Contig 002567:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF017M23Sequence526003141 (14)171002567 (3)
JMFF031C18Sequence496003141 (14)503002567 (3)gb|KDP38139.1|5e-22hypothetical protein JCGZ_04782 [Jatropha curcas]
JMFF035B22Sequence565021694ref|XP_002527520.1|1e-106trehalose-6-phosphate synthase, putative [Ricinus communis] gb|EEF34829.1| treha167002567 (3)

Alignment

This contig is upended


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rJMFF031C18+                                            GTNNGAATTCCGTGGAANTTNANCCC
                      ____________________________________________________________
consensus                                               GTNNGAATTCCGTGGAANTTNANCCC
 
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rJMFF031C18+          CNGGGNNTGAGCAAAGGGNTTNNGGGGAAANGCCTNCTTTNCCTGANGCAAGAGAGGGAG
                      ____________________________________________________________
consensus             CNGGGNNTGAGCAAAGGGNTTNNGGGGAAANGCCTNCTTTNCCTGANGCAAGAGAGGGAG
 
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rJMFF031C18+          ANNTNGCCGGATTTTGTTTTGTGCATNGGNGATGNCCGATTGGNCGAANACATNTTTGNG
                      ____________________________________________________________
consensus             ANNTNGCCGGATTTTGTTTTGTGCATNGGNGATGNCCGATTGGNCGAANACATNTTTGNG
 
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rJMFF031C18+          GNGATTNTGAATTNGGNGGGTANCCCGTCCNTGGCCCCGAGTGCAGAANNGTTTNNTTNC
                      ____________________________________________________________
consensus             GNGATTNTGAATTNGGNGGGTANCCCGTCCNTGGCCCCGAGTGCAGAANNGTTTNNTTNC
 
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rJMFF031C18+          CCGGNGGGTAAAAANCCGNGCAAGGGGAAATTNTTCCTGGATGATNCGGTTGAAATTGTG
                      ____________________________________________________________
consensus             CCGGNGGGTAAAAANCCGNGCAAGGGGAAATTNTTCCTGGATGATNCGGTTGAAATTGTG
 
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rJMFF031C18+          AGGNTNANGCAGGGNTTGGCANGTGTTGCAGAACAACAACAAACGGCCCTTTTNTNAATN
                      ____________________________________________________________
consensus             AGGNTNANGCAGGGNTTGGCANGTGTTGCAGAACAACAACAAACGGCCCTTTTNTNAATN
 
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rJMFF031C18+          TNTGAANGAANGAAGATATGGTTCCTTNCANGTNGGCAGAGAGANCCNGGATGGTTTTTG
rJMFF035B22+                                                          GGATGGTTTTTG
rJMFF017M23+                       AGATNTGGTTCCTTNCANGTNGGCNGAGAGANCCNGGATGGTTTTTG
                      ____________________________________________________________
consensus             TNTGAANGAANGAAGATATGGTTCCTTNCANGTNGGCAGAGAGANCCNGGATGGTTTTTG
 
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rJMFF031C18+          GAAGANTTTGTAAANTTCTCCGTNNTAAAAAAAAAAAAGTATTTAGATTGTGAGGAAACA
rJMFF035B22+          GAANANTTTNTAAANTTCTCCGTTNTAAAAAAAAAAAAGTATTTAGATTGTGAGGAAACA
rJMFF017M23+          GAANANTTTGTAAANTTCTCCGTTCTAAAAAAAAAAAAGTATTTAGATTGTGAGGAAACA
                      ____________________________________________________________
consensus             GAAGANTTTGTAAANTTCTCCGTTCTAAAAAAAAAAAAGTATTTAGATTGTGAGGAAACA
 
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rJMFF031C18+          TTGAATGTTACTTACATGTTATTGTTTTGGATTTCTTCAGATGTTTGGTTAAAAACT   
rJMFF035B22+          TTGAATGTTACTTACATGTTATTGTTTTGGATTTCTTCAGATGTTTGGTTAAAAACTT  
rJMFF017M23+          TTGAATGTTACTTACATGTTATTGTTTTGGATTTCTTCAGATGTTTGGTTAAAAACTTAT
                      ____________________________________________________________
consensus             TTGAATGTTACTTACATGTTATTGTTTTGGATTTCTTCAGATGTTTGGTTAAAAACTTAT