCGCT
____________________________________________________________
consensus GAGTTTGCGAAGGAGATAATCGAACGGCAGTCCGCTTGGCGAAGAGTTGTGTGCCTCGCT
. : . : . : . : . : . :
rJMFF022L17+ ATCAGCTCGGGTATTAGCACTCCCGGTATGTCTTCGAGTTTAGCTTATTTCGACACTTAT
rJMFF034D15+ ATCAGCTCGGGTATTAGCACTCCCGGTATGTCTTCGAGTTTAGCTTATTTCGACACTTAT
rJMFF018L21+ ATCAGCTCGGGTATTAGCACTCCCGGTATGTCTTCGAGTTTAGCTTATTTCGACACTTAT
____________________________________________________________
consensus ATCAGCTCGGGTATTAGCACTCCCGGTATGTCTTCGAGTTTAGCTTATTTCGACACTTAT
. : . : . : . : . : . :
rJMFF022L17+ AGGAGGGAAAGATTGCCCGCGATTTTGGTTCAAGCTCAGAGGGATTACTTTGGTGCCCAC
rJMFF034D15+ AGGAGGGAAAGATTGCCCGCGAATTTGGTTCAAGCTCAGAGGGATTACTTTGGTGCCCAC
rJMFF018L21+ AGGAGGGAAAGATTGCCCGCGAATTTGGTTCAAGCTCAGAGGGATTACTTTGGTGCCCAC
____________________________________________________________
consensus AGGAGGGAAAGATTGCCCGCGAATTTGGTTCAAGCTCAGAGGGATTACTTTGGTGCCCAC
. : . : . : . : . : . :
rJMFF022L17+ ACTTATGAGAGAATTGACATGCCAGGCTCCTTCCATACTGAGTGGTTCAAGATTGCCCAA
rJMFF034D15+ ACTTATGAGAGAATTGACATGCCAGGCTCCTTCCATACTGAGTGGTTCAAGATTGCCCAA
rJMFF018L21+ ACTTATGAGAGAATTGACATGCCAGGCTCCTTCCATACTGAGTGGTTCAAGATTGCCCAA
____________________________________________________________
consensus ACTTATGAGAGAATTGACATGCCAGGCTCCTTCCATACTGAGTGGTTCAAGATTGCCCAA
. : . : . : . : . : . :
rJMFF022L17+ CAATCTAAGATATAATATGGGATTTTCTTAAACTTTGTGTTGAACTCTTTGTTTTTGTAC
rJMFF034D15+ CAATCTAAGATATAATATGGGATTTTCTTAAACTTTGTGTTGAACTCTTTGTTTTTGTAC
rJMFF018L21+ CAATCTAAGATATAATATGGGATTTTCTTAAACTTTGTGTTGAACTCTTTGTTTTTGTAC
____________________________________________________________
consensus CAATCTAAGATATAATATGGGATTTTCTTAAACTTTGTGTTGAACTCTTTGTTTTTGTAC
. : . : . : . : . : . :
rJMFF022L17+ TGAATAATAAGGATTCATTGTGGCTGGAAATGTTAACTTGGAATCTTCCAACCAGACCCT
rJMFF034D15+ TGAATAATAAGGATTCATTGTGGCTGGAAATGTTAACTTGGAATCTTCCAACCAGACCCT
rJMFF018L21+ TGAATAATAAGGATTCATTGTGGCTGGAAATGTTAACTTGGAATCTTCCAACCAGACCCT
____________________________________________________________
consensus TGAATAATAAGGATTCATTGTGGCTGGAAATGTTAACTTGGAATCTTCCAACCAGACCCT
. : . : . : . : . : . :
rJMFF022L17+ CTTTAATATTTTTGGTATATTTGCATTTTGTCCAAGTTTGTTTTGTTTTGTTTTGTTTTT
rJMFF034D15+ CTTTAATATTTTTGGTATATTTGCATTTTGTCCAAGTTTGTTTTGTTTTGTTTTGTTTTT
rJMFF018L21+ CTTTAATATTTTTGGTATATTTGCATTTTGTCCAAGTTTGTTTTGTTTTGTTTTGTTTTT
____________________________________________________________
consensus CTTTAATATTTTTGGTATATTTGCATTTTGTCCAAGTTTGTTTTGTTTTGTTTTGTTTTT
. : . : . : . : . : . :
rJMFF022L17+ ATGAAGTATTTGTAAACCAGACCACTTTCTTTT
rJMFF034D15+ ATGAAGTATTTGTAAACCAGACCACTTTCTTTTTCTCAATACAATAAAATCAATCAGACC
rJMFF018L21+ ATGAAGTATTTGTAAACCAGACCACTTTCTTTTTCTCAATACAATAAAATCAATCAGACC
____________________________________________________________
consensus ATGAAGTATTTGTAAACCAGACCACTTTCTTTTTCTCAATACAATAAAATCAATCAGACC